CX287206

Overview
NameCX287206
Unique NameCX287206
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig39 contig Ccv1_Contig39:1..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: WAKLE_ARATH (Wall-associated receptor kinase-like 5 OS=Arabidopsis thaliana GN=WAKL5 PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.389e-21
Identity = 74/226 (32.74%), Postives = 118/226 (52.21%), Query Frame = 2
Query:   26 KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWR-QTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            K E ++ E+ L S+++H  +V L+G CLE E   +LVY+Y+  GD+   LH   D  DD   ++ W  RL+IAI  A  L+Y+H   + P+ HRD++ ++ILLD+K+  ++       +      ++ T         D     SS  T   DVY FG VL+EL+TG+  +S+      R    H L  +    +  +  IID   I +E  L+++ A+A +AR C
Sbjct:  469 KLEKFINEIILLSQINHRNIVKLIGCCLETEVP-ILVYEYIPNGDMFKRLH---DESDD--YAMTWEVRLRIAIEIAGALTYMHSAASFPIYHRDIKTTNILLDEKYGAKVSDFGTSRSVTIDQTHLTTMVAGTFGYMDPEYFLSSQYTDKSDVYSFGVVLVELITGEKPLSRIRSEEGRGLATHFLEAM---KENRVIDIID-IRIKEESKLDQLMAVAKLARKC 684          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.389e-21
Identity = 75/228 (32.89%), Postives = 122/228 (53.51%), Query Frame = 2
Query:   32 ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL---GSLSELHAQGDSHQN-VLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISK-SDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            + +  E+DL  RV H  LV L+G C E +    LVY+++  GDL   L   +    +S+  ++W  RL+IA+ AA GL YLH  C PP+VHRDV+ ++ILLD+ F+ +L   G       +G+S ++  +   L     +  +SG        DVY FG VLLE++T +  I++ S D+   +W+   +      ++  + +I+DP+L  D + +   W    +A SC
Sbjct:  603 KEFKAEVDLLLRVHHTNLVSLVGYCCEGDY-LALVYEFLPNGDLKQHL---SGKGGNSI--INWSIRLRIALEAALGLEYLHIGCTPPMVHRDVKTANILLDENFKAKLADFGLSRSFQGEGESQESTTIAGTLGYLDPECYHSGRLGEKS--DVYSFGIVLLEMITNQPVINQTSGDSHITQWVGFQM------NRGDILEIMDPNLRKDYN-INSAWRALELAMSC 815          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: ERL2_ARATH (LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.389e-21
Identity = 74/211 (35.07%), Postives = 102/211 (48.34%), Query Frame = 2
Query:   47 ELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWR-QTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGI-----------SKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLI 643
            EL+    + H  +V L G  L      LL Y YM  G L   LH            LDW TRLKIA+GAA+GL+YLHH+C P ++HRD+++S+ILLD  FE RL       +   +     T  L      D   + +S      D+Y FG VLLEL+TGK  +           SK+DD T  E ++  +  +T  D   + K    +L+
Sbjct:  695 ELETIGSIRHRNIVSLHGYALS-PFGNLLFYDYMENGSLWDLLHG-----PGKKVKLDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSNILLDGNFEARLSDFGIAKSIPATKTYASTYVLGTIGYIDPEYARTSRLNEKSDIYSFGIVLLELLTGKKAVDNEANLHQMILSKADDNTVMEAVDAEV-SVTCMDSGHIKKTFQLALL 898          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.389e-21
Identity = 83/240 (34.58%), Postives = 122/240 (50.83%), Query Frame = 2
Query:    2 KKVSLHSFKKES--YMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQS-LDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQT---SDASNSGSSAATCAYDVYCFGKVLLELVTGKLGIS-KSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            + +     KK S  +  ELDL SR++HA L+ LLG C E  +E+LLVY++M  G L   LH     +D +L+  L+W  R+ IA+ AA G+ YLH    PP++HRD+++S+IL+D+    R+     L   G +        L   T    D         T   DVY FG VLLE+++G+  I  + ++    EW    +P I   D   +  I+DP L    D LE +  +A VA  C
