CX287206

Overview
NameCX287206
Unique NameCX287206
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig39 contig Ccv1_Contig39:1..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.303e-11
Identity = 52/167 (31.14%), Postives = 77/167 (46.11%), Query Frame = 2
Query:   47 ELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAY--------DVYCFGKVLLELVTG 523
            E+ + +++ H  LV LLG CLE E EK+LVY+++    L   L   T       + LDW  R KI  G A G+ YLH +    ++HRD++A +ILLD     ++         G       TR +          G  A   A         DVY FG ++ E+++G
Sbjct:  552 EVVVVAKLQHRNLVRLLGYCLEGE-EKILVYEFVHNKSLDYFLFDTT-----MKRQLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFGMDQTEANTRRV------VGTYGYMAPEYAMYGQFSMKSDVYSFGVLVFEIISG 706          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: IRAK1_BOVIN (Interleukin-1 receptor-associated kinase 1 OS=Bos taurus GN=IRAK1 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.223e-11
Identity = 51/184 (27.72%), Postives = 84/184 (45.65%), Query Frame = 2
Query:   29 KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAY---------------DVYCFGKVLLELVTGKLGI 535
            K+S+  E+   SR  H  +V   G C +      LVY ++  G L   LH    ++  +   L W  RL I +G A  + +LH + +P L+H DV++S++LLD++   +LG        G +  +  T     Q+S  + + +   T AY               D + FG VLLE + G+  +
Sbjct:  253 KQSFQTEVQQLSRFRHPNIVDFAGYCAQSGFY-CLVYGFLPNGSLEDRLH----VQTQAWPPLSWPQRLDILLGTARAIQFLHQD-SPSLIHGDVKSSNVLLDERLMPKLGDF------GLARLSRFTGANPGQSSSVARTRTVRGTLAYLPEEYVKTGRLAVDTDTFSFGVVLLETLAGQRAV 424          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CRK15_ARATH (Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.223e-11
Identity = 54/184 (29.35%), Postives = 88/184 (47.83%), Query Frame = 2
Query:   47 ELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQN---VLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGIS-----KSDDATTREW 568
            E+ + +++ H  LV LLG  +    E++LVY+YM    L   L      +      LDW  R K+  G A G+ YLH +    ++HRD++AS+ILLD     +L    L+ +     + +N   ++  F +     A +   S  +   DVY FG ++LE+++GK   S      + D  T  W
Sbjct:  381 EVVVVAKLQHRNLVRLLGFSIGGG-ERILVYEYMPNKSLDYFL-----FDPAKQNQLDWTRRYKVIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKLADFGLARIFGMDQTQENTSRIVGTFGYMAPEYAIHGQFSVKS---DVYSFGVLVLEIISGKKNNSFYETDGAHDLVTHAW 555          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CRK21_ARATH (Cysteine-rich receptor-like protein kinase 21 OS=Arabidopsis thaliana GN=CRK21 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.903e-11
Identity = 61/220 (27.73%), Postives = 103/220 (46.82%), Query Frame = 2
Query:    2 KKVSLHSFKKE-SYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLS-----ELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGIS-KSDDATTREWLEHTLPHITLHDKEMLTKIIDPSL 640
            K++S  S + E  +  E+ L +R+ H  LV LLG  +E E EK+LVY+++    L   L      +      LDW  R  I  G   G+ YLH +    ++HRD++AS+ILLD +   ++          ++    +   V+  F +      +N   S  +   DVY FG ++LE++ GK   S    D +    + H      L +   L +++DP++
