CX287206

Overview
NameCX287206
Unique NameCX287206
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig39 contig Ccv1_Contig39:1..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.619e-23
Identity = 84/242 (34.71%), Postives = 122/242 (50.41%), Query Frame = 2
Query:    5 KVSLHSFKK--ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL---GSLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTK-----IIDPSLILDEDLLEEVWAMAIVARSC 700
            K+  HS  +  + +  E++L  RV H  LV L+G C E +    L+Y+YM  GDL   +    +        L+W TRLKI I +A+GL YLH+ C PP+VHRDV+ ++ILL++ FE +L   G       +G++H + +         D     ++  T   DVY FG +LLE++T +  I +S +           PHI      MLTK     I+DPSL  D D    VW    +A SC
Sbjct:  606 KILSHSSSQGYKQFKAEVELLLRVHHKNLVGLVGYCDEGDN-LALIYEYMANGDLKEHMSGTRNRF-----ILNWGTRLKIVIESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHFEAKLADFGLSRSFLIEGETHVSTVVAGT-PGYLDPEYHRTNWLTEKSDVYSFGILLLEIITNRHVIDQSREK----------PHIGEWVGVMLTKGDIQSIMDPSLNEDYD-SGSVWKAVELAMSC 829          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.619e-23
Identity = 73/217 (33.64%), Postives = 106/217 (48.85%), Query Frame = 2
Query:   35 SYMMELDLFSRVSHARLVPLLGQCLEH-ETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSDASNS-GSSAATCAY--------DVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDED 655
            S+  E+    ++ H  +V L   C        LL+Y+YM  G L   LH           S+DW TR  IA+GAAEGL+YLHH+C P ++HRD+++++IL+D+ FE  +G              V+   L +  S  + S G  A   AY        D+Y FG VLLEL+TGK  +   +     +    T  HI   D  + ++I+DP L   ED
Sbjct:  866 SFRAEILTLGKIRHRNIVRLYSFCYHQGSNSNLLLYEYMSRGSLGELLH------GGKSHSMDWPTRFAIALGAAEGLAYLHHDCKPRIIHRDIKSNNILIDENFEAHVGDF--------GLAKVIDMPLSKSVSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELLTGKAPVQPLEQG--GDLATWTRNHI--RDHSLTSEILDPYLTKVED 1064          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.619e-23
Identity = 71/209 (33.97%), Postives = 112/209 (53.59%), Query Frame = 2
Query:   38 YMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTR-FLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLG-----ISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSL 640
            +  E+++ S   H  L+ L G C+   TE+LLVY YM  G +AS L         S   L W  R +IA+G+A GLSYLH  C+P ++HRDV+A++ILLD++FE  +G   L+ L    D+H     R  +     +  ++G S+     DV+ +G +LLEL+TG+       ++  DD    +W++  L       ++ L  ++DP L
Sbjct:  347 FQTEVEMISMAVHRNLLRLRGFCMT-PTERLLVYPYMANGSVASCLRE----RPPSQLPLAWSIRQQIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLARLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT--DVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLL------KEKKLEMLVDPDL 542          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: HSL2_ARATH (LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana GN=HSL2 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.619e-23
Identity = 84/254 (33.07%), Postives = 121/254 (47.64%), Query Frame = 2
Query:   38 YMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSD----------ASNSGSSAATCAY--------DVYCFGKVLLELVTGKLGISKS---DDATTREWLEHTL--PHITLHDKEM----------LTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            +  E++   RV H  +V LL  C   E  + LVY++M  G L   LH  ++ E  ++  LDW TR  IA+GAA+GLSYLHH+  PP+VHRDV++++ILLD + + R+                L + L R+ +D          A + G  A    Y        DVY FG VLLEL+TGK     S   +    +  +E  L  P  +  D  M          L+K++DP + L     EE+  +  VA  C
