CX287206

Overview
NameCX287206
Unique NameCX287206
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y3288_ARATH (Probable inactive receptor kinase At3g02880 OS=Arabidopsis thaliana GN=At3g02880 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.392e-13
Identity = 55/168 (32.74%), Postives = 89/168 (52.98%), Query Frame = 2
Query:   29 KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGK 526
            ++ +   L +   +SHA LV L+      + EKLLV++YM  G L++ LH     + +    L+W TR  IA+GAA  +SYLH   +    H ++++S+ILL D +E ++    L+ +     S  N +  +   + +DA      A     DVY FG ++LEL+TGK
Sbjct:  382 EKEFRERLHVLGSMSHANLVTLIAYYFSRD-EKLLVFEYMSKGSLSAILH---GNKGNGRTPLNWETRAGIALGAARAISYLHSR-DGTTSHGNIKSSNILLSDSYEAKVSDYGLAPI-ISSTSAPNRIDGYRAPEITDARKISQKA-----DVYSFGVLILELLTGK 538          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y4361_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g36180 OS=Arabidopsis thaliana GN=At4g36180 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.818e-13
Identity = 61/212 (28.77%), Postives = 100/212 (47.17%), Query Frame = 2
Query:   23 FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGS--LSELHAQGDSHQNVLTRF---LWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLI 643
            FKKE+     ++  +V H  +  L G        +LLVY YM  G+L++ L   +  +      L+W  R  IA+G A GL +LH      +VH D++  ++L D  FE  +    L  L  +  S   V       L   + +A+ SG    T   D+Y FG VLLE++TGK  +  + D    +W++  L       +  +T++++P L+
Sbjct:  882 FKKEA-----EVLGKVKHRNITVLRGYYAGPPDLRLLVYDYMPNGNLSTLLQEASHQDG---HVLNWPMRHLIALGIARGLGFLHQS---NMVHGDIKPQNVLFDADFEAHISDFGLDRLTIRSPSRSAVTANTIGTLGYVSPEATLSGE--ITRESDIYSFGIVLLEILTGKRPVMFTQDEDIVKWVKKQL------QRGQVTELLEPGLL 1074          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y2267_ARATH (Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.818e-13
Identity = 62/226 (27.43%), Postives = 114/226 (50.44%), Query Frame = 2
Query:   29 KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            K+ +  ++++  ++ H  ++PL       + EKLLV+ +M  G L++ LH            LDW  R++IAI AA GL++LH   +  LVH +++AS+ILL    +  +    L++L +   S  N L  +   +  +     +   T   DVY FG +LLEL+TGK   S +  +   E ++     +++  +E   ++ D  L+   ++ EE+  +  +A +C
Sbjct:  388 KKEFETQMEVVGKIKHPNVIPLRAYYYSKD-EKLLVFDFMPTGSLSALLH---GSRGSGRTPLDWDNRMRIAITAARGLAHLH--VSAKLVHGNIKASNILLHPNQDTCVSDYGLNQLFS-NSSPPNRLAGYHAPEVLE-----TRKVTFKSDVYSFGVLLLELLTGK---SPNQASLGEEGIDLPRWVLSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMAC 598          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CRK42_ARATH (Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.818e-13
Identity = 62/214 (28.97%), Postives = 94/214 (43.93%), Query Frame = 2
Query:   32 ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSA--------ATCAYDVYCFGKVLLELVTG---KLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSL 640
            E +  E++L S + H  LV LLG C     E LLVY+Y+    L   L      ++   + L+W  RL I +G AEGL+YLH      ++HRD++ S++LLDD+   ++         G    ++        T  A   G  A         T   DVY FG ++LE+  G      + ++     R W  +TL          L + +DP L
Sbjct:  354 EEFFNEVNLISGIQHKNLVKLLG-CSIEGPESLLVYEYVPNKSLDQFL-----FDESQSKVLNWSQRLNIILGTAEGLAYLHGGSPVRIIHRDIKTSNVLLDDQLNPKIADFGLARCFGLDKTHL-------STGIAGTLGYMAPEYVVRGQLTEKADVYSFGVLVLEIACGTRINAFVPETGHLLQRVWNLYTL--------NRLVEALDPCL 546          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.818e-13
