CX287206

Overview
NameCX287206
Unique NameCX287206
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: WAKLP_ARATH (Wall-associated receptor kinase-like 15 OS=Arabidopsis thaliana GN=WAKL15 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.487e-15
Identity = 71/225 (31.56%), Postives = 106/225 (47.11%), Query Frame = 2
Query:   47 ELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGIS---KSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLIL--DEDLLEEVWAMAIVARSC 700
            E+ +  +VSH  LV LLG C+E E   +LVY+++  G L   ++            L    RL IA   A+GL YLH   +PP+ HRDV++S+ILLD+  +V++    LS L     SH     +       D     +   T   DVY FG VL EL+T K  I    + +D     ++   L    L D      +IDP + +   E  +E + A+ ++A  C
Sbjct:  398 EVQILCQVSHKNLVKLLGCCIELEMP-VLVYEFVPNGTLFEHIYGGGGGGGGLYDHLPLRRRLMIAHQTAQGLDYLHSSSSPPIYHRDVKSSNILLDENLDVKVADFGLSRLGVSDVSHVTTCAQGTLGYL-DPEYYLNFQLTDKSDVYSFGVVLFELLTCKKAIDFNREEEDVNLVVFVRKALKEGRLMD------VIDPVIGIGATEKEIESMKALGVLAELC 614          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y5707_ARATH (Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.943e-15
Identity = 64/208 (30.77%), Postives = 101/208 (48.56%), Query Frame = 2
Query:   32 ESYMMELDLFSRVSHARLVPLLGQCLEH-ET--EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSL 640
            + ++ E+     V+H  +V L+G C E  ET  E+LLVY+YM    L   L            +L W  RL+I +GAAEGL+YLH   +  +++RD ++S++LLDD+F  +L    L+     GD+      R      +      +       DVY FG VL E++TG+  I ++     R  L+    +    D +  + I+DP L
Sbjct:  132 KQWLAEVQFLGVVNHPNVVKLIGYCSEDGETGIERLLVYEYMSNRSLEDHLFPRRS------HTLPWKKRLEIMLGAAEGLTYLH---DLKVIYRDFKSSNVLLDDQFCPKLSDFGLAREGPDGDNTHVTTARVGTHGYAAPEYVQTGHLRLKSDVYSFGVVLYEIITGRRTIERNKPVAERRLLDWVKEYPA--DSQRFSMIVDPRL 328          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.537e-15
Identity = 62/207 (29.95%), Postives = 101/207 (48.79%), Query Frame = 2
Query:   38 YMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGD-SHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGIS---KSDDATTREWLEHTLPHITLHDKEMLTKIIDPSL 640
            +  E+++ S++ H  LV L+G C +  +E +LVY+YM  G L S L+         L  L W  RL+I IGAA GL YLH   +  ++HRDV+ ++ILLD+    ++    LS+     D +H +   +  +    D         T   DVY FG VL+E++  +  ++     +     EW       +    K +L +I+D +L
Sbjct:  551 FRTEIEMLSKLRHRHLVSLIGYC-DERSEMILVYEYMANGPLRSHLYGA------DLPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDENLVAKVADFGLSKTGPSLDQTHVSTAVKGSFGYL-DPEYFRRQQLTEKSDVYSFGVVLMEVLCCRPALNPVLPREQVNIAEWA------MAWQKKGLLDQIMDSNL 743          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: PUB52_ARATH (U-box domain-containing protein 52 OS=Arabidopsis thaliana GN=PUB52 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.537e-15
Identity = 60/179 (33.52%), Postives = 88/179 (49.16%), Query Frame = 2
Query:   32 ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTS--------DASNSGSSAATCAYDVYCFGKVLLELVTGKLGIS 538
            + +  EL++ S++ H  LV LLG C E      LVY+YM  G L   L  V D        + W  R +IA+  A  L +LH     P++HRD++  +ILLD  F  +LG   LS +  Q D    V +R +++QTS        D     +   +   DVY  G V+L+L+T K  I+
Sbjct:  528 KQFDQELEILSKIRHPHLVLLLGACPERGC---LVYEYMDNGSLDDRLMLVNDTPP-----IPWFERFRIALEVASALVFLHKSKPRPIIHRDLKPGNILLDHNFVSKLGDVGLSTMVNQDD----VSSRTIFKQTSPVGTLCYIDPEYQRTGIISPKSDVYSLGVVILQLITAKPAIA 694          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y1061_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At1g50610 OS=Arabidopsis thaliana GN=At1g50610 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.314e-15
