CX287206

Overview
NameCX287206
Unique NameCX287206
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig39 contig Ccv1_Contig39:1..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.051e-13
Identity = 51/169 (30.18%), Postives = 84/169 (49.70%), Query Frame = 2
Query:   29 KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSL-DWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSDASNSGS--SAATCAYDVYCFGKVLLELVTGK 526
            +  +  E+ + +++ H  LV LLG CLE + E++LVY+++    L   +       D ++QSL DW  R KI  G A G+ YLH +    ++HRD++A +ILL D    ++         G       TR +       S   +     +   DVY FG ++LE+++GK
Sbjct:  389 EREFANEVIVVAKLQHRNLVRLLGFCLERD-ERILVYEFVPNKSLDYFIF------DSTMQSLLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLGDDMNAKIADFGMARIFGMDQTEANTRRIVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGK 550          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CRK32_ARATH (Putative cysteine-rich receptor-like protein kinase 32 OS=Arabidopsis thaliana GN=CRK32 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.051e-13
Identity = 57/184 (30.98%), Postives = 94/184 (51.09%), Query Frame = 2
Query:   32 ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSL--HRVTDLEDDSLQS-LDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLS-----ELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGIS--KSDDA 553
            + +  E+ + +++ H  LV LLG CLE + E++LVY+++    L   L  ++   L D + +S LDW  R  I  G   GL YLH +    ++HRD++AS+ILLD     ++          +    D+ + V+  F +      ++   S  +   DVY FG ++LE+V GK   S  K DD+
Sbjct:  360 QEFKNEVVIVAKLQHKNLVRLLGFCLERD-EQILVYEFVPNKSLNYFLFGNKQKHLLDPTKKSQLDWKRRYNIIGGITRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNFRVDQTEDNTRRVVGTFGYMPPEYVTHGQFSTKS---DVYSFGVLILEIVCGKKNSSFYKIDDS 539          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CRK1_ARATH (Cysteine-rich receptor-like protein kinase 1 OS=Arabidopsis thaliana GN=CRK1 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 4.051e-13
Identity = 54/173 (31.21%), Postives = 78/173 (45.09%), Query Frame = 2
Query:   32 ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSA--------ATCAYDVYCFGKVLLELVTGK 526
            + +  E++L S V H  LV LLG C     + LLVY+Y+    L   L        +++  L W  R  I IG +EGL YLH      ++HRD++ S+ILLD     ++     + + G              T  A   G  A         T   DVY FG +++E+VTGK
Sbjct:  357 DQFFNEVNLISGVQHKNLVRLLG-CSIEGPKSLLVYEYVHNRSLDQILFM-----KNTVHILSWKQRFNIIIGISEGLEYLHRGSEVKIIHRDIKTSNILLDRNLSPKIADFGLIRSMGTDKTQT-------NTGIAGTLGYLAPEYLIKGQLTEKADVYAFGVLIIEIVTGK 516          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 4.051e-13
Identity = 55/181 (30.39%), Postives = 91/181 (50.28%), Query Frame = 2
Query:    2 KKVSLHSFKKE-SYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG-----DSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGK 526
            K++S  S + E  +  E+ L +++ H  LV LLG CL+ E E++LVY+Y+    L   L      +      LDW  R KI  G A G+ YLH +    ++HRD++AS+ILLD     ++         G     ++   ++  + +     A +   S  +   DVY FG ++LE+++GK
Sbjct:  365 KRLSKSSGQGEVEFKNEVVLVAKLQHRNLVRLLGFCLDGE-ERVLVYEYVPNKSLDYFL-----FDPAKKGQLDWTRRYKIIGGVARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGLDQTEENTSRIVGTYGYMSPEYAMHGQYSMKS---DVYSFGVLVLEIISGK 536          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.290e-13