Sbjct:  391 KRLSKPSDQGEPEFKNEVLLVARLQHKNLVGLLGFSVEGE-EKILVYEFVPNKSLDHFL-----FDPIKRVQLDWPRRHNIIEGITRGILYLHQDSRLTIIHRDLKASNILLDAEMNPKIADFGLARNFRVNQTEANTGRVVGTFGYMPPEYVANGQFSTKS---DVYSFGVLILEIIGGKKNSSFHQIDGSVSNLVTHVW---RLRNNGSLLELVDPAI 598          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: IRAK1_HUMAN (Interleukin-1 receptor-associated kinase 1 OS=Homo sapiens GN=IRAK1 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.791e-11
Identity = 52/189 (27.51%), Postives = 89/189 (47.09%), Query Frame = 2
Query:   29 KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGS-----LSELHAQGDSHQNVLTR------FLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTR 562
            K+S++ E++  SR  H  +V   G C ++     LVY ++  G L   LH  T     +   L W  RL I +G A  + +LH + +P L+H D+++S++LLD++   +LG       S       S  +++ R       L     +   +G  A     D + FG V+LE + G+  + K+  A T+
Sbjct:  253 KQSFLTEVEQLSRFRHPNIVDFAGYCAQNGFY-CLVYGFLPNGSLEDRLHCQTQ----ACPPLSWPQRLDILLGTARAIQFLHQD-SPSLIHGDIKSSNVLLDERLTPKLGDFGLARFSRFAGSSPSQSSMVARTQTVRGTLAYLPEEYIKTGRLAVDT--DTFSFGVVVLETLAGQRAV-KTHGARTK 432          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y4294_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20940 OS=Arabidopsis thaliana GN=At4g20940 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.952e-11
Identity = 54/172 (31.40%), Postives = 87/172 (50.58%), Query Frame = 2
Query:   26 KKESYMMELDLFSRVSHARLVPLLGQCL-EHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD-KFEVRLGS--LSELHAQGDSHQNVL-TRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGK 526
            +++ +  E+  FS + H  +V L G      + EKL++  Y+  G LAS L+   D        L W  RLKIA+  A GL+YLH +   P  H +++A++ILLD  +   R+    L  L  Q  + + +L    L  +  + + S     +   DVY FG +LLE++TG+
Sbjct:  791 QRKEFAKEVKKFSNIRHPNVVTLRGYYWGPTQHEKLILSDYISPGSLASFLY---DRPGRKGPPLAWTQRLKIAVDVARGLNYLHFDRAVP--HGNLKATNILLDGAELNARVADYCLHRLMTQAGTVEQILDAGILGYRAPELAASRKPLPSFKSDVYAFGVILLEILTGR 957          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CCR12_ARATH (Serine/threonine-protein kinase-like protein At1g28390 OS=Arabidopsis thaliana GN=At1g28390 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.952e-11
Identity = 52/166 (31.33%), Postives = 82/166 (49.40%), Query Frame = 2
Query:   47 ELDLFSRVSHARLVPLLGQCLEHETE-KLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGI 535
            E+++ SRV H  +V L+G C++H  + KLLV +YM  G L   LH  + L D  L S  W  R+K A+  A  +  L H     ++HRD+++ ++L+D     RL    L+ +    D               D S    +  T   DV+ FG +LLE+++G+  I
Sbjct:  102 EIEILSRVRHRWMVNLIGYCVDHRRKTKLLVVEYMPNGTLHDQLHSRSSL-DSRLSS--WNRRIKHALQIAIAVHAL-HTAETQVIHRDIKSCNVLIDGDGNARLADFGLALIGNVDDERLKYTPPAGTLGYLDPSYLAPADLTAKSDVFSFGILLLEIISGREAI 263          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CRK17_ARATH (Cysteine-rich receptor-like protein kinase 17 OS=Arabidopsis thaliana GN=CRK17 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.467e-11
Identity = 53/181 (29.28%), Postives = 88/181 (48.62%), Query Frame = 2
Query:    2 KKVSLHSFKKE-SYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG-----DSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGK 526
