CX287206

Overview
NameCX287206
Unique NameCX287206
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig39 contig Ccv1_Contig39:1..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CRK13_ARATH (Cysteine-rich receptor-like protein kinase 13 OS=Arabidopsis thaliana GN=CRK13 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.539e-12
Identity = 54/180 (30.00%), Postives = 84/180 (46.67%), Query Frame = 2
Query:   29 KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAA--------TCAYDVYCFGKVLLELVTGKLGISKS 544
            K+ +  E+ L +++ H  LV LLG  ++ E EK++VY+Y+    L   L   T   +     LDW  R KI  G A G+ YLH +  P ++HRD++A +ILLD     ++         G      +T       + A   G  A         +   DVY +G ++LE++ GK   S S
Sbjct:  396 KKEFKNEVVLVAKLQHRNLVRLLGFSVKGE-EKIIVYEYLPNRSLDYILFDPTKQGE-----LDWKKRYKIIGGTARGILYLHQDSQPTIIHRDLKAGNILLDAHMNPKVADFGTARIFGMDQSVAIT------ANAAGTPGYMAPEYMELGEFSMKSDVYSYGVLVLEIICGKRNTSFS 563          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: IRAK1_MOUSE (Interleukin-1 receptor-associated kinase 1 OS=Mus musculus GN=Irak1 PE=1 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12
Identity = 50/184 (27.17%), Postives = 85/184 (46.20%), Query Frame = 2
Query:   29 KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAY---------------DVYCFGKVLLELVTGKLGI 535
            K+S++ E++  SR  H  +V   G C E      LVY ++  G L   LH    L+  +   L W  RL I +G A  + +LH + +P L+H D+++S++LLD++   +LG        G +  +        Q+S  + + +   T AY               D + FG V+LE + G+  +
Sbjct:  253 KQSFLTEVEQLSRFRHPNIVDFAGYCAESGLY-CLVYGFLPNGSLEDQLH----LQTQACSPLSWPQRLDILLGTARAIQFLHQD-SPSLIHGDIKSSNVLLDERLMPKLGDF------GLARFSRFAGAKASQSSTVARTSTVRGTLAYLPEEYIKTGRLAVDTDTFSFGVVILETLAGQRAV 424          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12
Identity = 65/223 (29.15%), Postives = 105/223 (47.09%), Query Frame = 2
Query:    2 KKVSLHSFKKES-YMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQS--LDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSH------QNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGK--LGISKSDDA------TTREWLEHTLPHITLHDKEMLT 619
            K++S ++ + E+ +  E  L +++ H  LV LLG  +E  TE+LLVY+++    L   +        D +Q   L+W  R KI  G A GL YLH +    ++HRD++AS+ILLD++   ++            H        ++  F +       +   S  T   DVY FG ++LE+++GK   G S  D          R W E     + L DK ++T
Sbjct:  372 KRLSKNAQQGETEFKNEFLLVAKLQHRNLVKLLGYSIEG-TERLLVYEFLPHTSLDKFIF-------DPIQGNELEWEIRYKIIGGVARGLLYLHQDSRLRIIHRDLKASNILLDEEMTPKIADFGMARLFDIDHTTQRYTNRIVGTFGYMAPEYVMHGQFSFKT---DVYSFGVLVLEIISGKKNSGFSSEDSMGDLISFAWRNWKEGVA--LNLVDKILMT 581          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: IMK3_ARATH (Probable leucine-rich repeat receptor-like protein kinase IMK3 OS=Arabidopsis thaliana GN=IMK3 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.626e-12
Identity = 57/210 (27.14%), Postives = 97/210 (46.19%), Query Frame = 2
Query:   29 KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLH-RVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILD 649
            ++ +  E+++  R+ H  L+ L    L  + EKL+V+ YM  G LA+ LH R  D+       ++W TR+ +  G A GL YLH   N  ++H ++ +S++LLD+    ++    LS L         + T       +   +    A T   DVY  G ++LEL+TGK      +     +W+       T   +E   ++ D  L+ D