Sbjct:  730 FRSEVETLGRVRHGNIVKLL-MCCNGEEFRFLVYEFMENGSLGDVLH--SEKEHRAVSPLDWTTRFSIAVGAAQGLSYLHHDSVPPIVHRDVKSNNILLDHEMKPRVADFG------------LAKPLKREDNDGVSDVSMSCVAGSYGYIAPEYGYTSKVNEKSDVYSFGVVLLELITGKRPNDSSFGENKDIVKFAMEAALCYPSPSAEDGAMNQDSLGNYRDLSKLVDPKMKLSTREYEEIEKVLDVALLC 968          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: ACCR2_ARATH (Serine/threonine-protein kinase-like protein CCR2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.256e-22
Identity = 76/216 (35.19%), Postives = 107/216 (49.54%), Query Frame = 2
Query:   14 LHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISK-SDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDL 658
            +HS     +  EL++  ++ H  +V LLG C E   E+LLVY+YM  G L   LH         L  LDW  RLKI + AA GL YLH+E +PP++HRDV+ S+ILLD +   R+     + +                  D+SNS         DVY FG VLLE+++G+  I + SD A   EW       + L  K     IID ++ L  ++
Sbjct:  555 IHS-NNRGFESELEILCKIRHNNIVNLLGYCSEMG-ERLLVYEYMPHGTLHDHLH-------GDLSQLDWSMRLKIMLQAARGLDYLHNEVDPPIIHRDVKTSNILLDGEMCARIADFGLVSS---------------NERDSSNSDREG-----DVYDFGIVLLEILSGRKAIDRESDPAGIAEWA------VPLIRKGKAAAIIDRNICLPRNV 735          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.641e-22
Identity = 70/209 (33.49%), Postives = 112/209 (53.59%), Query Frame = 2
Query:   38 YMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTR-FLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLG-----ISKSDDATTREWLEHTLPHITLH---DKEMLTKIID 631
            +  E+++ S   H  L+ L G C+   TE+LLVY YM  G +AS L        +   +LDW  R  IA+G+A GL+YLH  C+  ++HRDV+A++ILLD++FE  +G   L++L    DSH     R  +     +  ++G S+     DV+ +G +LLEL+TG+       ++  DD    +W++  L    L    D E+  K ++
Sbjct:  336 FQTEVEMISMAVHRNLLRLRGFCMT-PTERLLVYPYMANGSVASCLRE----RPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHRDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKT--DVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVLKEKKLESLVDAELEGKYVE 537          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.799e-22
Identity = 70/204 (34.31%), Postives = 109/204 (53.43%), Query Frame = 2
Query:   38 YMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASN-SGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSL 640
            +++E+   S   H  LV L+G C E + ++LLVY+YM  G L   LH +        + LDW TR+KIA GAA GL YLH    PP+++RD++ S+ILL + ++ +L    L+++   GD   +V TR +      A + + +   T   D+Y FG VLLEL+TG+  I  +     +  +    P     D+    K++DP L
Sbjct:  145 FVVEVLTLSLADHPNLVKLIGFCAEGD-QRLLVYEYMPQGSLEDHLHVLPS----GKKPLDWNTRMKIAAGAARGLEYLHDRMTPPVIYRDLKCSNILLGEDYQPKLSDFGLAKVGPSGDK-THVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNTKTRKDQNLVGWARP--LFKDRRNFPKMVDPLL 340          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.799e-22
Identity = 62/163 (38.04%), Postives = 94/163 (57.67%), Query Frame = 2
Query:   47 ELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKL 529
            EL++   + H  LV L G C    T KLL+Y Y+  G L  +LH+  +        LDW +R+ I IGAA+GL+YLHH+C+P ++HRD+++S+ILLD   E R+    L++L    +SH   +    +   +      S  AT   DVY FG ++LE+++GKL
Sbjct:  348 ELEILGSIKHRYLVNLRGYC-NSPTSKLLLYDYLPGGSLDEALHKRGE-------QLDWDSRVNIIIGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLA-PEYMQSGRATEKTDVYSFGVLVLEVLSGKL 501          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.655e-22
Identity = 62/162 (38.27%), Postives = 93/162 (57.41%), Query Frame = 2
