CX287206

Overview
NameCX287206
Unique NameCX287206
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig39 contig Ccv1_Contig39:1..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.700e-24
Identity = 73/204 (35.78%), Postives = 113/204 (55.39%), Query Frame = 2
Query:   38 YMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASN-SGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSL 640
            +++E+ + S + H  LV L+G C + + ++LLVY++M  G L   LH   DL  D  ++LDW  R+KIA GAA+GL +LH + NPP+++RD ++S+ILLD+ F  +L    L++L   GD   +V TR +      A   + +   T   DVY FG V LEL+TG+  I        +  +    P    +D+    K+ DP L
Sbjct:  128 FLVEVLMLSLLHHPNLVNLIGYCADGD-QRLLVYEFMPLGSLEDHLH---DLPPDK-EALDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPTGDK-SHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSEMPHGEQNLVAWARP--LFNDRRKFIKLADPRL 323          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.136e-23
Identity = 81/227 (35.68%), Postives = 119/227 (52.42%), Query Frame = 2
Query:   26 KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL--SELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            K E ++ E+ L S+++H  +V LLG CLE E   +LVY+Y+  GDL   LH   D  DD   ++ W  RL+IAI  A  L+Y+H   + P+ HRD++ ++ILLD+K+  ++     S       +H   L    +    D     SS  T   DVY FG VL+EL+TG+  +S+      R    H L  +    +  +  IID   I DE  LE+V A+A +AR C
Sbjct:  466 KMEEFINEIVLLSQINHRNIVKLLGCCLETEVP-ILVYEYIPNGDLFKRLH---DESDD--YTMTWEVRLRIAIEIAGALTYMHSAASFPIFHRDIKTTNILLDEKYRAKVSDFGTSRSVTLDQTHLTTLVAGTFGY-MDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPLSRVRSEEGRGLATHFLEAM---KENRVIDIID-IRIKDESKLEQVMAVAKLARKC 681          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.938e-23
Identity = 77/226 (34.07%), Postives = 123/226 (54.42%), Query Frame = 2
Query:   38 YMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTR-FLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTR----EWLEHTLPHITLHDKEMLTKIIDPSL--ILDEDLLEEVWAMAIV 688
            +  E+++     H  L+ L G C+  E E++LVY YM  G +A    R+ D   +   SLDW  R+ IA+GAA GL YLH +CNP ++HRDV+A++ILLD+ FE  +G   L++L  Q DSH     R  +     +  ++G S+     DV+ FG ++LEL+TG   I + +    +     W+       TL  ++   +++D  L    D+ +LEEV  +A++
Sbjct:  341 FQTEVEMIGLAVHRNLLRLFGFCMTPE-ERMLVYPYMPNGSVAD---RLRDNYGEK-PSLDWNRRISIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESFEAIVGDFGLAKLLDQRDSHVTTAVRGTIGHIAPEYLSTGQSSEKT--DVFGFGVLILELITGHKMIDQGNGQVRKGMILSWVR------TLKAEKRFAEMVDRDLKGEFDDLVLEEVVELALL 553          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 2.531e-23
Identity = 66/186 (35.48%), Postives = 103/186 (55.38%), Query Frame = 2
Query:   32 ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASNSG-SSAATCAYDVYCFGKVLLELVTGKLGISK--SDDATTREWLE 574
            +S+  E+ +   + H  +V LLG C  +++ KLL+Y Y   G+L   L           ++LDW TR KIAIGAA+GL+YLHH+C P ++HRDV+ ++ILLD K+E  L    L++L     ++ N ++R        A   G +   T   DVY +G VLLE+++G+  +     D     EW++
Sbjct:  817 DSFAAEIQILGNIRHRNIVKLLGYC-SNKSVKLLLYNYFPNGNLQQLLQ--------GNRNLDWETRYKIAIGAAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAILADFGLAKLMMNSPNYHNAMSRVAGSYGYIAPEYGYTMNITEKSDVYSYGVVLLEILSGRSAVEPQIGDGLHIVEWVK 993          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: ACCR4_ARATH (Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana GN=CCR4 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.531e-23
