CX287206

Overview
NameCX287206
Unique NameCX287206
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig39 contig Ccv1_Contig39:1..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 3.914e-16
Identity = 67/239 (28.03%), Postives = 120/239 (50.21%), Query Frame = 2
Query:    2 KKVSLHSFKKES-YMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSD-----ASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            K++S+ S + ++ ++ E+ L +++ H  LV LLG CL+ E E++L+Y++     L    H + D   +    LDW TR +I  G A GL YLH +    +VHRD++AS++LLDD    ++     +    D+ Q   TRF  +            + S   +   DV+ FG ++LE++ GK      ++ ++   L +     +  + E+L  I+DPSL+    + +E+     +   C
Sbjct:  372 KRLSMKSGQGDNEFINEVSLVAKLQHRNLVRLLGFCLQGE-ERILIYEFFKNTSLD---HYIFD--SNRRMILDWETRYRIISGVARGLLYLHEDSRFKIVHRDMKASNVLLDDAMNPKIADFG-MAKLFDTDQTSQTRFTSKVAGTYGYMAPEYAMSGEFSVKTDVFSFGVLVLEIIKGKKNNWSPEEDSSLFLLSYVWK--SWREGEVL-NIVDPSLVETIGVSDEIMKCIHIGLLC 600          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.112e-16
Identity = 67/209 (32.06%), Postives = 100/209 (47.85%), Query Frame = 2
Query:   47 ELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQT---SDASNSGSSAATCAYDVYCFGKVLLELVTG---KLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILD 649
            EL++ S++ H  LV L+G C + + E +LVY+YM  G L   L R     D  L    W  RL+I IGAA GL YLH      ++HRD++ ++ILLD+ F  ++    LS +     S  +V T  + + T    D         T   DVY FG VLLE++     ++     + A    W++         +K  + +IID  L  D
Sbjct:  570 ELEMLSKLRHVHLVSLIGYC-DDDNEMVLVYEYMPHGTLKDHLFRRDKASDPPLS---WKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVAKVSDFGLSRVGPTSASQTHVST--VVKGTFGYLDPEYYRRQILTEKSDVYSFGVVLLEVLCCRPIRMQSVPPEQADLIRWVKSNF------NKRTVDQIIDSDLTAD 766          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: PTI1_SOLLC (Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 5.112e-16
Identity = 62/201 (30.85%), Postives = 97/201 (48.26%), Query Frame = 2
Query:    2 KKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQS-LDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD-----SHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLP 586
            KK+         ++ ++ + SR+    +V LLG C++    ++L Y+Y   G L   LH    ++       L W  R+KIA+GAA+GL YLH +  P ++HRD+++S+ILL D    ++      +   D         VL  F +     A     S+ +   DVY FG VLLEL+TG            R+ ++HTLP
Sbjct:   96 KKLDSSKQPDREFLAQVSMVSRLKDENVVELLGYCVDGGF-RVLAYEYAPNGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAAKGLEYLHEKAQPHIIHRDIKSSNILLFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLSSKS---DVYSFGVVLLELLTG------------RKPVDHTLP 280          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: IRAK4_BOVIN (Interleukin-1 receptor-associated kinase 4 OS=Bos taurus GN=IRAK4 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.112e-16
Identity = 65/195 (33.33%), Postives = 94/195 (48.21%), Query Frame = 2
Query:   29 KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLT-RFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKE 610
            K+ +  E+ + ++  H  LV LLG   + + +  LVY YM  G L   L R++ L  D    L W  R KIA GAA GLSYLH   +   +HRD+++++ILLD+ F  ++       A     Q V+T R +      A  +     T   D+Y FG VLLE++TG   +            EH  P + L  KE
Sbjct:  228 KQQFDQEIKVMAKCQHENLVELLGFSSDGD-DLCLVYVYMPNGSL---LDRLSCL--DGTPPLSWNMRCKIAQGAANGLSYLHENHH---IHRDIKSANILLDEDFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVD-----------EHREPQLLLDIKE 402          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y1571_ARATH (Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.677e-16
