CX287206

Overview
NameCX287206
Unique NameCX287206
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig39 contig Ccv1_Contig39:1..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.774e-22
Identity = 80/231 (34.63%), Postives = 117/231 (50.65%), Query Frame = 2
Query:   32 ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL---GSLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTK-----IIDPSLILDEDLLEEVWAMAIVARSC 700
            + +  E++L  RV H  LV L+G C E E    L+Y+YM  GDL   +   +     S+  L+W TRLKI + +A+GL YLH+ C PP+VHRDV+ ++ILL++    +L   G       +G++H + +         D     ++      DVY FG VLLE++T +L I++S +           PHI      MLTK     I+DP L  D D    VW    +A SC
Sbjct:  631 KEFKAEVELLLRVHHKNLVGLVGYCDEGEN-LALIYEYMANGDLREHM---SGKRGGSI--LNWETRLKIVVESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHLHAKLADFGLSRSFPIEGETHVSTVVAGT-PGYLDPEYYRTNWLNEKSDVYSFGIVLLEIITNQLVINQSREK----------PHIAEWVGLMLTKGDIQNIMDPKLYGDYD-SGSVWRAVELAMSC 843          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: GSO2_ARATH (LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 4.774e-22
Identity = 74/210 (35.24%), Postives = 105/210 (50.00%), Query Frame = 2
Query:   32 ESYMMELDLFSRVSHARLVPLLGQCLEH-ETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL---SELHAQGDSHQNVLTRFLWRQTSDASN-SGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTR--EWLEHTLPHITLHDKEMLTKIIDPSL 640
            +S+  E+     + H  LV L+G C    +   LL+Y+YM  G +   LH   + +   +  L W TRLKIA+G A+G+ YLH++C PP+VHRD+++S++LLD   E  LG       L    D++    T F       A   + S  AT   DVY  G VL+E+VTGK+      D  T    W+E  L   T    E   K+ID  L
Sbjct:  988 KSFNREVKTLGTIRHRHLVKLMGYCSSKADGLNLLIYEYMANGSVWDWLHANENTKKKEV--LGWETRLKIALGLAQGVEYLHYDCVPPIVHRDIKSSNVLLDSNIEAHLGDFGLAKILTGNYDTNTESNTMFAGSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMPTEAMFDEETDMVRWVETVLD--TPPGSEAREKLIDSEL 1193          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.774e-22
Identity = 75/226 (33.19%), Postives = 110/226 (48.67%), Query Frame = 2
Query:    2 KKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSD--DATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEE 667
            K + L       +M E++   ++ H  LVPLLG C   E E+LLVY++M  G L   LH     E   +  L W  R KIA GAA+GL +LHH C P ++HRD+++S++LLD   E R+    ++ L +  D+H +V T              S   T   DVY  G V+LE+++GK    K +  D     W             +M  +      ++DEDLL+E
Sbjct:  867 KLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKIGE-ERLLVYEFMQYGSLEEVLHGPRTGEKRRI--LGWEERKKIAKGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDQDMEARVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSIGVVMLEILSGKRPTDKEEFGDTNLVGW------------SKMKAREGKHMEVIDEDLLKE 1077          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 104.375 bits (259), Expect = 6.235e-22
Identity = 72/225 (32.00%), Postives = 112/225 (49.78%), Query Frame = 2
Query:   29 KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSDASNSG-SSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            +  +  E++  SR  H  LV L G C  ++ ++LL+Y YM  G L   LH      +D    L W TRL+IA GAA+GL YLH  C+P ++HRD+++S+ILLD+ F   L              +V T  +          G +S AT   DVY FG VLLEL+T K  +        R+ +      + +  +   +++ DP LI  ++  +E++ +  +A  C
Sbjct:  772 EREFEAEVETLSRAQHPNLVLLRGFCF-YKNDRLLIYSYMENGSLDYWLHE----RNDGPALLKWKTRLRIAQGAAKGLLYLHEGCDPHILHRDIKSSNILLDENFNSHLADFGLARLMSPYETHVSTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTDKRPVDMCKPKGCRDLISWV---VKMKHESRASEVFDP-LIYSKENDKEMFRVLEIACLC 987          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.143e-22