Identity = 68/198 (34.34%), Postives = 103/198 (52.02%), Query Frame = 2
Query:   26 KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTS-----DASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHD 604
            K  +++ EL+  SR++H  LV LLG   E   E++LVY+YM  G LA  LH      +     L W TRL IA+ AA G+ YLH    PP++HRD+++S+ILLD  +  ++     L   G + ++ ++             D         T   DVY FG VLLEL++G   I  ++D   R  +E+ +P+I L +
Sbjct:  492 KDSAFVNELESMSRLNHKNLVRLLG-FYEDTEERILVYEYMKNGSLADHLH------NPQFDPLSWQTRLMIALDAARGIQYLHEFIVPPVIHRDIKSSNILLDATWTAKVSDFG-LSQMGPTEEDDVSHLSLHAAGTLGYIDPEYYKFQQLTTKSDVYSFGVVLLELLSGHKAIHNNEDENPRNLVEYVVPYILLDE 681          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 3.306e-23
Identity = 76/237 (32.07%), Postives = 127/237 (53.59%), Query Frame = 2
Query:    2 KKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASN-SGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            K+++   F+    ++ E++   ++ H  LV L+G CLE E  +LLVY++M  G L + L R         Q L W TR+++A+GAA GL++LH+   P +++RD +AS+ILLD  +  +L    L+     GD + +V TR +  Q   A     +   +   DVY FG VLLEL++G+  I K+        ++   P++T  +K  L +++DP L   +  L     +A++A  C
Sbjct:  106 KRLNQEGFQGHREWLAEINYLGQLDHPNLVKLIGYCLEEE-HRLLVYEFMTRGSLENHLFR----RGTFYQPLSWNTRVRMALGAARGLAFLHN-AQPQVIYRDFKASNILLDSNYNAKLSDFGLARDGPMGD-NSHVSTRVMGTQGYAAPEYLATGHLSVKSDVYSFGVVLLELLSGRRAIDKNQPVGEHNLVDWARPYLT--NKRRLLRVMDPRL-QGQYSLTRALKIAVLALDC 332          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: ERL1_ARATH (LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.306e-23
Identity = 76/198 (38.38%), Postives = 103/198 (52.02%), Query Frame = 2
Query:   47 ELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQS--LDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWR-QTSDASNSGSSAATCAYDVYCFGKVLLELVTGK-----------LGISKSDDATTREWLEHTLPHITL 598
            EL+    + H  +V L G  L   T  LL Y YM  G L   LH        SL+   LDW TRLKIA+GAA+GL+YLHH+C P ++HRD+++S+ILLD+ FE  L       +   S  +  T  L      D   + +S      D+Y FG VLLEL+TGK           L +SK+DD T  E ++   P +T+
Sbjct:  692 ELETIGSIRHRNIVSLHGYALS-PTGNLLFYDYMENGSLWDLLH-------GSLKKVKLDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSNILLDENFEAHLSDFGIAKSIPASKTHASTYVLGTIGYIDPEYARTSRINEKSDIYSFGIVLLELLTGKKAVDNEANLHQLILSKADDNTVMEAVD---PEVTV 878          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 3.306e-23
Identity = 67/190 (35.26%), Postives = 107/190 (56.32%), Query Frame = 2
Query:   38 YMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTR-FLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLG-----ISKSDDATTREWLEHTL 583
            +  E+++ S   H  L+ L G C+   TE+LLVY YM  G +AS L        +S   LDW  R +IA+G+A GL+YLH  C+P ++HRDV+A++ILLD++FE  +G   L++L    D+H     R  +     +  ++G S+     DV+ +G +LLEL+TG+       ++  DD    +W++  L
Sbjct:  331 FQTEVEMISMAVHRNLLRLRGFCMT-PTERLLVYPYMANGSVASCLRE----RPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT--DVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 513          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: PEPR2_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR2 OS=Arabidopsis thaliana GN=PEPR2 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.639e-23
Identity = 73/233 (31.33%), Postives = 110/233 (47.21%), Query Frame = 2
