CX287206

Overview
NameCX287206
Unique NameCX287206
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig39 contig Ccv1_Contig39:1..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CRK2_ARATH (Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=CRK2 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.887e-17
Identity = 66/204 (32.35%), Postives = 93/204 (45.59%), Query Frame = 2
Query:   47 ELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSDASN-SGSSAATCAYDVYCFGKVLLELVTGKLGISK-----SDDATTREWLEHTLPHITLHDKEMLTKIIDPSL 640
            E+++ S V H  LV LLG C     E LLVY+Y+    L   +  V     +  ++LDW  R  I +G AEGL YLH + +  ++HRD++AS+ILLD K + ++       +  D   ++ T         A         T   DVY FG ++LE+VTGK          SD   T  W               L KI DP+L
Sbjct:  369 EVNMISTVEHKNLVRLLG-CSCSGPESLLVYEYLQNKSLDRFIFDV-----NRGKTLDWQRRYTIIVGTAEGLVYLHEQSSVKIIHRDIKASNILLDSKLQAKIADFGLARSFQDDKSHISTAIAGTLGYMAPEYLAHGQLTEMVDVYSFGVLVLEIVTGKQNTKSKMSDYSDSLITEAWKH--------FQSGELEKIYDPNL 558          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CRK27_ARATH (Cysteine-rich receptor-like protein kinase 27 OS=Arabidopsis thaliana GN=CRK27 PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.030e-16
Identity = 70/246 (28.46%), Postives = 120/246 (48.78%), Query Frame = 2
Query:    2 KKVSLHSFKKES-YMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTR-----FLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGK----LGISKSDDATT---REWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            K++S+HS +  + +  E+ L +++ H  LV L G  ++ E+E+LLVY+++    L   L      +    + LDW  R  I +G + GL YLH     P++HRD+++S++LLD++   ++            +   +TR     + +     A +   S  T   DVY FG ++LE++TGK    LG+ +  D  T   + W+E T             ++IDP L+   D  E +  + I A SC
Sbjct:  361 KRLSIHSGQGNAEFKTEVLLMTKLQHKNLVKLFGFSIK-ESERLLVYEFIPNTSLDRFL-----FDPIKQKQLDWEKRYNIIVGVSRGLLYLHEGSEFPIIHRDLKSSNVLLDEQMLPKISDFGMARQFDFDNTQAVTRRVVGTYGYMAPEYAMHGRFSVKT---DVYSFGVLVLEIITGKRNSGLGLGEGTDLPTFAWQNWIEGT-----------SMELIDPVLLQTHDKKESMQCLEI-ALSC 585          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y5694_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 OS=Arabidopsis thaliana GN=At5g06940 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.345e-16
Identity = 60/192 (31.25%), Postives = 97/192 (50.52%), Query Frame = 2
Query:    2 KKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSDA-SNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLE 574
            K V+  +   +S   ++   +++ H  +  +LG C + E    L+Y++   G L   L R  D        L W  RLKIA+G A+ L+Y+  +  P L+HR++++++I LD  FE +L   +  H  G++    L          A  N  S  AT   DVY FG VLLELVTG+    K+++ ++ E L+
Sbjct:  618 KLVNSKNISSKSLKAQVRTIAKIRHKNITRILGFCFKDEMI-FLIYEFTQNGSLHDMLSRAGD-------QLPWSIRLKIALGVAQALAYISKDYVPHLLHRNLKSANIFLDKDFEPKLSDFALDHIVGETAFQSLVHANTNSCYTAPENHYSKKATEDMDVYSFGVVLLELVTGQ-SAEKAEEGSSGESLD 800          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.345e-16
Identity = 61/182 (33.52%), Postives = 98/182 (53.85%), Query Frame = 2
Query:    2 KKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQS-LDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL--DDKFEVRLGSLS----ELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGK 526
            KK+  +      ++ ++ + SR+ H   V LLG C++  + ++L Y++   G L   LH    ++       L W  R+KIA+GAA GL YLH + NP ++HRD+++S++LL  DD  ++    LS    ++ A+  S   VL  F +     A     +A +   DVY FG VLLEL+TG+
