CX287206

Overview
NameCX287206
Unique NameCX287206
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig39 contig Ccv1_Contig39:1..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y1848_ARATH (Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana GN=RKL1 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.785e-14
Identity = 63/221 (28.51%), Postives = 102/221 (46.15%), Query Frame = 2
Query:   32 ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKL---------GI-------SKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSL 640
            + +  +++L   + H  LVPL       + EKLLVY +M  G L++ LH            L+W  R +IAIGAA GL YLH +      H ++++S+ILL    + ++    L++L     ++ N  T +   + +D             DVY FG VLLEL+TGK          G+       S + D   RE  +  L  +   ++EM+ +++   L
Sbjct:  409 KEFKEKIELVGAMDHENLVPLRAYYFSRD-EKLLVYDFMPMGSLSALLH---GNRGAGRSPLNWDVRSRIAIGAARGLDYLHSQ-GTSTSHGNIKSSNILLTKSHDAKVSDFGLAQLVGSSATNPNRATGYRAPEVTDPKRVSQKG-----DVYSFGVVLLELITGKAPSNSVMNEEGVDLPRWVKSVARDEWRREVFDSELLSLATDEEEMMAEMVQLGL 619          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 4.785e-14
Identity = 51/167 (30.54%), Postives = 82/167 (49.10%), Query Frame = 2
Query:   29 KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSDASNSGS--SAATCAYDVYCFGKVLLELVTG 523
            ++ +  E+ + +++ H  LV LLG CLE E EK+LVY+++    L   L      +      LDW  R KI  G A G+ YLH +    ++HRD++A +ILLDD    ++         G      +TR +       S   +     +   DVY FG ++LE+++G
Sbjct:  364 EKEFENEVVVVAKLQHRNLVKLLGYCLEGE-EKILVYEFVPNKSLDHFL-----FDSTMKMKLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDDDMNPKIADFGMARIFGMDQTEAMTRRVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISG 524          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: RPK2_ARATH (LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana GN=RPK2 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.249e-14
Identity = 59/186 (31.72%), Postives = 87/186 (46.77%), Query Frame = 2
Query:    2 KKVSLHSFKK-ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAY----DVYCFGKVLLELVTGKLGISKS 544
            K++S+  F+  + +  E+    R+ H  LV L+G     ETE  LVY Y+  G+L   +   +        + DW    KIA+  A  L+YLH +C P ++HRDV+ S+ILLDD     L         G S  +  T       +    +   A TC      DVY +G VLLEL++ K  +  S
Sbjct:  902 KRLSIGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHAS-ETEMFLVYNYLPGGNLEKFIQERS--------TRDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDCNAYLSDFGLARLLGTSETHATTGV---AGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPS 1075          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CRK8_ARATH (Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 6.249e-14
Identity = 58/199 (29.15%), Postives = 99/199 (49.75%), Query Frame = 2
Query:    2 KKVSLHSFKKES-YMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG-----DSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHT 580
            K++S +S + E+ +  E+ + +++ H  LV LLG  L+ E E++LVY+YM    L   L   T         LDW+ R  I  G A G+ YLH +    ++HRD++AS+ILLD     ++         G     D+   ++  + +     A +   S  +   DVY FG ++LE+++G+   S  +    ++ L HT
