CX287206

Overview
NameCX287206
Unique NameCX287206
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig39 contig Ccv1_Contig39:1..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 4.479e-12
Identity = 56/190 (29.47%), Postives = 86/190 (45.26%), Query Frame = 2
Query:   32 ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTR-----FLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGIS------KSDDATTREW 568
            + +  E+ L +++ H  LV LLG CLE E EK+LVY+++    L   L   T         LDW  R  I  G   G+ YLH +    ++HRD++AS+ILLD     ++         G       T+     F +       +   S  +   DVY FG ++LE++ GK   S      K+++  T  W
Sbjct:  406 QEFKNEVVLVAKLQHRNLVKLLGYCLEPE-EKILVYEFVPNKSLDYFLFDPT-----KQGQLDWTKRYNIIGGITRGILYLHQDSRLTIIHRDLKASNILLDADMIPKIADFGMARISGIDQSVANTKRIAGTFGYMPPEYVIHGQFSMKS---DVYSFGVLILEIICGKKNRSFYQADTKAENLVTYVW 586          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y3475_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.849e-12
Identity = 65/225 (28.89%), Postives = 102/225 (45.33%), Query Frame = 2
Query:   32 ESYMMELDLFSRVSHARLVPLLGQCLEHETE----KLLVYKYMVCGDLASSLH--RVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASNSGS-SAATCAY----------DVYCFGKVLLELVTGKLGISK--SDDATTREWLEHTLPHITLHDKEMLTKIIDPSLI 643
            +S+M E +    + H  LV LL  C   + +    + L+Y++M  G L   LH   V ++   S ++L  + RL IAI  A  L YLH  C+ P+ H D++ S++LLDD     +    L+ L  + D          + Q S A   G+   A   Y          DVY FG +LLE+ TGK   ++    + T   + +  LP       E +  I+D S++
Sbjct:  742 KSFMAECESLKDIRHRNLVKLLTACSSIDFQGNEFRALIYEFMPNGSLDMWLHPEEVEEIHRPS-RTLTLLERLNIAIDVASVLDYLHVHCHEPIAHCDLKPSNVLLDDDLTAHVSDFGLARLLLKFDEES------FFNQLSSAGVRGTIGYAAPEYGVGGQPSINGDVYSFGILLLEMFTGKRPTNELFGGNFTLNSYTKSALP-------ERILDIVDESIL 952          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CRK31_ARATH (Putative cysteine-rich receptor-like protein kinase 31 OS=Arabidopsis thaliana GN=CRK31 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.849e-12
Identity = 51/171 (29.82%), Postives = 84/171 (49.12%), Query Frame = 2
Query:   32 ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQS-LDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLS-----ELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGK 526
            + +  E+ + +++ H  LV LLG C+E + E++LVY+++    L   L       D  ++S LDW  R  I  G   GL YLH +    ++HRD++AS+ILLD     ++          +    D    V+  F +      ++   S  +   DVY FG ++LE+V GK
Sbjct:  378 QEFKNEVVIVAKLQHKNLVRLLGFCIERD-EQILVYEFVSNKSLDYFLF------DPKMKSQLDWKRRYNIIGGVTRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNFRVDQTEDQTGRVVGTFGYMPPEYVTHGQFSTKS---DVYSFGVLILEIVCGK 538          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CRK30_ARATH (Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana GN=CRK30 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.849e-12
Identity = 56/181 (30.94%), Postives = 89/181 (49.17%), Query Frame = 2
Query:    2 KKVSLHSFKKE-SYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL-----HAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGK 526
            K++S  S + E  +  E+ L +++ H  LV LLG  L+ E EK+LV++++    L   L   T+        LDW  R  I  G   GL YLH +    ++HRD++AS+ILLD     ++           H   DS   V+  F +      ++   S  +   DVY FG ++LE+V+G+
Sbjct:  374 KRLSRTSDQGELEFKNEVLLVAKLQHRNLVRLLGFALQGE-EKILVFEFVPNKSLDYFLFGSTNPTKKG--QLDWTRRYNIIGGITRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNFRDHQTEDSTGRVVGTFGYMPPEYVAHGQFSTKS---DVYSFGVLILEIVSGR 548          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CRK16_ARATH (Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 5.849e-12
Identity = 58/210 (27.62%), Postives = 97/210 (46.19%), Query Frame = 2