Identity = 61/207 (29.47%), Postives = 95/207 (45.89%), Query Frame = 2
Query:   47 ELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFL----WRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATT----REWLEHTLPHITLHDKEMLTKIIDPSLI 643
            E+ L +R+ H  LV LLG C E + E++LVY+++    L   +      ++D    L W  R +I  G A GL YLH +    ++HRD++AS+ILLD +   ++                 T+ +         +  N G  +A    DVY FG +LLE+++G+   S   +       + W+E   P I          IIDP LI
Sbjct:  392 EVSLLTRLQHKNLVKLLGFCNEGD-EEILVYEFVPNSSLDHFI-----FDEDKRSLLTWEVRFRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKS--DVYSFGVMLLEMISGERNNSFEGEGLAAFAWKRWVEGK-PEI----------IIDPFLI 579          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CRK39_ARATH (Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.818e-13
Identity = 65/207 (31.40%), Postives = 97/207 (46.86%), Query Frame = 2
Query:   47 ELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFL----WRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATT----REWLEHTLPHITLHDKEMLTKIIDPSLI 643
            E+ L +R+ H  LV LLG C E + E++LVY+++    L    H + D E  SL  L W  R +I  G A GL YLH +    ++HRD++AS+ILLD +   ++                 T+ +         +  N G  +A    DVY FG +LLE+++G+   S   +       + W+E   P I          IIDP LI
Sbjct:  397 EVSLLTRLQHRNLVKLLGFCNEGD-EQILVYEFVPNSSLD---HFIFDDEKRSL--LTWEMRYRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKS--DVYSFGVMLLEMISGERNNSFEGEGLAAFAWKRWVEGK-PEI----------IIDPFLI 584          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: PUB51_ARATH (U-box domain-containing protein 51 OS=Arabidopsis thaliana GN=PUB51 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.375e-13
Identity = 61/200 (30.50%), Postives = 98/200 (49.00%), Query Frame = 2
Query:   14 LHSFKK---ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSL-HRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTS--------DASNSGSSAATCAYDVYCFGKVLLELVTGK--LGISKSDDATTRE 565
            LHS K    + +  EL++ S++ H  L+ LLG C E  +   LVY+YM  G L   L  R  +++      L W  R +IA   A  L +LH     P+VHRD++ ++ILLD     ++G   LS++     SH +     ++ +T         D     +   T   D+Y FG +LL+LVT +  +G++ S +   R+
Sbjct:  458 LHSDKSSLTKQFHQELEILSKIRHPHLLLLLGACPERGS---LVYEYMHNGSLEERLMKRRPNVDTPQPPPLRWFERFRIAWEIASALYFLHTNEPRPIVHRDLKPANILLDRNNVSKIGDVGLSKMVNLDPSHAST----VFNETGPVGTFFYIDPEYQRTGVVTPESDIYAFGIILLQLVTARSAMGLAHSIEKALRD 650          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: PUB33_ARATH (U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.102e-13
Identity = 61/193 (31.61%), Postives = 97/193 (50.26%), Query Frame = 2
Query:   38 YMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL---GSLSELHAQGD-SHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHD 604
            Y  E+D+ S++ H  ++ L+G C E  +   LVY+Y+  G L   L        D+   L W  R++IA      L +LH      LVH D++ ++ILLD     +L   G+ S LH  G  S +  +T  +     +AS+SG    T   DVY FG +LL L+TG+  +  S++      +++ L + TL+D
Sbjct:  521 YQQEVDVLSKMRHPNIITLIGACPEGWS---LVYEYLPGGSLEDRLTC-----KDNSPPLSWQNRVRIATEICAALVFLHSNKAHSLVHGDLKPANILLDSNLVSKLSDFGTCSLLHPNGSKSVRTDVTGTVAYLDPEASSSGE--LTPKSDVYSFGIILLRLLTGRPALRISNE------VKYALDNGTLND 697          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CRK38_ARATH (Cysteine-rich receptor-like protein kinase 38 OS=Arabidopsis thaliana GN=CRK38 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.102e-13
Identity = 57/165 (34.55%), Postives = 81/165 (49.09%), Query Frame = 2