Query:   47 ELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGK 526
            EL++   + H  LV L G C    T KLL+Y Y+  G L  +LH       +  + LDW +R+ I IGAA+GLSYLHH+C+P ++HRD+++S+ILLD   E R+    L++L    +SH   +    +   +      S  AT   DVY FG ++LE+++GK
Sbjct:  350 ELEILGSIKHRYLVNLRGYC-NSPTSKLLLYDYLPGGSLDEALH-------ERGEQLDWDSRVNIIIGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLA-PEYMQSGRATEKTDVYSFGVLVLEVLSGK 502          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: ACCR3_ARATH (Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana GN=CCR3 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.655e-22
Identity = 74/225 (32.89%), Postives = 112/225 (49.78%), Query Frame = 2
Query:   26 KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAY---------------DVYCFGKVLLELVTGKLGISKSDDATTRE-------WLEHTLPHITLHDKEMLTKIIDP 634
            K+ ++  E+   SR+ H  LV L+G C E E EKLLVY YM  G L   LH   ++E  S     W  R+KIA+ AA G+ YLH+   PP++HRD+++S+ILLD  +  R+          D   +++   L +  +       +A T  Y               DVY  G VLLEL+TGK  I +++     E        +++++P IT  +   L+ I+DP
Sbjct:  538 KETAFDSEIAFLSRLHHKHLVRLVGYCEERE-EKLLVYDYMKNGALYDHLHDKNNVEKHSSLINSWKMRIKIALDAARGIEYLHNYAVPPIIHRDIKSSNILLDSNWVARV---------SDFGLSLMGPVLGKDHNPYQRPTKAAGTVGYIDPEYYSLNVLTDKSDVYGLGVVLLELLTGKRAIFRNNGDVEEEEGCVPVHLVDYSVPAITADE---LSTILDP 749          
The following BLAST results are available for this feature:
BLAST of CX287206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
Y5182_ARATH9.619e-2334.71Probable LRR receptor-like serine/threonine-protei... [more]
Y2317_ARATH9.619e-2333.64Probable leucine-rich repeat receptor-like protein... [more]
SERK2_ARATH9.619e-2333.97Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
HSL2_ARATH9.619e-2333.07LRR receptor-like serine/threonine-protein kinase ... [more]
ACCR2_ARATH1.256e-2235.19Serine/threonine-protein kinase-like protein CCR2 ... [more]
SERK4_ARATH1.641e-2233.49Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
RLCK7_ARATH2.799e-2234.31Probable serine/threonine-protein kinase RLCKVII O... [more]
FEI2_ARATH2.799e-2238.04LRR receptor-like serine/threonine-protein kinase ... [more]
FEI1_ARATH3.655e-2238.27LRR receptor-like serine/threonine-protein kinase ... [more]
ACCR3_ARATH3.655e-2232.89Putative serine/threonine-protein kinase-like prot... [more]

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Properties
Property NameValue
Genbank descriptionC01005H06SK Veg1 Citrus clementina cDNA clone C01005H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287206 ID=CX287206; Name=CX287206; organism=Citrus clementina; type=EST; length=700bp
AAAAAAGGTCAGTCTGCATTCGTTCAAGAAAGAATCATACATGATGGAAT
TAGATTTGTTCAGCAGAGTTTCACATGCAAGACTGGTGCCACTTTTAGGC
CAATGCTTGGAGCATGAGACAGAGAAACTTTTGGTCTACAAATATATGGT
ATGTGGAGATTTGGCTAGTTCCTTGCACAGGGTTACAGATTTGGAGGATG
ACAGTTTACAATCCCTAGATTGGATTACAAGATTGAAAATTGCAATTGGT
GCGGCGGAAGGTTTATCCTACCTACATCATGAGTGTAACCCTCCTCTTGT
TCACAGAGATGTTCAAGCCAGCAGTATCCTTCTCGATGATAAATTTGAAG
TTCGACTTGGAAGCTTGAGTGAGCTTCATGCTCAAGGAGATTCACACCAA
AATGTGCTAACGAGATTTTTGTGGAGACAAACCTCTGATGCAAGCAATTC
AGGCTCCTCCGCGGCAACTTGTGCCTATGATGTGTACTGCTTTGGAAAAG
TCCTACTTGAGCTTGTAACTGGCAAGCTTGGTATTAGCAAATCAGATGAT
GCTACTACACGAGAGTGGTTGGAACATACACTACCTCACATCACTTTACA
CGACAAGGAAATGTTGACCAAGATCATCGACCCATCTCTGATTCTAGATG
AGGATCTACTGGAAGAAGTATGGGCCATGGCAATTGTAGCCAGATCATGC
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