Query:   29 KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLS-----ELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSD-DATTREWLEHTLPHITLHDKEMLTKIIDPSL 640
            +E +  E+ L +++ H  LV LLG  +E E EK+LVY+YM    L   L      +      LDW TR  I  G   G+ YLH +    ++HRD++A +ILLD     ++          +     +   V+  F +      +N   S  +   DVY FG ++LE++ GK   S  + D +    + +      L + E   +++DP++
Sbjct:  373 EEEFKNEVLLVAKLQHRNLVRLLGFSVEGE-EKILVYEYMPNKSLDYFL-----FDHRRRGQLDWRTRYNIIRGVTRGILYLHQDSRLTIIHRDLKAGNILLDVDMNPKIADFGVARNFRVDQTEATTGRVVGTFGYMPPEYVANGQFSMKS---DVYSFGVLILEIIVGKKSSSFHEIDGSVGNLVTYVW---RLWNNESFLELVDPAM 570          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y5005_ARATH (Probable receptor-like protein kinase At5g20050 OS=Arabidopsis thaliana GN=At5g20050 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.639e-12
Identity = 72/245 (29.39%), Postives = 111/245 (45.31%), Query Frame = 2
Query:    2 KKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEK--LLVYKYMVCGDLASSLHRVTDLEDDSLQS-LDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE--VRLGSLSELHAQGDSHQNVLTRFLWRQTSDAS----NSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHD--KEMLTKIIDPSLI-LDEDLLEEVWAMAIVARSC 700
            K++      +  +  E+   + V H  LV L G        +   LVY Y+V   L   +         S    L W  R ++AI  A+ L+YLHH+C   ++H DV+  +ILLD+ F   V    LS+L A+ +S   VLT     +   A       G S  +   DVY +G VLLE++ G+  IS+ +   T++      P I      +  + +I+D  LI ++E   EEV  +  VA  C
Sbjct:  131 KRIEGEEKGEREFRSEVAAIASVQHKNLVRLYGYSSSTSANRPRFLVYDYIVNSSLDIWIFPDRGNRGRSGGGCLSWEQRYQVAIDVAKALAYLHHDCRSKILHLDVKPENILLDENFRAVVTDFGLSKLIARDES--RVLTDIRGTRGYLAPEWLLEHGISEKS---DVYSYGIVLLEMIGGRRSISRVEVKETKKKKLEYFPRIVNQKMRERKIMEIVDQRLIEVNEVDEEEVMKLVCVALWC 370          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: IMK2_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase IMK2 OS=Arabidopsis thaliana GN=IMK2 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.639e-12
Identity = 55/179 (30.73%), Postives = 90/179 (50.28%), Query Frame = 2
Query:   47 ELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLT--RFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWL 571
            E+    ++ H  L+ L    L  + EKLLV+ YM  G L++ LH       ++L  + W TR+KIA G + GL++LH   N  ++H ++ AS+ILLD++    +    LS L     +   + T     +R    +    +SA T   DVY  G ++LEL+TGK     ++     +W+
Sbjct:  581 EVTALGKIRHQNLLALRAYYLGPKGEKLLVFDYMSKGSLSAFLHA---RGPETL--IPWETRMKIAKGISRGLAHLH--SNENMIHENLTASNILLDEQTNAHIADYGLSRLMTAAAATNVIATAGTLGYRAPEFSKIKNASAKT---DVYSLGIIILELLTGKSPGEPTNGMDLPQWV 749          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y1124_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g12460 OS=Arabidopsis thaliana GN=At1g12460 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.977e-12
Identity = 54/176 (30.68%), Postives = 90/176 (51.14%), Query Frame = 2
Query:   29 KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLH-RVTDLEDDSLQSLD--WITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSD-----ASNSGSSAATCAYDVYCFGKVLLELVTGK 526
            +E +  E+     + H  L    G      T +L++ +++  G L  +LH R+      S  + D  W  R +IA+G A+ LS+LH++C P ++H +V++++ILLD+++E +L    L +     DS    LT+             A  S  ++  C  DVY +G VLLELVTG+
Sbjct:  632 QEEFEQEIGRLGGLQHPNLSSFQGYYFS-STMQLILSEFVPNGSLYDNLHLRIFPGTSSSYGNTDLNWHRRFQIALGTAKALSFLHNDCKPAILHLNVKSTNILLDERYEAKLSDYGLEKFLPVMDSFG--LTKKFHNAVGYIAPELAQQSLRASEKC--DVYSYGVVLLELVTGR 802          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CRK14_ARATH (Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana GN=CRK14 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 9.977e-12
Identity = 62/220 (28.18%), Postives = 97/220 (44.09%), Query Frame = 2