Sbjct:  101 KKLDSNKQPDNEFLAQVSMVSRLKHDNFVQLLGYCVDGNS-RILSYEFANNGSLHDILHGRKGVKGAQPGPVLSWYQRVKIAVGAARGLEYLHEKANPHIIHRDIKSSNVLLFEDDVAKIADFDLSNQAPDMAARLHS-TRVLGTFGYHAPEYAMTGQLNAKS---DVYSFGVVLLELLTGR 277          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.345e-16
Identity = 56/186 (30.11%), Postives = 98/186 (52.69%), Query Frame = 2
Query:   29 KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSDASN-SGSSAATCAYDVYCFGKVLLELVTGKLGISKS---DDATTREWLE 574
            ++ + +E+++  RV H  LV LLG C+E    ++LVY ++  G+L   +H   D+ D S   L W  R+ I +G A+GL+YLH    P +VHRD+++S+ILLD ++  ++         G     V TR +      A   + +       D+Y FG +++E++TG+  +  S    +    +WL+
Sbjct:  192 EKEFKVEVEVIGRVRHKNLVRLLGYCVEG-AYRMLVYDFVDNGNLEQWIHG--DVGDVS--PLTWDIRMNIILGMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLAKLLGSESSYVTTRVMGTFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNPVDYSRPQGETNLVDWLK 372          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y4374_ARATH (Probable inactive receptor kinase At4g23740 OS=Arabidopsis thaliana GN=At4g23740 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.295e-16
Identity = 66/225 (29.33%), Postives = 110/225 (48.89%), Query Frame = 2
Query:   29 KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHI-TLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            K  +  ++++   + H  +V L       + EKL+VY Y   G +AS LH       ++   LDW TR+KIAIGAA+G++ +H E N  LVH ++++S+I L+ +    +  L            +  +  +R         SS  +   DVY FG VLLEL+TGK  I      T  + + H +  + ++  +E   ++ D  L+   ++ EE+  M  +A SC
Sbjct:  374 KRDFEQQMEIIGGIKHENVVELKAYYYSKD-EKLMVYDYFSRGSVASLLH---GNRGENRIPLDWETRMKIAIGAAKGIARIHKENNGKLVHGNIKSSNIFLNSESNGCVSDLGLTAVMSPLAPPISRQAGYRAPEVTDTRKSSQLS---DVYSFGVVLLELLTGKSPI----HTTAGDEIIHLVRWVHSVVREEWTAEVFDIELLRYTNIEEEMVEMLQIAMSC 587          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.997e-16
Identity = 59/167 (35.33%), Postives = 86/167 (51.50%), Query Frame = 2
Query:   32 ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQT---SDASNSGSSAATCAYDVYCFGKVLLELV 517
            + +  EL++ S++ H  LV L+G C + + E +LVY+YM  G L   L R     D  L    W  RL+I IGAA GL YLH      ++HRD++ ++ILLD+ F  ++    LS +     S  +V T  + + T    D         T   DVY FG VLLE++
Sbjct:  558 KEFETELEMLSKLRHVHLVSLIGYC-DEDNEMVLVYEYMPHGTLKDHLFRRDKTSDPPLS---WKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVTKVSDFGLSRVGPTSASQTHVST--VVKGTFGYLDPEYYRRQVLTEKSDVYSFGVVLLEVL 718          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y4391_ARATH (Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.997e-16
Identity = 65/206 (31.55%), Postives = 100/206 (48.54%), Query Frame = 2
Query:   38 YMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKS---DDATTREWLEHTLPHITLHDKEMLTKIIDPSL 640
            +  E+ + S++ H  LV L+G C E+ +E +LVY++M  G     L+        +L  L W  RL+I IG+A GL YLH      ++HRDV++++ILLD+    ++    LS+  A G +H +   +  +    D         T   DVY FG VLLE +  +  I+     +     EW       +    K +L KIIDP L
Sbjct:  567 FQTEIQMLSKLRHRHLVSLIGYCDEN-SEMILVYEFMSNGPFRDHLY------GKNLAPLTWKQRLEICIGSARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSKDVAFGQNHVSTAVKGSFGYL-DPEYFRRQQLTDKSDVYSFGVVLLEALCARPAINPQLPREQVNLAEWA------MQWKRKGLLEKIIDPHL 758          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: MRH1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MRH1 OS=Arabidopsis thaliana GN=MRH1 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.997e-16
Identity = 65/232 (28.02%), Postives = 109/232 (46.98%), Query Frame = 2