Sbjct:  534 RAIKASDVKKSSKEFHNELDLLSRLNHAHLLNLLGYC-EDGSERLLVYEFMAHGSLYQHLHG----KDPNLKKRLNWARRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEDHNARVADFG-LSILGPADSGTPLSELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVVLLEILSGRKAIDMQFEEGNIVEW---AVPLIKAGD---IFAILDPVLSPPSD-LEALKKIASVACKC 760          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.814e-21
Identity = 77/226 (34.07%), Postives = 117/226 (51.77%), Query Frame = 2
Query:   26 KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWR-QTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            K E ++ E+ + S+++H  +V LLG CLE +   +LVY+++  G+L   LH   D  D+++ +  W  RL+IAI  A  LSYLH   + P+ HRDV++++I+LD+K+  ++            H ++ T         D     SS  T   DVY FG VL+EL+TG+  IS       R    +    I    +  L  IID + I D  +L +V A A VAR C
Sbjct:  484 KLEEFINEVVILSQINHRNIVKLLGCCLETKVP-VLVYEFIPNGNLFEHLH---DEFDENIMAT-WNIRLRIAIDIAGALSYLHSSASSPIYHRDVKSTNIMLDEKYRAKVSDFGTSRTVTVDHTHLTTVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLVELITGEKSISFLRSQENRTLATY---FILAMKENKLFDIID-ARIRDGCMLSQVTATAKVARKC 700          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: WAKLC_ARATH (Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 1.814e-21
Identity = 77/227 (33.92%), Postives = 118/227 (51.98%), Query Frame = 2
Query:   26 KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL--SELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            K E ++ E+ L S+++H  +V LLG CLE E   +LVY+Y+  GDL   LH   D  DD + +  W  RL+IA+  A  LSY+H   + P+ HRD++ ++ILLD+K+  ++     S   A   +H   L    +    D     SS  T   DVY FG VL+EL+TG+  +S+     + E +      +    +     IID   I  +D  ++V A+A +AR C
Sbjct:  465 KMEEFINEIVLLSQINHRNIVKLLGCCLETEVP-ILVYEYIPNGDLFKRLH---DEYDDYMMT--WEVRLRIAVEIAGALSYMHSAASFPIFHRDIKTTNILLDEKYRAKISDFGTSRSVATDQTHLTTLVAGTFGY-MDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPMSR---VRSEEGIGLATYFLEAMKENRAVDIID---IRIKDESKQVMAVAKLARRC 678          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.369e-21
Identity = 73/226 (32.30%), Postives = 122/226 (53.98%), Query Frame = 2
Query:   32 ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASN-SGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            + ++ E++   + SH  LV L+G CLE E  +LLVY++M  G L + L R         Q L W  RLK+A+GAA+GL++LH+     +++RD + S+ILLD ++  +L    L++    GD   +V TR +      A     +   T   DVY +G VLLE+++G+  + K+     ++ +E   P   L +K  L ++ID + + D+  +EE   +A +A  C
Sbjct:  118 QEWLAEVNYLGQFSHPNLVKLIGYCLEDE-HRLLVYEFMPRGSLENHLFR----RGSYFQPLSWTLRLKVALGAAKGLAFLHN-AETSVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPTGDK-SHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPPGEQKLVEWARP--LLANKRKLFRVID-NRLQDQYSMEEACKVATLALRC 333          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.094e-21
Identity = 78/232 (33.62%), Postives = 119/232 (51.29%), Query Frame = 2
Query:   32 ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL---GSLSELHAQGDSHQNVLTRFLWRQ-TSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLT-----KIIDPSLILDEDLLEEVWAMAIVARSC 700
            + +  E++L  RV H  LV L+G C + +    L+Y+YM  GDL  ++         S+  L W TR++IA+ AA+GL YLH+ C PP+VHRDV+ ++ILL+++ + +L   G        G+SH  V+T         D     ++  +   DVY FG VLLE+VT +  ++K+ +           PHI      MLT      I+DP L  D D    VW +  +A +C
Sbjct:  608 KEFKAEVELLLRVHHRHLVGLVGYCDDGDN-LALIYEYMEKGDLRENMSG-----KHSVNVLSWETRMQIAVEAAQGLEYLHNGCRPPMVHRDVKPTNILLNERSQAKLADFGLSRSFPVDGESH--VMTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVMNKNRER----------PHINEWVMFMLTNGDIKSIVDPKLNEDYD-TNGVWKVVELALAC 820          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3)