Sbjct:  381 KRLSKNSRQGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGE-ERILVYEYMPNKSLDCLLFDPT-----KQTQLDWMQRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADINPKIADFGMARIFGLDQTQDNTSRIVGTYGYMAPEYAMHGQFSMKS---DVYSFGVLVLEIISGRKNSSFDESDGAQDLLTHT 570          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 6.249e-14
Identity = 58/188 (30.85%), Postives = 90/188 (47.87%), Query Frame = 2
Query:   47 ELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAY---------------DVYCFGKVLLELVTGK--LGISKSDDATT 559
            E  L +++ H  LV LLG CLE E E++L+Y+++    L   L      + +    LDW  R KI  G A G+ YLH +    ++HRD++AS+ILLD     ++               + T F   QT    N+   A T AY               D+Y FG ++LE+++GK   G+ + D+ +T
Sbjct:  394 EAVLVTKLQHRNLVRLLGFCLERE-EQILIYEFVHNKSLDYFL-----FDPEKQSQLDWTRRYKIIGGIARGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADF-----------GLATIFGVEQTQ--GNTNRIAGTYAYMSPEYAMHGQYSMKSDIYSFGVLVLEIISGKKNSGVYQMDETST 562          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y5659_ARATH (Probable inactive receptor kinase At5g16590 OS=Arabidopsis thaliana GN=At5g16590 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.162e-14
Identity = 54/168 (32.14%), Postives = 89/168 (52.98%), Query Frame = 2
Query:   29 KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGS--LSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGK 526
            ++ +  +L +   +SHA LV L+      + EKL+V++YM  G L++ LH     +      L+W TR  IA+GAA  +SYLH   +    H ++++S+ILL + FE ++    L+ +     S  N +  +   + +DA      A     DVY FG ++LEL+TGK
Sbjct:  380 EKEFREKLQVLGSISHANLVTLIAYYFSRD-EKLVVFEYMSRGSLSALLH---GNKGSGRSPLNWETRANIALGAARAISYLHSR-DATTSHGNIKSSNILLSESFEAKVSDYCLAPM-ISPTSTPNRIDGYRAPEVTDARKISQKA-----DVYSFGVLILELLTGK 536          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y3804_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 OS=Arabidopsis thaliana GN=At3g28040 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.162e-14
Identity = 54/190 (28.42%), Postives = 86/190 (45.26%), Query Frame = 2
Query:   32 ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAY----------------DVYCFGKVLLELVTGKLGISKSDDA 553
            E +  E+ + ++  H  LV + G     +   LLV +Y+  G+L S LH      + S   L W  R KI +G A+GL+YLHH   P  +H +++ ++ILLD+K   ++                L+R L  Q  +  N+        Y                DVY FG ++LELVTG+  +   +D+
Sbjct:  767 EDFDREVRILAKAKHPNLVSIKGYFWTPDLH-LLVSEYIPNGNLQSKLHE----REPSTPPLSWDVRYKIILGTAKGLAYLHHTFRPTTIHFNLKPTNILLDEKNNPKISDFG------------LSRLLTTQDGNTMNNNRFQNALGYVAPELECQNLRVNEKCDVYGFGVLILELVTGRRPVEYGEDS 939          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: RLK90_ARATH (Probable inactive receptor kinase RLK902 OS=Arabidopsis thaliana GN=RLK902 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.162e-14
Identity = 56/162 (34.57%), Postives = 85/162 (52.47%), Query Frame = 2
Query:   47 ELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGK 526
            ++++   + H  LVPL       + EKLLVY +M  G L++ LH     +      L+W  R  IA+GAA GL YLH + +P   H +V++S+ILL +  + R+    L++L +   +  N  T +   + +D       A     DVY FG VLLEL+TGK
Sbjct:  408 KIEVVGAMDHENLVPLRAYYYSGD-EKLLVYDFMPMGSLSALLH---GNKGAGRPPLNWEVRSGIALGAARGLDYLHSQ-DPLSSHGNVKSSNILLTNSHDARVSDFGLAQLVSASSTTPNRATGYRAPEVTDPRRVSQKA-----DVYSFGVVLLELLTGK 559          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.162e-14
Identity = 53/171 (30.99%), Postives = 88/171 (51.46%), Query Frame = 2