Identity = 81/228 (35.53%), Postives = 119/228 (52.19%), Query Frame = 2
Query:   35 SYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSDA----SNSGSSAATCAYDVYCFGKVLLELVTGKLGI--SKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            ++  E+++ S   H  L+ L+G C   +TE+LLVY +M    LA   HR+ +++      LDW TR +IA+GAA G  YLH  CNP ++HRDV+A+++LLD+ FE  +G             NV T+        A    S   SS  T   DV+ +G +LLELVTG+  I  S+ ++      L+H      L  ++ L  I+D +L   E + EEV  M  VA  C
Sbjct:  331 AFQREVEMISVAVHRNLLRLIGFCTT-QTERLLVYPFMQNLSLA---HRLREIKAGD-PVLDWETRKRIALGAARGFEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRRTNVTTQVRGTMGHIAPEYLSTGKSSERT---DVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVK---KLEREKRLGAIVDKNLD-GEYIKEEVEMMIQVALLC 546          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.143e-22
Identity = 77/211 (36.49%), Postives = 106/211 (50.24%), Query Frame = 2
Query:   32 ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGD-SHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTK-----IIDPSL 640
            + +  E++L  RV H  LV L+G C E +    L+Y+YMV GDL                 + W+ RL IA+ AA GL YLH  C P +VHRDV++S+ILLDD+ + +L    LS     GD SH + L    +    D     ++  +   DVY FG VLLE++T K  I  + D          +PHI    K MLT+     I+DP L
Sbjct:  609 KEFKTEVELLLRVYHTNLVSLVGYCDEKD-HLALIYQYMVNGDLKKHF--------SGSSIISWVDRLNIAVDAASGLEYLHIGCKPLIVHRDVKSSNILLDDQLQAKLADFGLSRSFPIGDESHVSTLVAGTFGYL-DHEYYQTNRLSEKSDVYSFGVVLLEIITNKPVIDHNRD----------MPHIAEWVKLMLTRGDISNIMDPKL 799          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: RCH1_ARATH (LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.143e-22
Identity = 66/176 (37.50%), Postives = 94/176 (53.41%), Query Frame = 2
Query:   29 KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAY--------DVYCFGKVLLELVTGK 526
            ++S+  E+     + H  +V  LG C    T +LL+Y YM  G L S LH     E   + SL W  R KI +GAA+GL+YLHH+C PP+VHRD++A++IL+   FE  +G   L++L   GD        F     + A + G  A    Y        DVY +G V+LE++TGK
Sbjct:  833 RDSFSAEVKTLGSIRHKNIVRFLGCCWNKNT-RLLMYDYMSNGSLGSLLH-----ERSGVCSLGWEVRYKIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPDFEPYIGDFGLAKLVDDGD--------FARSSNTIAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGK 994          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: ERECT_ARATH (LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.143e-22
Identity = 77/223 (34.53%), Postives = 118/223 (52.91%), Query Frame = 2
Query:   32 ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWR-QTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDP---SLILDEDLLEEVWAMAIV 688
            + +  EL++ S + H  LV L    L H    LL Y Y+  G L   LH  T       ++LDW TRLKIA GAA+GL+YLHH+C+P ++HRDV++S+ILLD   E RL       +   S  +  T  +      D   + +S  T   DVY +G VLLEL+T +  +   DD +    L H +   T +++ M  ++ DP   S   D  ++++V+ +A++
Sbjct:  687 KQFETELEMLSSIKHRNLVSLQAYSLSH-LGSLLFYDYLENGSLWDLLHGPT-----KKKTLDWDTRLKIAYGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDLEARLTDFGIAKSLCVSKSHTSTYVMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTRRKAV---DDESN---LHHLIMSKTGNNEVM--EMADPDITSTCKDLGVVKKVFQLALL 895          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.064e-21
Identity = 76/226 (33.63%), Postives = 118/226 (52.21%), Query Frame = 2