Identity = 59/221 (26.70%), Postives = 98/221 (44.34%), Query Frame = 2
Query:   29 KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAY--------DVYCFGKVLLELVTGK--------LGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLI 643
            K+ ++ E+   + + H  +V L G C  H     L+Y+YM  G L   L       D+  + L W  R+ +  G A  LSY+HH+   P+VHRD+ + +ILLD+ +  ++              N      W  ++ A   G  A   AY        DVY FG ++LEL+ GK        L  S  +  + R   +  +      ++E L K+++ +L+
Sbjct:  894 KQEFLNEVKALTEIRHRNVVKLFGFC-SHRRHTFLIYEYMEKGSLNKLL-----ANDEEAKRLTWTKRINVVKGVAHALSYMHHDRITPIVHRDISSGNILLDNDYTAKISDFGTAKLLKTDSSN------W--SAVAGTYGYVAPEFAYTMKVTEKCDVYSFGVLILELIIGKHPGDLVSSLSSSPGEALSLRSISDERVLEPRGQNREKLLKMVEMALL 1100          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.677e-16
Identity = 69/204 (33.82%), Postives = 94/204 (46.08%), Query Frame = 2
Query:   47 ELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDS--HQNVLTRFLWR-QTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKS---DDATTREWLEHTLPHITLHDKEMLTKIIDPSL 640
            E+ + SR+ H  LV L+G C EH  E +LVY+YM  G L S L         +L  L W  RL+  IG+A GL YLH      ++HRDV+ ++ILLD+ F  ++     L   G S  H +V T         D         T   DVY FG VL E V  +  I+ +   D     EW       ++   +  L  IID +L
Sbjct:  564 EIVMLSRLRHRHLVSLIGFCDEHN-EMILVYEYMANGTLRSHLF------GSNLPPLSWKQRLEACIGSARGLHYLHTGSERGIIHRDVKTTNILLDENFVAKMSDFG-LSKAGPSMDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEAVCARAVINPTLPKDQINLAEWA------LSWQKQRNLESIIDSNL 753          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: RPK1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RPK1 OS=Arabidopsis thaliana GN=RPK1 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.720e-16
Identity = 58/186 (31.18%), Postives = 92/186 (49.46%), Query Frame = 2
Query:    2 KKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAY----DVYCFGKVLLELVTGKLGISKS 544
            K++S+  F+  + +  E+     V H  LV L+G     ETE  L+Y Y+  G+L   +      ++ S  +++W    KIA+  A  LSYLH +C+P ++HRD++ S+ILLD+ +   L         G S  +V T       +    +   A TC      DVY +G VLLEL++ K  +  S
Sbjct:  289 KRLSVGRFQGDQQFHAEISALEMVRHPNLVMLIGYHAS-ETEMFLIYNYLSGGNLQDFI------KERSKAAIEWKVLHKIALDVARALSYLHEQCSPKVLHRDIKPSNILLDNNYNAYLSDFGLSKLLGTSQSHVTTGV---AGTFGYVAPEYAMTCRVSEKADVYSYGIVLLELISDKRALDPS 464          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y1839_ARATH (Probable serine/threonine-protein kinase At1g18390 OS=Arabidopsis thaliana GN=At1g18390 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.139e-15
Identity = 73/248 (29.44%), Postives = 116/248 (46.77%), Query Frame = 2
Query:    2 KKVSLHSFKK-ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTR----------FLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDED--LLEEVWAMAIVARSC 700
            K++  ++FK+ E +  E+++ + + H  LV L G   +   + LLVY+Y+  G LA  LH        +  SL W  RLKIA+  A  L YLH      ++HRDV++++ILLD  F V++    LS L     +H +   +           L  Q S+ S           DVY F  VL+EL++    +   D    R+ +  +   +       L  ++DPSL  D D  + + V A+A +A  C
Sbjct:  372 KRLYDNNFKRAEQFRNEVEILTGLRHPNLVALFGCSSKQSRDLLLVYEYVANGTLADHLHG----PQANPSSLPWSIRLKIAVETASALKYLHAS---KIIHRDVKSNNILLDQNFNVKVADFGLSRLFPMDKTHVSTAPQGTPGYVDPDYHLCYQLSNKS-----------DVYSFAVVLMELIS---SLPAVDITRPRQEINLSNMAVVKIQNHELRDMVDPSLGFDTDTRVRQTVIAVAELAFQC 598          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: WAK4_ARATH (Wall-associated receptor kinase 4 OS=Arabidopsis thaliana GN=WAK4 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.139e-15