Identity = 58/174 (33.33%), Postives = 92/174 (52.87%), Query Frame = 2
Query:   14 LHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLV--HRDVQASSILLDDKFEVRLGSLSELHAQGDSH-QNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGK 526
            +++  ++ +   +    R++H  ++PL+      E EKLLV ++M    LAS LH       ++   LDWITRLKI  G A+GLSYL  E  P L   H  +++S+I+LDD FE  L   +        H  N +T +   ++ +   S     T   DV+CFG ++LE++TG+
Sbjct:  408 MNNVGRDEFHEHMRRLGRLNHPNILPLVAYYYRRE-EKLLVTEFMPNSSLASHLHA------NNSAGLDWITRLKIIKGVAKGLSYLFDEL-PTLTIPHGHMKSSNIVLDDSFEPLLTDYALRPMMSSEHAHNFMTAY---KSPEYRPSKGQIITKKTDVWCFGVLILEVLTGR 570          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: WAK5_ARATH (Wall-associated receptor kinase 5 OS=Arabidopsis thaliana GN=WAK5 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.314e-15
Identity = 66/225 (29.33%), Postives = 110/225 (48.89%), Query Frame = 2
Query:   32 ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTS--DASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            E ++ E+ + S+++H  +V LLG CLE E   LLVY+++  G L   LH    + D SL    W  RL+IAI  A  L+YLH   + P++HRDV+ ++ILLD+    ++             Q  LT  +       D     +       DVY FG VL+EL++G+  +      +++  + +    ++   +  L +IID   +++E    E+   A +A  C
Sbjct:  447 EQFINEVLVLSQINHRNVVKLLGCCLETEVP-LLVYEFISSGTLFDHLHG--SMFDSSLT---WEHRLRIAIEVAGTLAYLHSYASIPIIHRDVKTANILLDENLTAKVADFGASRLI-PMDQEQLTTMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGEKALCFERPQSSKHLVSY---FVSAMKENRLHEIID-GQVMNEYNQREIQESARIAVEC 660          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.328e-15
Identity = 54/170 (31.76%), Postives = 86/170 (50.59%), Query Frame = 2
Query:   32 ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTR-----FLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGK 526
            E +  E+D+ +++ H  L  LLG CL+ E EK+LVY+++    L   L      +++  + LDW  R KI  G A G+ YLH +    ++HRD++AS+ILLD     ++         G       T+     + +     A +   S  +   DVY FG ++LEL+TGK
Sbjct:  386 EEFKNEVDVVAKLQHRNLAKLLGYCLDGE-EKILVYEFVPNKSLDYFL-----FDNEKRRVLDWQRRYKIIEGIARGILYLHRDSRLTIIHRDLKASNILLDADMHPKISDFGMARIFGVDQTQANTKRIVGTYGYMSPEYAIHGKYSVKS---DVYSFGVLVLELITGK 546          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: ANX2_ARATH (Receptor-like protein kinase ANXUR2 OS=Arabidopsis thaliana GN=ANX2 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.328e-15
Identity = 62/203 (30.54%), Postives = 93/203 (45.81%), Query Frame = 2
Query:   47 ELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTS--DASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKS---DDATTREWLEHTLPHITLHDKEMLTKIIDPSL 640
            E++L SR+ H  LV L+G C +   E  L+Y YM  G L   L+            L W  RL+IAIGAA GL YLH      ++HRDV+ ++ILLD+ +  ++          + +   +T  +       D         T   DVY FG VL E++  +  ++ S   +  +  +W  +     TL D      IIDP+L
Sbjct:  565 EIELLSRLRHKHLVSLIGYC-DEGGEMCLIYDYMSLGTLREHLYNT------KRPQLTWKRRLEIAIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENWVAKVSDFGLSKTGPNMNGGHVTTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPALNPSLSKEQVSLGDWAMNCKRKGTLED------IIDPNL 754          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: PUB35_ARATH (U-box domain-containing protein 35 OS=Arabidopsis thaliana GN=PUB35 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.652e-15
