CX287206

Overview
NameCX287206
Unique NameCX287206
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig39 contig Ccv1_Contig39:1..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.041e-21
Identity = 78/231 (33.77%), Postives = 111/231 (48.05%), Query Frame = 2
Query:   32 ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL---GSLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTK-----IIDPSLILDEDLLEEVWAMAIVARSC 700
            + +  E++L  RV H  LV L+G C + E+   L+Y+Y   GDL   L       +     L W +RLKI +  A+GL YLH  C PP+VHRDV+ ++ILLD+ F+ +L   G        G++H +           D     ++      DVY FG VLLE++T +  I +     TRE      PHI      MLTK     ++DP L  D +    VW    +A SC
Sbjct:  612 KEFKAEVELLLRVHHVNLVSLVGYC-DEESNLALLYEYAPNGDLKQHLSG-----ERGGSPLKWSSRLKIVVETAQGLEYLHTGCKPPMVHRDVKTTNILLDEHFQAKLADFGLSRSFPVGGETHVSTAVAGT-PGYLDPEYYRTNRLNEKSDVYSFGIVLLEIITSRPVIQQ-----TRE-----KPHIAAWVGYMLTKGDIENVVDPRLNRDYE-PTSVWKALEIAMSC 824          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 4.041e-21
Identity = 70/183 (38.25%), Postives = 100/183 (54.64%), Query Frame = 2
Query:   29 KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSEL----HAQGDSHQNVLT------------RFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTG 523
            ++ ++ E++L SR+ H  LV LLG C + E E++LVY+YM  G L  ++           + LD+  RL+IA+G+A+G+ YLH E NPP+ HRD++AS+ILLD +F  ++    LS L      +G S Q+V T             FL  Q +D S           DVY  G VLLEL TG
Sbjct:  663 EKEFLTEIELLSRLHHRNLVSLLGFC-DEEGEQMLVYEYMENGTLRDNISVKLK------EPLDFAMRLRIALGSAKGILYLHTEANPPIFHRDIKASNILLDSRFTAKVADFGLSRLAPVPDMEGISPQHVSTVVKGTPGYLDPEYFLTHQLTDKS-----------DVYSLGVVLLELFTG 827          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.041e-21
Identity = 79/221 (35.75%), Postives = 118/221 (53.39%), Query Frame = 2
Query:    2 KKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTS----DASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHIT-LHDKEMLTKIIDPSL 640
            K+  L++ K  +  + E+ +  +V+H  LV LLG C++ E   LL+Y+++  G L   LH  +D    + + L W  RL+IA   AEGL+YLH    PP+ HRDV++S+ILLD+K   ++    LS L    ++  N    F   Q +    D     +   T   DVY FG VLLE+VT K    K+ D T  E   + + +I  + D+E LT+ IDP L
Sbjct:  391 KRAKLNNTKGTDQILNEVRILCQVNHRSLVRLLGCCVDLELP-LLIYEFIPNGTLFEHLHGSSDR---TWKPLTWRRRLQIAYQTAEGLAYLHSAAQPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVDLTETANNESHIFTGAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLLEMVTSK----KAIDFTREEEDVNLVMYINKMMDQERLTECIDPLL 603          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.041e-21
Identity = 73/226 (32.30%), Postives = 122/226 (53.98%), Query Frame = 2
Query:   32 ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASN-SGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            + ++ E++   + SH  LV L+G CLE E  +LLVY++M  G L + L R         Q L W  RLK+A+GAA+GL++L H     +++RD + S+ILLD ++  +L    L++    GD   +V TR +      A     +   T   DVY FG VLLEL++G+  + K+  +  R  +E   P++   +K  + ++ID + + D+  +EE   +A ++  C
Sbjct:  117 QEWLAEVNYLGQFSHRHLVKLIGYCLEDE-HRLLVYEFMPRGSLENHLFR----RGLYFQPLSWKLRLKVALGAAKGLAFL-HSSETRVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPIGDK-SHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNLVEWAKPYLV--NKRKIFRVID-NRLQDQYSMEEACKVATLSLRC 332          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.278e-21