Identity = 53/170 (31.18%), Postives = 80/170 (47.06%), Query Frame = 2
Query:   38 YMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSA--------ATCAYDVYCFGKVLLELVTG 523
            ++ E+   S + H  LV L G C+E   + LL Y+YM    L+S+L      +      +DW TR KI  G A+GL++LH E     VHRD++A++ILLD     ++          +   ++ T+        A   G  A         T   DVY FG ++LE+V G
Sbjct:  722 FLNEIGAISCLQHPNLVKLHGFCVER-AQLLLAYEYMENNSLSSALFSPKHKQIP----MDWPTRFKICCGIAKGLAFLHEESPLKFVHRDIKATNILLDKDLTPKISDFGLARLDEEEKTHISTKV-------AGTIGYMAPEYALWGYLTFKADVYSFGVLVLEIVAG 879          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.910e-13
Identity = 49/167 (29.34%), Postives = 84/167 (50.30%), Query Frame = 2
Query:   32 ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGK 526
            + +M E+ L +R+ H  LV +LG C+E + EK+L+Y+Y+    L S L   T         L+W  R  I  G A GL YLH +    ++HRD++ S+ILLD     ++    ++ +  + ++  N +             +     +   DV+ FG ++LE+V+GK
Sbjct:  567 DEFMNEVTLIARLQHINLVQVLGCCIEGD-EKMLIYEYLENLSLDSYLFGKT-----RRSKLNWNERFDITNGVARGLLYLHQDSRFRIIHRDLKVSNILLDKNMIPKISDFGMARIFERDETEANTMKVVGTYGYMSPEYAMYGIFSEKSDVFSFGVIVLEIVSGK 727          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y5830_ARATH (Probable inactive receptor kinase At5g58300 OS=Arabidopsis thaliana GN=At5g58300 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.179e-12
Identity = 59/236 (25.00%), Postives = 111/236 (47.03%), Query Frame = 2
Query:   29 KESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAA--------TCAYDVYCFGKVLLELVTGKLGI---SKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            K  +  ++++ SRV +H  +VPL       + EKL+V  Y   G+L+S LH     E   L   DW +R+KI + AA+G+++LH    P   H ++++S++++  + +  +                LT  +    +    +G  A         T   DVY FG ++LE++TGK  +   S+ D      W++  +       +E  +++ D  L+  +++ EE+  M  +A +C
Sbjct:  395 KREFEQQMEIISRVGNHPSVVPLRAYYYSKD-EKLMVCDYYPAGNLSSLLHGNRGSEKTPL---DWDSRVKITLSAAKGIAHLHAAGGPKFSHGNIKSSNVIMKQESDACISDFG------------LTPLMAVPIAPMRGAGYRAPEVMETRKHTHKSDVYSFGVLILEMLTGKSPVQSPSRDDMVDLPRWVQSVV------REEWTSEVFDIELMRFQNIEEEMVQMLQIAMAC 608          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CCR35_ARATH (Serine/threonine-protein kinase-like protein At3g51990 OS=Arabidopsis thaliana GN=At3g51990 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.179e-12
Identity = 49/171 (28.65%), Postives = 83/171 (48.54%), Query Frame = 2
Query:   47 ELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSDASNSG--------SSAATCAYDVYCFGKVLLELVTGKLGI 535
            E ++ SR+   R V LLG   ++  E LLV ++M  G L   +H  T L   ++ S  W  R+KIA+  A+ +  LH +   P++HRD++++++L+D     +LG            Q V      + T  A   G        +   +   DV+ FG +LLE+++G+  I
Sbjct:  101 EFEILSRIRSPRFVNLLGFSADNSKEPLLVVEFMGNGSLYDVIHSDTVLNSGAISS--WSKRIKIALQIAKAVHLLHSQ-ETPIIHRDIKSANVLMDKNLNAKLGDFGLAIRCNVDDQKV------KSTPPAGTMGYLDPDYVTADRLSTKTDVFSFGILLLEIISGRKAI 262          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: EFR_ARATH (LRR receptor-like serine/threonine-protein kinase EFR OS=Arabidopsis thaliana GN=EFR PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.539e-12
Identity = 60/184 (32.61%), Postives = 92/184 (50.00%), Query Frame = 2