Sbjct:  526 QKEFENEINVLGRIRHPNLLALRAYYLGPKGEKLVVFDYMSRGSLATFLHARGPDVH------INWPTRMSLIKGMARGLFYLHTHAN--IIHGNLTSSNVLLDENITAKISDYGLSRLMTAAAGSSVIATAGALGYRAPELSKLKKANT-KTDVYSLGVIILELLTGKSPSEALNGVDLPQWV------ATAVKEEWTNEVFDLELLND 720          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CRK43_ARATH (Putative cysteine-rich receptor-like protein kinase 43 OS=Arabidopsis thaliana GN=CRK43 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.626e-12
Identity = 51/167 (30.54%), Postives = 80/167 (47.90%), Query Frame = 2
Query:   47 ELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSA--------ATCAYDVYCFGKVLLELVTG 523
            E+D+ SR  H  LV LLG C  +     +VY+++    L   L        +  + LDW  R  I +G AEGL YLH  C   ++HRD++AS+ILLD K++ ++          +  +++    L   +S A   G  A         +   D Y FG ++LE+ +G
Sbjct:  375 EIDVISRCQHKNLVRLLGCCFTN-MNSFIVYEFLANTSLDHIL-----FNPEKKKELDWKKRRTIILGTAEGLEYLHETCK--IIHRDIKASNILLDLKYKPKISDFGLAKFYPEGGKDIPASSL-SPSSIAGTLGYMAPEYISKGRLSNKIDAYSFGVLVLEITSG 532          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CRK22_ARATH (Cysteine-rich receptor-like protein kinase 22 OS=Arabidopsis thaliana GN=CRK22 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.626e-12
Identity = 57/192 (29.69%), Postives = 97/192 (50.52%), Query Frame = 2
Query:    5 KVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQN---VLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGIS--KSDDATT 559
            KVS    KK  +  E  L S++ H  L  LLG CL+ +  K L+Y++++   L   L      + +    LDW  R KI  G A+G+ +LH +    +++RD +AS+ILLD     ++    ++ +    +S  N   +   F++     A +   S  +   DVY FG ++LE+++GK   S  ++D+ TT
Sbjct:  385 KVSGQDTKK--FRNEAVLVSKIQHRNLARLLGFCLQGDG-KFLIYEFVLNKSLDYFL-----FDPEKQGELDWTRRYKIIGGIAQGILHLHQDPQLTIIYRDFKASNILLDADMNPKISDFGMATVFGMEESRGNTNWIAETFVYMSPEYAVHGKFSMKS---DVYSFGILILEIISGKKNSSLYQNDETTT 565          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y3868_ARATH (Probable inactive receptor kinase At3g08680 OS=Arabidopsis thaliana GN=At3g08680 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.429e-12
Identity = 59/229 (25.76%), Postives = 107/229 (46.72%), Query Frame = 2
Query:   29 KESYMMELDLFSRVS-HARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLG---ISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDE-DLLEEVWAMAIVARSC 700
            K  +  +++   R+S H  + PL       + EKLLVY Y   G+ +  LH      +    +LDW TRL+I + AA G+S++H      L+H ++++ ++LL  +  V +     +      H  + +R L  +  +A  +     T   DVY FG +LLE++TGK         +     +W++  +       +E   ++ D  LI  + ++ EE+  M  +A +C
Sbjct:  378 KREFEQQMEAVGRISPHVNVAPLRAYYFSKD-EKLLVYDYYQGGNFSMLLH---GNNEGGRAALDWETRLRICLEAARGISHIHSASGAKLLHGNIKSPNVLLTQELHVCVSDFG-IAPLMSHHTLIPSRSLGYRAPEAIETRKH--TQKSDVYSFGVLLLEMLTGKAAGKTTGHEEVVDLPKWVQSVV------REEWTGEVFDVELIKQQHNVEEEMVQMLQIAMAC 593          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: TMKL1_ARATH (Putative kinase-like protein TMKL1 OS=Arabidopsis thaliana GN=TMKL1 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.479e-12
Identity = 51/158 (32.28%), Postives = 75/158 (47.47%), Query Frame = 2
Query:   65 RVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSDASNSGS----SAATCAYDVYCFGKVLLELVTGK 526
            R+ H  LVPL         EKLL+Y Y+       SLH +         +L+W  R KIA+G A GL+YLH     P++H ++++ ++L+DD F  R   L+E        Q V    + +  SD   +             DVY FG +LLE++ GK
Sbjct:  423 RIRHENLVPLRAFYQGKRGEKLLIYDYLP----NISLHDLLHESKPRKPALNWARRHKIALGIARGLAYLHTGQEVPIIHGNIRSKNVLVDDFFFAR---LTEFGLDKIMVQAVADEIVSQAKSDGYKAPELHKMKKCNPRSDVYAFGILLLEILMGK 573          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CRK37_ARATH (Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana GN=CRK37 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.479e-12