Identity = 76/227 (33.48%), Postives = 117/227 (51.54%), Query Frame = 2
Query:   32 ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQ-TSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKS-DDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            + +  E+DL  RV H  LV L+G C E +   +L+Y+YM  G+L   L       ++S   L W  RL+IA   A+GL YLH  C PP++HRD+++ +ILLD+ F+ +LG   LS     G S  +V T         D     ++  T   DV+ FG VLLE++T +  I ++ + +   EW+   L +  + +      I+DPS+  D D    +W    +A SC
Sbjct:  630 KQFKAEVDLLLRVHHINLVTLVGYCDEGQ-HLVLIYEYMSNGNLKQHLSG-----ENSRSPLSWENRLRIAAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFPVG-SETHVSTNVAGSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEIITSQPVIDQTREKSHIGEWVGFKLTNGDIKN------IVDPSMNGDYD-SSSLWKALELAMSC 842          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: RLK5_ARATH (Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.278e-21
Identity = 78/221 (35.29%), Postives = 105/221 (47.51%), Query Frame = 2
Query:   11 SLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAY--------DVYCFGKVLLELVTGKLGI-SKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLIL 646
            S  S  ++ +  E++    + H  +V L   C   +  KLLVY+YM  G LA  LH     +      L W  RL+IA+ AAEGLSYLHH+C PP+VHRDV++S+ILLD  +  ++           S            +  A + G  A    Y        D+Y FG VLLELVTGK    S+  D    +W+       T  DK  L  +IDP L L
Sbjct:  725 SSDSLNRDVFAAEVETLGTIRHKSIVRLWCCCSSGDC-KLLVYEYMPNGSLADVLHG----DRKGGVVLGWPERLRIALDAAEGLSYLHHDCVPPIVHRDVKSSNILLDSDYGAKVADFGIAKVGQMSGSKTPE----AMSGIAGSCGYIAPEYVYTLRVNEKSDIYSFGVVLLELVTGKQPTDSELGDKDMAKWV------CTALDKCGLEPVIDPKLDL 930          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y2242_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g24230 OS=Arabidopsis thaliana GN=At2g24230 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.894e-21
Identity = 74/241 (30.71%), Postives = 110/241 (45.64%), Query Frame = 2
Query:    5 KVSLH--SFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRV-----------TDL----EDDSLQSLD-------WITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDS-HQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGIS----KSDDATTREWLEHTLPHITLHDKEMLTKIIDPSL 640
            KV +H  +   +    EL+   R+ H  LVPL G C+  + +++ +Y+YM  G+L + LH +           TD      D+  Q++        W  R KIA+G A  L++LHH C+PP++HRDV+ASS+ LD  +E RL         G+     ++         +         T   DVYCFG VL EL+TGK  I        D     W+       +L  K   +K IDP +
Sbjct:  574 KVLVHGSTLSDQEAARELEFLGRIKHPNLVPLTGYCIAGD-QRIAIYEYMENGNLQNLLHDLPFGVQTTDDWTTDTWEEETDNGTQNIGTEGPVATWRFRHKIALGTARALAFLHHGCSPPIIHRDVKASSVYLDQNWEPRLSDFGLAKVFGNGLDDEIIHGSPGYLPPEFLQPEHELPTPKSDVYCFGVVLFELMTGKKPIEDDYLDEKDTNLVSWVR------SLVRKNQASKAIDPKI 807          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: WAKLJ_ARATH (Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.894e-21
Identity = 76/229 (33.19%), Postives = 116/229 (50.66%), Query Frame = 2
Query:   26 KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWR-QTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGIS--KSDDATTREWLEHTLPHITLHDKE-MLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            K E ++ E+ + S+++H  +V LLG CLE +   +LVY+++  G+L   LH     + D      W  RL+IA+  A  LSYLH   + P+ HRD+++++I+LD+K   ++            H ++ T         D     SS  T   DVY FG VL EL+TG+  +S  +S +  T         + TL  KE  L+ IID + I D   L +V A A +AR C