Query:   47 ELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTR-----FLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGK 526
            E+ L +R+ H  LV LLG C E + E++LVY+++    L    H + D E   L  L W  R +I  G A GL YLH +    ++HRD++AS+ILLD     ++                +TR     F +       N   S  T   DVY FG VLLE++TG+
Sbjct:  383 EVLLLTRLQHRNLVKLLGFCNEGD-EEILVYEFVPNSSLD---HFIFDEEKRLL--LTWDMRARIIEGVARGLVYLHEDSQLRIIHRDLKASNILLDAYMNPKVADFGMARLFNMDQTRAVTRKVVGTFGYMAPEYVRNRTFSVKT---DVYSFGVVLLEMITGR 538          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CRK6_ARATH (Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana GN=CRK6 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.051e-13
Identity = 58/198 (29.29%), Postives = 100/198 (50.51%), Query Frame = 2
Query:    2 KKVSLHSFKKES-YMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG-----DSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEH 577
            K++S +S + E+ +  E+ + +++ H  LV LLG  L+ E E++LVY+YM    L   L   T      +Q LDW+ R  I  G A G+ YLH +    ++HRD++AS+ILLD     ++         G     D+   ++  + +     A +   S  +   DVY FG ++LE+++G+   S  +    ++ L H
Sbjct:  379 KRLSKNSRQGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGE-ERILVYEYMPNKSLDCLLFDPTK----QIQ-LDWMQRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADINPKIADFGMARIFGLDQTQDNTSRIVGTYGYMAPEYAMHGQFSMKS---DVYSFGVLVLEIISGRKNSSFGESDGAQDLLTH 567          
The following BLAST results are available for this feature:
BLAST of CX287206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
Y3288_ARATH1.392e-1332.74Probable inactive receptor kinase At3g02880 OS=Ara... [more]
Y4361_ARATH1.818e-1328.77Probable LRR receptor-like serine/threonine-protei... [more]
Y2267_ARATH1.818e-1327.43Probable inactive receptor kinase At2g26730 OS=Ara... [more]
CRK42_ARATH1.818e-1328.97Cysteine-rich receptor-like protein kinase 42 OS=A... [more]
CRK40_ARATH1.818e-1329.47Cysteine-rich receptor-like protein kinase 40 OS=A... [more]
CRK39_ARATH1.818e-1331.40Putative cysteine-rich receptor-like protein kinas... [more]
PUB51_ARATH2.375e-1330.50U-box domain-containing protein 51 OS=Arabidopsis ... [more]
PUB33_ARATH3.102e-1331.61U-box domain-containing protein 33 OS=Arabidopsis ... [more]
CRK38_ARATH3.102e-1334.55Cysteine-rich receptor-like protein kinase 38 OS=A... [more]
CRK6_ARATH4.051e-1329.29Cysteine-rich receptor-like protein kinase 6 OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionC01005H06SK Veg1 Citrus clementina cDNA clone C01005H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287206 ID=CX287206; Name=CX287206; organism=Citrus clementina; type=EST; length=700bp
AAAAAAGGTCAGTCTGCATTCGTTCAAGAAAGAATCATACATGATGGAAT
TAGATTTGTTCAGCAGAGTTTCACATGCAAGACTGGTGCCACTTTTAGGC
CAATGCTTGGAGCATGAGACAGAGAAACTTTTGGTCTACAAATATATGGT
ATGTGGAGATTTGGCTAGTTCCTTGCACAGGGTTACAGATTTGGAGGATG
ACAGTTTACAATCCCTAGATTGGATTACAAGATTGAAAATTGCAATTGGT
GCGGCGGAAGGTTTATCCTACCTACATCATGAGTGTAACCCTCCTCTTGT
TCACAGAGATGTTCAAGCCAGCAGTATCCTTCTCGATGATAAATTTGAAG
TTCGACTTGGAAGCTTGAGTGAGCTTCATGCTCAAGGAGATTCACACCAA
AATGTGCTAACGAGATTTTTGTGGAGACAAACCTCTGATGCAAGCAATTC
AGGCTCCTCCGCGGCAACTTGTGCCTATGATGTGTACTGCTTTGGAAAAG
TCCTACTTGAGCTTGTAACTGGCAAGCTTGGTATTAGCAAATCAGATGAT
GCTACTACACGAGAGTGGTTGGAACATACACTACCTCACATCACTTTACA
CGACAAGGAAATGTTGACCAAGATCATCGACCCATCTCTGATTCTAGATG
AGGATCTACTGGAAGAAGTATGGGCCATGGCAATTGTAGCCAGATCATGC
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