HSP 1 Score: 102.064 bits (253), Expect = 3.094e-21
Identity = 71/213 (33.33%), Postives = 107/213 (50.23%), Query Frame = 2
Query:   38 YMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAY--------DVYCFGKVLLELVTGKLGISK-SDDATTREWLEHTLPHITL-HDKEMLTKIIDPSL 640
            +  E+    R+ H  +V LLG     +T  LL+Y+YM  G L   LH            L W TR ++A+ AA+GL YLHH+C+P ++HRDV++++ILLD  FE  +    L++    G + + +        +S A + G  A   AY        DVY FG VLLEL+ GK  + +  +      W+ +T   IT   D  ++  I+DP L
Sbjct:  734 FTAEIQTLGRIRHRHIVRLLGYVANKDTN-LLLYEYMPNGSLGELLH------GSKGGHLQWETRHRVAVEAAKGLCYLHHDCSPLILHRDVKSNNILLDSDFEAHVADFGLAKFLVDGAASECM--------SSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGEGVDIVRWVRNTEEEITQPSDAAIVVAIVDPRL 931          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.041e-21
Identity = 61/170 (35.88%), Postives = 95/170 (55.88%), Query Frame = 2
Query:   38 YMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTS--DASNSGSSAATCAYDVYCFGKVLLELVTGKLGISK 541
            +  E++L SRV H  +V LLG C + + E++LVY+Y+  G L   L     ++      LDW  RLKIA+G+ +GL+YLH   +PP++HRDV++++ILLD+    ++         GD  +  +T  +       D     ++  T   DVY FG V+LEL+TGK  I +
Sbjct:  675 FKTEIELLSRVHHKNVVKLLGFCFDQK-EQMLVYEYIPNGSLRDGLSGKNGVK------LDWTRRLKIALGSGKGLAYLHELADPPIIHRDVKSNNILLDEHLTAKVADFGLSKLVGDPEKAHVTTQVKGTMGYLDPEYYMTNQLTEKSDVYGFGVVMLELLTGKSPIDR 837          
The following BLAST results are available for this feature:
BLAST of CX287206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
WAKLE_ARATH1.389e-2132.74Wall-associated receptor kinase-like 5 OS=Arabidop... [more]
RLK7_ARATH1.389e-2132.89Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
ERL2_ARATH1.389e-2135.07LRR receptor-like serine/threonine-protein kinase ... [more]
CRI4_MAIZE1.389e-2134.58Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
WAKLH_ARATH1.814e-2134.07Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
WAKLC_ARATH1.814e-2133.92Wall-associated receptor kinase-like 3 OS=Arabidop... [more]
APK1B_ARATH2.369e-2132.30Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
Y5189_ARATH3.094e-2133.62Probable LRR receptor-like protein kinase At1g5189... [more]
CLV1_ARATH3.094e-2133.33Receptor protein kinase CLAVATA1 OS=Arabidopsis th... [more]
Y5977_ARATH4.041e-2135.88Probable leucine-rich repeat receptor-like protein... [more]

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Properties
Property NameValue
Genbank descriptionC01005H06SK Veg1 Citrus clementina cDNA clone C01005H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287206 ID=CX287206; Name=CX287206; organism=Citrus clementina; type=EST; length=700bp
AAAAAAGGTCAGTCTGCATTCGTTCAAGAAAGAATCATACATGATGGAAT
TAGATTTGTTCAGCAGAGTTTCACATGCAAGACTGGTGCCACTTTTAGGC
CAATGCTTGGAGCATGAGACAGAGAAACTTTTGGTCTACAAATATATGGT
ATGTGGAGATTTGGCTAGTTCCTTGCACAGGGTTACAGATTTGGAGGATG
ACAGTTTACAATCCCTAGATTGGATTACAAGATTGAAAATTGCAATTGGT
GCGGCGGAAGGTTTATCCTACCTACATCATGAGTGTAACCCTCCTCTTGT
TCACAGAGATGTTCAAGCCAGCAGTATCCTTCTCGATGATAAATTTGAAG
TTCGACTTGGAAGCTTGAGTGAGCTTCATGCTCAAGGAGATTCACACCAA
AATGTGCTAACGAGATTTTTGTGGAGACAAACCTCTGATGCAAGCAATTC
AGGCTCCTCCGCGGCAACTTGTGCCTATGATGTGTACTGCTTTGGAAAAG
TCCTACTTGAGCTTGTAACTGGCAAGCTTGGTATTAGCAAATCAGATGAT
GCTACTACACGAGAGTGGTTGGAACATACACTACCTCACATCACTTTACA
CGACAAGGAAATGTTGACCAAGATCATCGACCCATCTCTGATTCTAGATG
AGGATCTACTGGAAGAAGTATGGGCCATGGCAATTGTAGCCAGATCATGC
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