Query:   32 ESYMMELDLFSRVSHARLVPLLGQCLEHETE----KLLVYKYMVCGDLASSLHRVTDLE--DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASNSGS-----------SAATCAYDVYCFGKVLLELVTGK 526
            +S+M E + F  + H  LV L+  C   ++E    + LVY++M  G L   L ++ DLE  +D  +SL    +L IAI  A  L YLH  C+ P+ H D++ S+ILLDD     +    L++L  + D  ++ L +F     S A   G+              +   DVY FG +LLE+ +GK
Sbjct:  752 KSFMAECETFKGIRHRNLVKLITVCSSLDSEGNDFRALVYEFMPKGSLDMWL-QLEDLERVNDHSRSLTPAEKLNIAIDVASALEYLHVHCHDPVAHCDIKPSNILLDDDLTAHVSDFGLAQLLYKYD-RESFLNQF-----SSAGVRGTIGYAAPEYGMGGQPSIQGDVYSFGILLLEMFSGK 928          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.539e-12
Identity = 59/184 (32.07%), Postives = 89/184 (48.37%), Query Frame = 2
Query:    2 KKVSLHSFKKES-YMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQS-LDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAY--------DVYCFGKVLLELVTG 523
            K++S +S + E  +  E+ + +++ H  LV LLG CLE E EK+LVY+++    L   L       D ++Q  LDW  R KI  G A G+ YLH +    ++HRD++A +ILLD     ++         G       TR +          G  A   A         DVY FG ++LE+V+G
Sbjct:  372 KRLSKNSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGE-EKILVYEFVPNKSLDYFLF------DPTMQGQLDWSRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFGMDQTEANTRRV------VGTYGYMAPEYAMYGKFSMKSDVYSFGVLVLEIVSG 542          
The following BLAST results are available for this feature:
BLAST of CX287206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
CRK4_ARATH4.051e-1330.18Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]
CRK32_ARATH4.051e-1330.98Putative cysteine-rich receptor-like protein kinas... [more]
CRK1_ARATH4.051e-1331.21Cysteine-rich receptor-like protein kinase 1 OS=Ar... [more]
CRK10_ARATH4.051e-1330.39Cysteine-rich receptor-like protein kinase 10 OS=A... [more]
RKF1_ARATH5.290e-1331.18Probable LRR receptor-like serine/threonine-protei... [more]
SRK6_BRAOE6.910e-1329.34Putative serine/threonine-protein kinase receptor ... [more]
Y5830_ARATH1.179e-1225.00Probable inactive receptor kinase At5g58300 OS=Ara... [more]
CCR35_ARATH1.179e-1228.65Serine/threonine-protein kinase-like protein At3g5... [more]
EFR_ARATH1.539e-1232.61LRR receptor-like serine/threonine-protein kinase ... [more]
CRK20_ARATH1.539e-1232.07Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionC01005H06SK Veg1 Citrus clementina cDNA clone C01005H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287206 ID=CX287206; Name=CX287206; organism=Citrus clementina; type=EST; length=700bp
AAAAAAGGTCAGTCTGCATTCGTTCAAGAAAGAATCATACATGATGGAAT
TAGATTTGTTCAGCAGAGTTTCACATGCAAGACTGGTGCCACTTTTAGGC
CAATGCTTGGAGCATGAGACAGAGAAACTTTTGGTCTACAAATATATGGT
ATGTGGAGATTTGGCTAGTTCCTTGCACAGGGTTACAGATTTGGAGGATG
ACAGTTTACAATCCCTAGATTGGATTACAAGATTGAAAATTGCAATTGGT
GCGGCGGAAGGTTTATCCTACCTACATCATGAGTGTAACCCTCCTCTTGT
TCACAGAGATGTTCAAGCCAGCAGTATCCTTCTCGATGATAAATTTGAAG
TTCGACTTGGAAGCTTGAGTGAGCTTCATGCTCAAGGAGATTCACACCAA
AATGTGCTAACGAGATTTTTGTGGAGACAAACCTCTGATGCAAGCAATTC
AGGCTCCTCCGCGGCAACTTGTGCCTATGATGTGTACTGCTTTGGAAAAG
TCCTACTTGAGCTTGTAACTGGCAAGCTTGGTATTAGCAAATCAGATGAT
GCTACTACACGAGAGTGGTTGGAACATACACTACCTCACATCACTTTACA
CGACAAGGAAATGTTGACCAAGATCATCGACCCATCTCTGATTCTAGATG
AGGATCTACTGGAAGAAGTATGGGCCATGGCAATTGTAGCCAGATCATGC
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