Query:   47 ELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFL--WRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            E+ + +++ H  LV LLG CLE E EK+LVY+++    L   L   T         LDW  R  I  G   G+ YLH +    ++HRD++AS+ILLD     ++         G       T+ +   R             +   DVY FG ++LE++ G+         TT E L      +  +D  +  +++DP+ I +    EEV     +A  C
Sbjct:  380 EVVVVAKLHHRNLVKLLGFCLEGE-EKILVYEFVPNKSLDYFLFDPT-----KQGQLDWTKRYNIIRGITRGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGIDQSGANTKKIAGTRGYMPPEYVRQGQFSTRSDVYSFGVLVLEIICGRNNRFIHQSDTTVENLVTYAWRLWRNDSPL--ELVDPT-ISENCETEEVTRCIHIALLC 590          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y5168_ARATH (Probably inactive receptor-like protein kinase At5g41680 OS=Arabidopsis thaliana GN=At5g41680 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.303e-11
Identity = 62/247 (25.10%), Postives = 105/247 (42.51%), Query Frame = 2
Query:   29 KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLH--------------------RVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGK---LGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            +  +  ++++  R+ H  +  L       + +KL VY Y   G+L   LH                      +    +S   LDW +RL+IAIGAA GL+ +H   +   VH ++++S+I  + K    +  L   H      Q  L R       + +++  S  T   DVY FG VLLEL+TGK     +S  ++     W+   +       KE   ++ D  L++   + EE+  M  +  +C
Sbjct:   96 RREFEQQMEIVGRIRHDNVAELKAYYYS-KIDKLAVYSYYSQGNLFEMLHGKLSFCIPLSMLLWYAVSKTNNSTFAGESQVPLDWESRLRIAIGAARGLAIIHEADDGKFVHGNIKSSNIFTNSKCYGCICDLGLTHITKSLPQTTL-RSSGYHAPEITDTRKS--TQFSDVYSFGVVLLELLTGKSPASPLSLDENMDLASWIRSVV------SKEWTGEVFDNELMMQMGIEEELVEMLQIGLAC 332          
The following BLAST results are available for this feature:
BLAST of CX287206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
CRK12_ARATH4.479e-1229.47Putative cysteine-rich receptor-like protein kinas... [more]
Y3475_ARATH5.849e-1228.89Probable LRR receptor-like serine/threonine-protei... [more]
CRK31_ARATH5.849e-1229.82Putative cysteine-rich receptor-like protein kinas... [more]
CRK30_ARATH5.849e-1230.94Putative cysteine-rich receptor-like protein kinas... [more]
CRK16_ARATH5.849e-1227.62Putative cysteine-rich receptor-like protein kinas... [more]
Y5005_ARATH7.639e-1229.39Probable receptor-like protein kinase At5g20050 OS... [more]
IMK2_ARATH7.639e-1230.73Probably inactive leucine-rich repeat receptor-lik... [more]
Y1124_ARATH9.977e-1230.68Probable LRR receptor-like serine/threonine-protei... [more]
CRK14_ARATH9.977e-1228.18Cysteine-rich receptor-like protein kinase 14 OS=A... [more]
Y5168_ARATH1.303e-1125.10Probably inactive receptor-like protein kinase At5... [more]

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Properties
Property NameValue
Genbank descriptionC01005H06SK Veg1 Citrus clementina cDNA clone C01005H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287206 ID=CX287206; Name=CX287206; organism=Citrus clementina; type=EST; length=700bp
AAAAAAGGTCAGTCTGCATTCGTTCAAGAAAGAATCATACATGATGGAAT
TAGATTTGTTCAGCAGAGTTTCACATGCAAGACTGGTGCCACTTTTAGGC
CAATGCTTGGAGCATGAGACAGAGAAACTTTTGGTCTACAAATATATGGT
ATGTGGAGATTTGGCTAGTTCCTTGCACAGGGTTACAGATTTGGAGGATG
ACAGTTTACAATCCCTAGATTGGATTACAAGATTGAAAATTGCAATTGGT
GCGGCGGAAGGTTTATCCTACCTACATCATGAGTGTAACCCTCCTCTTGT
TCACAGAGATGTTCAAGCCAGCAGTATCCTTCTCGATGATAAATTTGAAG
TTCGACTTGGAAGCTTGAGTGAGCTTCATGCTCAAGGAGATTCACACCAA
AATGTGCTAACGAGATTTTTGTGGAGACAAACCTCTGATGCAAGCAATTC
AGGCTCCTCCGCGGCAACTTGTGCCTATGATGTGTACTGCTTTGGAAAAG
TCCTACTTGAGCTTGTAACTGGCAAGCTTGGTATTAGCAAATCAGATGAT
GCTACTACACGAGAGTGGTTGGAACATACACTACCTCACATCACTTTACA
CGACAAGGAAATGTTGACCAAGATCATCGACCCATCTCTGATTCTAGATG
AGGATCTACTGGAAGAAGTATGGGCCATGGCAATTGTAGCCAGATCATGC
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