Query:   35 SYMMELDLFSRVSHARLVPLLGQCLEHET-EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL---------SELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            +Y  ++D  SR++H   V L+G C E +   +++V++Y   G L   LH      D   + LDW  R++I +G A  L ++ H  NPP+ H D  +S I L D +  ++  +          + H  GD  Q   T  L     +A            +V+ FG ++LE+++GKL  S  +  +  +W    L      +K+ L ++IDPSL   ++  EE+  +  V R C
Sbjct:  429 AYRRKIDTLSRINHKNFVNLIGYCEEDDPFNRMMVFEYAPNGTLFEHLH------DKETEHLDWSARMRIIMGTAYCLQHM-HGMNPPMAHTDFNSSEIYLTDDYAAKVSEIPFNLEARLNPKKHVSGDLEQ---TSLLLPPEPEA------------NVHSFGVLMLEIISGKLSFS-DEYGSIEQWASKYL------EKDDLGEMIDPSLKTFKE--EELEVICDVIREC 629          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.997e-16
Identity = 65/213 (30.52%), Postives = 102/213 (47.89%), Query Frame = 2
Query:   47 ELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAA-----TCAYDVYCFGKVLLELVTGKL----GISKSDDA------TTREWLEHTLPHITLHDKEMLTKIIDPSL 640
            E+ L +++ H  LV L+G C++ E E+LLVY+++    L   +      + +  Q LDW+ R K+  G A GL YLH +    ++HRD++AS+ILLD +   ++     L    DS Q +  RF  R            A     +   DV+ FG +++E++TGK     G +  +DA        R W E T           +  +IDPSL
Sbjct:  401 EILLLAKLQHRNLVRLIGFCIQGE-ERLLVYEFIKNASLDQFI-----FDTEKRQLLDWVVRYKMIGGIARGLLYLHEDSRFRIIHRDLKASNILLDQEMNPKIADFG-LAKLFDSGQTMTHRFTSRIAGTYGYMAPEYAMHGQFSVKTDVFSFGVLVIEIITGKRNNNGGSNGDEDAEDLLSWVWRSWREDT-----------ILSVIDPSL 595          
The following BLAST results are available for this feature:
BLAST of CX287206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
CRK2_ARATH7.887e-1732.35Cysteine-rich receptor-like protein kinase 2 OS=Ar... [more]
CRK27_ARATH1.030e-1628.46Cysteine-rich receptor-like protein kinase 27 OS=A... [more]
Y5694_ARATH1.345e-1631.25Probably inactive leucine-rich repeat receptor-lik... [more]
Y2706_ARATH1.345e-1633.52Probable receptor-like protein kinase At2g47060 OS... [more]
Y1154_ARATH1.345e-1630.11Probable serine/threonine-protein kinase At1g01540... [more]
Y4374_ARATH2.295e-1629.33Probable inactive receptor kinase At4g23740 OS=Ara... [more]
Y5900_ARATH2.997e-1635.33Putative receptor-like protein kinase At5g39000 OS... [more]
Y4391_ARATH2.997e-1631.55Probable receptor-like protein kinase At4g39110 OS... [more]
MRH1_ARATH2.997e-1628.02Probable LRR receptor-like serine/threonine-protei... [more]
CRK29_ARATH2.997e-1630.52Cysteine-rich receptor-like protein kinase 29 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC01005H06SK Veg1 Citrus clementina cDNA clone C01005H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287206 ID=CX287206; Name=CX287206; organism=Citrus clementina; type=EST; length=700bp
AAAAAAGGTCAGTCTGCATTCGTTCAAGAAAGAATCATACATGATGGAAT
TAGATTTGTTCAGCAGAGTTTCACATGCAAGACTGGTGCCACTTTTAGGC
CAATGCTTGGAGCATGAGACAGAGAAACTTTTGGTCTACAAATATATGGT
ATGTGGAGATTTGGCTAGTTCCTTGCACAGGGTTACAGATTTGGAGGATG
ACAGTTTACAATCCCTAGATTGGATTACAAGATTGAAAATTGCAATTGGT
GCGGCGGAAGGTTTATCCTACCTACATCATGAGTGTAACCCTCCTCTTGT
TCACAGAGATGTTCAAGCCAGCAGTATCCTTCTCGATGATAAATTTGAAG
TTCGACTTGGAAGCTTGAGTGAGCTTCATGCTCAAGGAGATTCACACCAA
AATGTGCTAACGAGATTTTTGTGGAGACAAACCTCTGATGCAAGCAATTC
AGGCTCCTCCGCGGCAACTTGTGCCTATGATGTGTACTGCTTTGGAAAAG
TCCTACTTGAGCTTGTAACTGGCAAGCTTGGTATTAGCAAATCAGATGAT
GCTACTACACGAGAGTGGTTGGAACATACACTACCTCACATCACTTTACA
CGACAAGGAAATGTTGACCAAGATCATCGACCCATCTCTGATTCTAGATG
AGGATCTACTGGAAGAAGTATGGGCCATGGCAATTGTAGCCAGATCATGC
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