Identity = 50/165 (30.30%), Postives = 84/165 (50.91%), Query Frame = 2
Query:   47 ELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVR-----LGSLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGK 526
            E+ L +R+ H  LV LLG C E + E++LVY+++    L   +      +++  + L W  R  I  G A GL YLH +    ++HRD++AS+ILLD +   +     +  L ++         V+  + +     A+    S  +   DVY FG +LLE+++GK
Sbjct:  389 EVLLLTRLQHRNLVKLLGFCNEKD-EEILVYEFVPNSSLDHFI-----FDEEKRRVLTWDVRYTIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVADFGMARLFDMDETRGQTSRVVGTYGYMAPEYATYGQFSTKS---DVYSFGVMLLEMISGK 544          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.479e-12
Identity = 57/213 (26.76%), Postives = 100/213 (46.95%), Query Frame = 2
Query:   47 ELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVR-----LGSLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDA----TTREWLEHTL-----PHITLHDKEMLTKIIDPSLI 643
            E+ L +R+ H  LV LLG C E   E++LVY+++    L   +      ++D    L W  R +I  G A GL YLH +    ++HRD++AS+ILLD +   +     +  L  +         V+  + +       +   SA +   DVY FG +LLE+++G+   +   +       + W+E  L     P++  + +  + K+I   L+
Sbjct:  384 EVLLLTRLQHRNLVKLLGFCNEGN-EEILVYEHVPNSSLDHFI-----FDEDKRWLLTWDVRYRIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVADFGMARLFNMDETRGETSRVVGTYGYMAPEYVRHGQFSAKS---DVYSFGVMLLEMISGEKNKNFETEGLPAFAWKRWIEGELESIIDPYLNENPRNEIIKLIQIGLL 587          
The following BLAST results are available for this feature:
BLAST of CX287206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
CRK13_ARATH1.539e-1230.00Cysteine-rich receptor-like protein kinase 13 OS=A... [more]
IRAK1_MOUSE2.010e-1227.17Interleukin-1 receptor-associated kinase 1 OS=Mus ... [more]
CRK26_ARATH2.010e-1229.15Cysteine-rich receptor-like protein kinase 26 OS=A... [more]
IMK3_ARATH2.626e-1227.14Probable leucine-rich repeat receptor-like protein... [more]
CRK43_ARATH2.626e-1230.54Putative cysteine-rich receptor-like protein kinas... [more]
CRK22_ARATH2.626e-1229.69Cysteine-rich receptor-like protein kinase 22 OS=A... [more]
Y3868_ARATH3.429e-1225.76Probable inactive receptor kinase At3g08680 OS=Ara... [more]
TMKL1_ARATH4.479e-1232.28Putative kinase-like protein TMKL1 OS=Arabidopsis ... [more]
CRK37_ARATH4.479e-1230.30Cysteine-rich receptor-like protein kinase 37 OS=A... [more]
CRK36_ARATH4.479e-1226.76Cysteine-rich receptor-like protein kinase 36 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC01005H06SK Veg1 Citrus clementina cDNA clone C01005H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287206 ID=CX287206; Name=CX287206; organism=Citrus clementina; type=EST; length=700bp
AAAAAAGGTCAGTCTGCATTCGTTCAAGAAAGAATCATACATGATGGAAT
TAGATTTGTTCAGCAGAGTTTCACATGCAAGACTGGTGCCACTTTTAGGC
CAATGCTTGGAGCATGAGACAGAGAAACTTTTGGTCTACAAATATATGGT
ATGTGGAGATTTGGCTAGTTCCTTGCACAGGGTTACAGATTTGGAGGATG
ACAGTTTACAATCCCTAGATTGGATTACAAGATTGAAAATTGCAATTGGT
GCGGCGGAAGGTTTATCCTACCTACATCATGAGTGTAACCCTCCTCTTGT
TCACAGAGATGTTCAAGCCAGCAGTATCCTTCTCGATGATAAATTTGAAG
TTCGACTTGGAAGCTTGAGTGAGCTTCATGCTCAAGGAGATTCACACCAA
AATGTGCTAACGAGATTTTTGTGGAGACAAACCTCTGATGCAAGCAATTC
AGGCTCCTCCGCGGCAACTTGTGCCTATGATGTGTACTGCTTTGGAAAAG
TCCTACTTGAGCTTGTAACTGGCAAGCTTGGTATTAGCAAATCAGATGAT
GCTACTACACGAGAGTGGTTGGAACATACACTACCTCACATCACTTTACA
CGACAAGGAAATGTTGACCAAGATCATCGACCCATCTCTGATTCTAGATG
AGGATCTACTGGAAGAAGTATGGGCCATGGCAATTGTAGCCAGATCATGC
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