Identity = 67/227 (29.52%), Postives = 116/227 (51.10%), Query Frame = 2
Query:   32 ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL---GSLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKE-MLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            E ++ E+ + S+++H  +V LLG CLE E   LLVY+++  G L   LH    + D SL    W  RL++A+  A  L+YLH   + P++HRD++ ++ILLD+    ++   G+   +    +    ++   L     +  N+G        DVY FG VL+EL++G+  +      T++    H + +     KE  L +IID   +++E+   E+   A +A  C
Sbjct:  449 EQFINEVLVLSQINHRNVVKLLGCCLETEVP-LLVYEFISSGTLFDHLHG--SMFDSSLT---WEHRLRMAVEIAGTLAYLHSSASIPIIHRDIKTANILLDENLTAKVADFGASRLIPMDKEDLATMVQGTLGYLDPEYYNTG--LLNEKSDVYSFGVVLMELLSGQKALCFERPQTSK----HIVSYFASATKENRLHEIID-GQVMNENNQREIQKAARIAVEC 662          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.139e-15
Identity = 60/162 (37.04%), Postives = 85/162 (52.47%), Query Frame = 2
Query:   47 ELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASN-SGSSAATCAYDVYCFGKVLLELVTG 523
            E++    +SH  LV LLG C E + E LLVY++M  G L S L R  D          W  R+KI IGAA GL++L H     +++RD +AS+ILLD  ++ +L    L++L    D   +V TR +      A     +       DV+ FG VLLE++TG
Sbjct:  140 EVNFLGMLSHRNLVKLLGYCRE-DKELLLVYEFMPKGSLESHLFRRND-------PFPWDLRIKIVIGAARGLAFL-HSLQREVIYRDFKASNILLDSNYDAKLSDFGLAKL-GPADEKSHVTTRIMGTYGYAAPEYMATGHLYVKSDVFAFGVVLLEIMTG 291          
The following BLAST results are available for this feature:
BLAST of CX287206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
CRK41_ARATH3.914e-1628.03Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
Y5389_ARATH5.112e-1632.06Probable receptor-like protein kinase At5g38990 OS... [more]
PTI1_SOLLC5.112e-1630.85Pto-interacting protein 1 OS=Solanum lycopersicum ... [more]
IRAK4_BOVIN5.112e-1633.33Interleukin-1 receptor-associated kinase 4 OS=Bos ... [more]
Y1571_ARATH6.677e-1626.70Probable leucine-rich repeat receptor-like protein... [more]
Y1357_ARATH6.677e-1633.82Probable receptor-like protein kinase At1g30570 OS... [more]
RPK1_ARATH8.720e-1631.18Probable LRR receptor-like serine/threonine-protei... [more]
Y1839_ARATH1.139e-1529.44Probable serine/threonine-protein kinase At1g18390... [more]
WAK4_ARATH1.139e-1529.52Wall-associated receptor kinase 4 OS=Arabidopsis t... [more]
CX32_ARATH1.139e-1537.04Probable serine/threonine-protein kinase Cx32, chl... [more]

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Properties
Property NameValue
Genbank descriptionC01005H06SK Veg1 Citrus clementina cDNA clone C01005H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287206 ID=CX287206; Name=CX287206; organism=Citrus clementina; type=EST; length=700bp
AAAAAAGGTCAGTCTGCATTCGTTCAAGAAAGAATCATACATGATGGAAT
TAGATTTGTTCAGCAGAGTTTCACATGCAAGACTGGTGCCACTTTTAGGC
CAATGCTTGGAGCATGAGACAGAGAAACTTTTGGTCTACAAATATATGGT
ATGTGGAGATTTGGCTAGTTCCTTGCACAGGGTTACAGATTTGGAGGATG
ACAGTTTACAATCCCTAGATTGGATTACAAGATTGAAAATTGCAATTGGT
GCGGCGGAAGGTTTATCCTACCTACATCATGAGTGTAACCCTCCTCTTGT
TCACAGAGATGTTCAAGCCAGCAGTATCCTTCTCGATGATAAATTTGAAG
TTCGACTTGGAAGCTTGAGTGAGCTTCATGCTCAAGGAGATTCACACCAA
AATGTGCTAACGAGATTTTTGTGGAGACAAACCTCTGATGCAAGCAATTC
AGGCTCCTCCGCGGCAACTTGTGCCTATGATGTGTACTGCTTTGGAAAAG
TCCTACTTGAGCTTGTAACTGGCAAGCTTGGTATTAGCAAATCAGATGAT
GCTACTACACGAGAGTGGTTGGAACATACACTACCTCACATCACTTTACA
CGACAAGGAAATGTTGACCAAGATCATCGACCCATCTCTGATTCTAGATG
AGGATCTACTGGAAGAAGTATGGGCCATGGCAATTGTAGCCAGATCATGC
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