Query:   29 KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQS-LDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA----QGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGK 526
            ++ +  E+ + +++ H  LV LLG CLE E EK+LVY+++    L   L       D  +QS LDW TR KI  G A G+ YLH +    ++HRD++A +ILLD     ++            Q ++H   +       + + +  G  +     DVY FG ++LE+++G+
Sbjct:  378 EKEFKNEVVVVAKLQHRNLVKLLGFCLERE-EKILVYEFVSNKSLDYFLF------DSRMQSQLDWTTRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFEIDQTEAHTRRVVGTYGYMSPEYAMYGQFSMKS--DVYSFGVLVLEIISGR 539          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.066e-13
Identity = 58/171 (33.92%), Postives = 82/171 (47.95%), Query Frame = 2
Query:   32 ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQS-LDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTR-----FLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGK 526
            E +  E  L S++ H  LV LLG CLE E EK+LVY+++    L   L       D + Q  LDW  R  I  G A G+ YLH +    ++HRD++AS+ILLD     ++         G       TR     F +     A     S  +   DVY FG ++LE+++GK
Sbjct:  384 EEFKNEAVLVSKLQHKNLVRLLGFCLEGE-EKILVYEFVPNKSLDYFLF------DPAKQGELDWTRRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGVDQSQANTRRIAGTFGYMSPEYAMRGHFSMKS---DVYSFGVLVLEIISGK 544          
The following BLAST results are available for this feature:
BLAST of CX287206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
Y1848_ARATH4.785e-1428.51Probable inactive receptor kinase At1g48480 OS=Ara... [more]
CRK19_ARATH4.785e-1430.54Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
RPK2_ARATH6.249e-1431.72LRR receptor-like serine/threonine-protein kinase ... [more]
CRK8_ARATH6.249e-1429.15Cysteine-rich receptor-like protein kinase 8 OS=Ar... [more]
CRK11_ARATH6.249e-1430.85Cysteine-rich receptor-like protein kinase 11 OS=A... [more]
Y5659_ARATH8.162e-1432.14Probable inactive receptor kinase At5g16590 OS=Ara... [more]
Y3804_ARATH8.162e-1428.42Probably inactive leucine-rich repeat receptor-lik... [more]
RLK90_ARATH8.162e-1434.57Probable inactive receptor kinase RLK902 OS=Arabid... [more]
CRK5_ARATH8.162e-1430.99Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]
CRK35_ARATH1.066e-1333.92Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionC01005H06SK Veg1 Citrus clementina cDNA clone C01005H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287206 ID=CX287206; Name=CX287206; organism=Citrus clementina; type=EST; length=700bp
AAAAAAGGTCAGTCTGCATTCGTTCAAGAAAGAATCATACATGATGGAAT
TAGATTTGTTCAGCAGAGTTTCACATGCAAGACTGGTGCCACTTTTAGGC
CAATGCTTGGAGCATGAGACAGAGAAACTTTTGGTCTACAAATATATGGT
ATGTGGAGATTTGGCTAGTTCCTTGCACAGGGTTACAGATTTGGAGGATG
ACAGTTTACAATCCCTAGATTGGATTACAAGATTGAAAATTGCAATTGGT
GCGGCGGAAGGTTTATCCTACCTACATCATGAGTGTAACCCTCCTCTTGT
TCACAGAGATGTTCAAGCCAGCAGTATCCTTCTCGATGATAAATTTGAAG
TTCGACTTGGAAGCTTGAGTGAGCTTCATGCTCAAGGAGATTCACACCAA
AATGTGCTAACGAGATTTTTGTGGAGACAAACCTCTGATGCAAGCAATTC
AGGCTCCTCCGCGGCAACTTGTGCCTATGATGTGTACTGCTTTGGAAAAG
TCCTACTTGAGCTTGTAACTGGCAAGCTTGGTATTAGCAAATCAGATGAT
GCTACTACACGAGAGTGGTTGGAACATACACTACCTCACATCACTTTACA
CGACAAGGAAATGTTGACCAAGATCATCGACCCATCTCTGATTCTAGATG
AGGATCTACTGGAAGAAGTATGGGCCATGGCAATTGTAGCCAGATCATGC
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