Query:   17 HSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKS--DDATTREWLEHTLPHITLHDKEMLTKIIDPSLI---LDEDLLEEVWAMAIVARSC 700
            H    ++   E++    V H  L+ L    +  E + L++Y+YM  G L   LHR    E      LDW  R  IA+G + GL+YLHH+C+PP++HRD++  +IL+D   E  +G         DS  +  T           N+  +  +   DVY +G VLLELVTGK  + +S  +D     W+   L      D +    I+DP L+   LD  L E+   +  +A  C
Sbjct:  829 HIRANQNMKREIETIGLVRHRNLIRLERFWMRKE-DGLMLYQYMPNGSLHDVLHRGNQGE----AVLDWSARFNIALGISHGLAYLHHDCHPPIIHRDIKPENILMDSDMEPHIGDFGLARILDDSTVSTATVTGTTGYIAPENAYKTVRSKESDVYSYGVVLLELVTGKRALDRSFPEDINIVSWVRSVLSSYEDED-DTAGPIVDPKLVDELLDTKLREQAIQVTDLALRC 1055          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: SRF1_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana GN=SRF1 PE=2 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 7.365e-23
Identity = 72/208 (34.62%), Postives = 112/208 (53.85%), Query Frame = 2
Query:   26 KKESYMMEL-DLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSL 640
            ++E   +EL +   R+ HA +V L+G C EH +++LL+++Y   G L   LH    ++D     L W  R++IA+ AA+ L YLH  C+PP +HR+ ++++ILLDD   V +    L+ L + G   Q +  + L      A        T   DVY FG V+LEL+TG+    K  D   +  +   +P   LHD + L K++DPSL
Sbjct:  516 EEEGKFLELVNNIDRIRHANIVQLVGFCSEH-SQRLLIHEYCRNGTLHDLLH----IDDRLKIELSWNVRVRIALEAAKALEYLHEICDPPSIHRNFKSANILLDDDIRVHVSDCGLAPLISSGAVSQ-LSGQLLAAYGYGAPEFEYGIYTMKCDVYSFGVVMLELLTGRKSYDKKRDRGEQFLVRWAIPQ--LHDIDALAKMVDPSL 715          
The following BLAST results are available for this feature:
BLAST of CX287206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
PBS1_ARATH8.700e-2435.78Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
WAKLA_ARATH1.136e-2335.68Wall-associated receptor kinase-like 1 OS=Arabidop... [more]
Y5457_ARATH1.938e-2334.07Probable LRR receptor-like serine/threonine-protei... [more]
Y1341_ARATH2.531e-2335.48Probable LRR receptor-like serine/threonine-protei... [more]
ACCR4_ARATH2.531e-2334.34Serine/threonine-protein kinase-like protein CCR4 ... [more]
NAK_ARATH3.306e-2332.07Probable serine/threonine-protein kinase NAK OS=Ar... [more]
ERL1_ARATH3.306e-2338.38LRR receptor-like serine/threonine-protein kinase ... [more]
BAK1_ARATH3.306e-2335.26BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
PEPR2_ARATH5.639e-2331.33Leucine-rich repeat receptor-like protein kinase P... [more]
SRF1_ARATH7.365e-2334.62Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionC01005H06SK Veg1 Citrus clementina cDNA clone C01005H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287206 ID=CX287206; Name=CX287206; organism=Citrus clementina; type=EST; length=700bp
AAAAAAGGTCAGTCTGCATTCGTTCAAGAAAGAATCATACATGATGGAAT
TAGATTTGTTCAGCAGAGTTTCACATGCAAGACTGGTGCCACTTTTAGGC
CAATGCTTGGAGCATGAGACAGAGAAACTTTTGGTCTACAAATATATGGT
ATGTGGAGATTTGGCTAGTTCCTTGCACAGGGTTACAGATTTGGAGGATG
ACAGTTTACAATCCCTAGATTGGATTACAAGATTGAAAATTGCAATTGGT
GCGGCGGAAGGTTTATCCTACCTACATCATGAGTGTAACCCTCCTCTTGT
TCACAGAGATGTTCAAGCCAGCAGTATCCTTCTCGATGATAAATTTGAAG
TTCGACTTGGAAGCTTGAGTGAGCTTCATGCTCAAGGAGATTCACACCAA
AATGTGCTAACGAGATTTTTGTGGAGACAAACCTCTGATGCAAGCAATTC
AGGCTCCTCCGCGGCAACTTGTGCCTATGATGTGTACTGCTTTGGAAAAG
TCCTACTTGAGCTTGTAACTGGCAAGCTTGGTATTAGCAAATCAGATGAT
GCTACTACACGAGAGTGGTTGGAACATACACTACCTCACATCACTTTACA
CGACAAGGAAATGTTGACCAAGATCATCGACCCATCTCTGATTCTAGATG
AGGATCTACTGGAAGAAGTATGGGCCATGGCAATTGTAGCCAGATCATGC
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