Query:   26 KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWR-QTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            K E ++ E+ + ++++H  +V LLG CLE E   +LVY+++  GDL     R+ D  DD + +  W  RL IAI  A  LSYLH   + P+ HRD++ ++ILLD+K++V++       +      ++ T+        D     SS  T   DVY FG VL+EL+TGK   S+      R +  H +  +    KE     I    I DE  L++V A+A +A+ C
Sbjct:  461 KVEEFINEVVVLAQINHRNIVKLLGCCLETEVP-VLVYEFVPNGDLCK---RLRDECDDYIMT--WEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDEKYQVKVSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEYFQSSKFTDKSDVYSFGVVLVELITGKNPSSRVQSEENRGFAAHFVAAV----KENRFLDIVDERIKDECNLDQVMAVAKLAKRC 676          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.064e-21
Identity = 69/209 (33.01%), Postives = 111/209 (53.11%), Query Frame = 2
Query:   38 YMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTR-FLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLG-----ISKSDDATTREWLEHTLPHITLH---DKEMLTKIID 631
            +  E+++ S   H  L+ L G C+   TE+LLVY YM  G +AS L        +   +LDW  R  IA+G+A GL+YLH  C+  ++H DV+A++ILLD++FE  +G   L++L    DSH     R  +     +  ++G S+     DV+ +G +LLEL+TG+       ++  DD    +W++  L    L    D E+  K ++
Sbjct:  317 FQTEVEMISMAVHRNLLRLRGFCMT-PTERLLVYPYMANGSVASCLRE----RPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHLDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKT--DVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVLKEKKLESLVDAELEGKYVE 518          
The following BLAST results are available for this feature:
BLAST of CX287206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
RLK6_ARATH4.774e-2234.63Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
GSO2_ARATH4.774e-2235.24LRR receptor-like serine/threonine-protein kinase ... [more]
BRL2_ARATH4.774e-2233.19Serine/threonine-protein kinase BRI1-like 2 OS=Ara... [more]
PSKR1_ARATH6.235e-2232.00Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
Y5129_ARATH8.143e-2235.53Probable LRR receptor-like serine/threonine-protei... [more]
Y1756_ARATH8.143e-2236.49Probable LRR receptor-like serine/threonine-protei... [more]
RCH1_ARATH8.143e-2237.50LRR receptor-like serine/threonine-protein kinase ... [more]
ERECT_ARATH8.143e-2234.53LRR receptor-like serine/threonine-protein kinase ... [more]
WAKLD_ARATH1.064e-2133.63Wall-associated receptor kinase-like 4 OS=Arabidop... [more]
SERK5_ARATH1.064e-2133.01Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionC01005H06SK Veg1 Citrus clementina cDNA clone C01005H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287206 ID=CX287206; Name=CX287206; organism=Citrus clementina; type=EST; length=700bp
AAAAAAGGTCAGTCTGCATTCGTTCAAGAAAGAATCATACATGATGGAAT
TAGATTTGTTCAGCAGAGTTTCACATGCAAGACTGGTGCCACTTTTAGGC
CAATGCTTGGAGCATGAGACAGAGAAACTTTTGGTCTACAAATATATGGT
ATGTGGAGATTTGGCTAGTTCCTTGCACAGGGTTACAGATTTGGAGGATG
ACAGTTTACAATCCCTAGATTGGATTACAAGATTGAAAATTGCAATTGGT
GCGGCGGAAGGTTTATCCTACCTACATCATGAGTGTAACCCTCCTCTTGT
TCACAGAGATGTTCAAGCCAGCAGTATCCTTCTCGATGATAAATTTGAAG
TTCGACTTGGAAGCTTGAGTGAGCTTCATGCTCAAGGAGATTCACACCAA
AATGTGCTAACGAGATTTTTGTGGAGACAAACCTCTGATGCAAGCAATTC
AGGCTCCTCCGCGGCAACTTGTGCCTATGATGTGTACTGCTTTGGAAAAG
TCCTACTTGAGCTTGTAACTGGCAAGCTTGGTATTAGCAAATCAGATGAT
GCTACTACACGAGAGTGGTTGGAACATACACTACCTCACATCACTTTACA
CGACAAGGAAATGTTGACCAAGATCATCGACCCATCTCTGATTCTAGATG
AGGATCTACTGGAAGAAGTATGGGCCATGGCAATTGTAGCCAGATCATGC
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