Identity = 56/178 (31.46%), Postives = 88/178 (49.44%), Query Frame = 2
Query:   32 ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLS-ELHAQGDSHQNVLTRFLWRQTS--------DASNSGSSAATCAYDVYCFGKVLLELVTGKLGIS 538
            + +  EL++ S++ H  LV LLG C E   +  LVY+YM  G L   L +V     ++   L W  R +IA   A  L +LH     P++HRD++ ++ILLD  F  ++G +      Q D      T  +++QTS        D     +   +   D+Y FG +LL+L+T K  I+
Sbjct:  518 KQFQQELEILSKIRHPHLVLLLGACPE---QGALVYEYMENGSLEDRLFQV-----NNSPPLPWFERFRIAWEVAAALVFLHKSKPKPIIHRDLKPANILLDHNFVSKVGDVGLSTMVQVDPLSTKFT--IYKQTSPVGTLCYIDPEYQRTGRISSKSDIYSFGMILLQLLTAKPAIA 685          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: IRAK4_HUMAN (Interleukin-1 receptor-associated kinase 4 OS=Homo sapiens GN=IRAK4 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.652e-15
Identity = 62/195 (31.79%), Postives = 94/195 (48.21%), Query Frame = 2
Query:   29 KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLT-RFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKE 610
            K+ +  E+ + ++  H  LV LLG   + + +  LVY YM  G L   L R++ L  D    L W  R KIA GAA G+++LH   +   +HRD+++++ILLD+ F  ++       A     Q V+T R +      A  +     T   D+Y FG VLLE++TG   +            EH  P + L  KE
Sbjct:  227 KQQFDQEIKVMAKCQHENLVELLGFSSDGD-DLCLVYVYMPNGSL---LDRLSCL--DGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVD-----------EHREPQLLLDIKE 401          
The following BLAST results are available for this feature:
BLAST of CX287206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
WAKLP_ARATH1.487e-1531.56Wall-associated receptor kinase-like 15 OS=Arabido... [more]
Y5707_ARATH1.943e-1530.77Probable receptor-like protein kinase At5g47070 OS... [more]
THE1_ARATH2.537e-1529.95Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
PUB52_ARATH2.537e-1533.52U-box domain-containing protein 52 OS=Arabidopsis ... [more]
Y1061_ARATH3.314e-1533.33Probably inactive leucine-rich repeat receptor-lik... [more]
WAK5_ARATH3.314e-1529.33Wall-associated receptor kinase 5 OS=Arabidopsis t... [more]
CRK25_ARATH4.328e-1531.76Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
ANX2_ARATH4.328e-1530.54Receptor-like protein kinase ANXUR2 OS=Arabidopsis... [more]
PUB35_ARATH5.652e-1531.46U-box domain-containing protein 35 OS=Arabidopsis ... [more]
IRAK4_HUMAN5.652e-1531.79Interleukin-1 receptor-associated kinase 4 OS=Homo... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC01005H06SK Veg1 Citrus clementina cDNA clone C01005H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287206 ID=CX287206; Name=CX287206; organism=Citrus clementina; type=EST; length=700bp
AAAAAAGGTCAGTCTGCATTCGTTCAAGAAAGAATCATACATGATGGAAT
TAGATTTGTTCAGCAGAGTTTCACATGCAAGACTGGTGCCACTTTTAGGC
CAATGCTTGGAGCATGAGACAGAGAAACTTTTGGTCTACAAATATATGGT
ATGTGGAGATTTGGCTAGTTCCTTGCACAGGGTTACAGATTTGGAGGATG
ACAGTTTACAATCCCTAGATTGGATTACAAGATTGAAAATTGCAATTGGT
GCGGCGGAAGGTTTATCCTACCTACATCATGAGTGTAACCCTCCTCTTGT
TCACAGAGATGTTCAAGCCAGCAGTATCCTTCTCGATGATAAATTTGAAG
TTCGACTTGGAAGCTTGAGTGAGCTTCATGCTCAAGGAGATTCACACCAA
AATGTGCTAACGAGATTTTTGTGGAGACAAACCTCTGATGCAAGCAATTC
AGGCTCCTCCGCGGCAACTTGTGCCTATGATGTGTACTGCTTTGGAAAAG
TCCTACTTGAGCTTGTAACTGGCAAGCTTGGTATTAGCAAATCAGATGAT
GCTACTACACGAGAGTGGTTGGAACATACACTACCTCACATCACTTTACA
CGACAAGGAAATGTTGACCAAGATCATCGACCCATCTCTGATTCTAGATG
AGGATCTACTGGAAGAAGTATGGGCCATGGCAATTGTAGCCAGATCATGC
back to top