            K++S  S + E  +  E+ + +++ H  LV LLG  L+ E EKLLVY+++    L   L      + +    LDW  R  I  G   G+ YLH +    ++HRD++AS+ILLD     ++         G      +   V+  F +      ++   S  +   DVY FG ++LE+++GK
Sbjct:  387 KRLSKTSGQGEIEFKNEVVVVAKLQHINLVRLLGFSLQGE-EKLLVYEFVPNKSLDYFL-----FDPNKRNQLDWTVRRNIIGGITRGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGMARIFGVDQTVANTARVVGTFGYMSPEYVTHGQFSMKS---DVYSFGVLILEIISGK 558          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y1634_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g63430 OS=Arabidopsis thaliana GN=At1g63430 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.446e-11
Identity = 56/215 (26.05%), Postives = 88/215 (40.93%), Query Frame = 2
Query:   38 YMMELDLFSRVSHARLVPLLGQCLEHET-EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAY-------------DVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSL 640
            +  E+   +R++H     LLG C E     ++LV++Y   G L   LH            + W  R+KI IG A GL YLH E +PP    ++ +++I L + F  +L                    L R   +  N  S  + C               ++Y FG +LLE+V+G+    K D     EW +       L   E ++ ++DP L
Sbjct:  405 FQREVADLARLNHENTAKLLGYCKEISPFTRMLVFEYASNGTLYEHLHY------GEAALVSWARRMKIVIGIARGLKYLHMELDPPFTISELSSNAIYLTEDFTPKLVDF-----------ECWKTILARSEKNLRNISSQGSICVLPNGMESRYLDVSGNIYAFGILLLEIVSGRPPYCK-DKGFLIEWAKE-----FLEAPEAMSGLVDPEL 596          
The following BLAST results are available for this feature:
BLAST of CX287206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
CRK23_ARATH1.303e-1131.14Putative cysteine-rich receptor-like protein kinas... [more]
IRAK1_BOVIN2.223e-1127.72Interleukin-1 receptor-associated kinase 1 OS=Bos ... [more]
CRK15_ARATH2.223e-1129.35Cysteine-rich receptor-like protein kinase 15 OS=A... [more]
CRK21_ARATH2.903e-1127.73Cysteine-rich receptor-like protein kinase 21 OS=A... [more]
IRAK1_HUMAN3.791e-1127.51Interleukin-1 receptor-associated kinase 1 OS=Homo... [more]
Y4294_ARATH4.952e-1131.40Probable LRR receptor-like serine/threonine-protei... [more]
CCR12_ARATH4.952e-1131.33Serine/threonine-protein kinase-like protein At1g2... [more]
CRK17_ARATH6.467e-1129.28Cysteine-rich receptor-like protein kinase 17 OS=A... [more]
Y1634_ARATH8.446e-1126.05Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC01005H06SK Veg1 Citrus clementina cDNA clone C01005H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287206 ID=CX287206; Name=CX287206; organism=Citrus clementina; type=EST; length=700bp
AAAAAAGGTCAGTCTGCATTCGTTCAAGAAAGAATCATACATGATGGAAT
TAGATTTGTTCAGCAGAGTTTCACATGCAAGACTGGTGCCACTTTTAGGC
CAATGCTTGGAGCATGAGACAGAGAAACTTTTGGTCTACAAATATATGGT
ATGTGGAGATTTGGCTAGTTCCTTGCACAGGGTTACAGATTTGGAGGATG
ACAGTTTACAATCCCTAGATTGGATTACAAGATTGAAAATTGCAATTGGT
GCGGCGGAAGGTTTATCCTACCTACATCATGAGTGTAACCCTCCTCTTGT
TCACAGAGATGTTCAAGCCAGCAGTATCCTTCTCGATGATAAATTTGAAG
TTCGACTTGGAAGCTTGAGTGAGCTTCATGCTCAAGGAGATTCACACCAA
AATGTGCTAACGAGATTTTTGTGGAGACAAACCTCTGATGCAAGCAATTC
AGGCTCCTCCGCGGCAACTTGTGCCTATGATGTGTACTGCTTTGGAAAAG
TCCTACTTGAGCTTGTAACTGGCAAGCTTGGTATTAGCAAATCAGATGAT
GCTACTACACGAGAGTGGTTGGAACATACACTACCTCACATCACTTTACA
CGACAAGGAAATGTTGACCAAGATCATCGACCCATCTCTGATTCTAGATG
AGGATCTACTGGAAGAAGTATGGGCCATGGCAATTGTAGCCAGATCATGC
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