Sbjct:  470 KLEEFINEVVILSQINHRNIVKLLGCCLETDVP-ILVYEFIPNGNLFEHLHD----DSDDYTMTTWEVRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNIMLDEKHRAKVSDFGTSRTVTVDHTHLTTVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLAELITGEKSVSFLRSQEYRT------LATYFTLAMKENRLSDIID-ARIRDGCKLNQVTAAAKIARKC 686          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.894e-21
Identity = 74/220 (33.64%), Postives = 117/220 (53.18%), Query Frame = 2
Query:    8 VSLHSFKKESY------MMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASN-SGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSL 640
            V++   K E Y      + E++   ++SH  LV L+G C+E E  +LLVY++M  G L + L R         Q L W  R+K+AIGAA+GL++L H+    +++RD +A++ILLD +F  +L    L++    GD   +V T+ +      A     +   T   DVY FG VLLEL++G+  + KS     +  ++   P+  L DK  L +I+D  L
Sbjct:  118 VAVKKLKTEGYQGHKEWLTEVNYLGQLSHPNLVKLVGYCVEGEN-RLLVYEFMPKGSLENHLFR------RGAQPLTWAIRMKVAIGAAKGLTFL-HDAKSQVIYRDFKAANILLDAEFNSKLSDFGLAKAGPTGDK-THVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKSKVGMEQSLVDWATPY--LGDKRKLFRIMDTRL 326          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y1699_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g69990 OS=Arabidopsis thaliana GN=At1g69990 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.003e-21
Identity = 61/168 (36.31%), Postives = 97/168 (57.74%), Query Frame = 2
Query:   29 KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL--GSLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGK 526
            ++ +  E++   ++ H  LVPLLG C+  E E LLVYK+M  G L S L +           +DW TR+++A+GAA GL++LHH C P  +H+ + ++ ILLD+ F+ R+    L +L +  DS  +  +   +   +    S +  A+ + DVY FG VLLE+VTG+
Sbjct:  333 EKQFRSEINKLGQIRHPNLVPLLGFCVV-EDEILLVYKHMANGTLYSQLQQ---------WDIDWPTRVRVAVGAARGLAWLHHGCQPLYMHQYISSNVILLDEDFDARVIDYGLGKLVSSQDSKDSSFSNGKFGYVA-PEYSSTMVASLSGDVYGFGIVLLEIVTGQ 489          
The following BLAST results are available for this feature:
BLAST of CX287206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
Y2289_ARATH4.041e-2133.77Probable LRR receptor-like serine/threonine-protei... [more]
Y1684_ARATH4.041e-2138.25Probable LRR receptor-like serine/threonine-protei... [more]
WAKLQ_ARATH4.041e-2135.75Wall-associated receptor kinase-like 20 OS=Arabido... [more]
APK1A_ARATH4.041e-2132.30Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
Y4245_ARATH5.278e-2133.48Probable LRR receptor-like serine/threonine-protei... [more]
RLK5_ARATH5.278e-2135.29Receptor-like protein kinase 5 OS=Arabidopsis thal... [more]
Y2242_ARATH6.894e-2130.71Probable LRR receptor-like serine/threonine-protei... [more]
WAKLJ_ARATH6.894e-2133.19Wall-associated receptor kinase-like 10 OS=Arabido... [more]
APK2B_ARATH6.894e-2133.64Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
Y1699_ARATH9.003e-2136.31Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC01005H06SK Veg1 Citrus clementina cDNA clone C01005H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287206 ID=CX287206; Name=CX287206; organism=Citrus clementina; type=EST; length=700bp
AAAAAAGGTCAGTCTGCATTCGTTCAAGAAAGAATCATACATGATGGAAT
TAGATTTGTTCAGCAGAGTTTCACATGCAAGACTGGTGCCACTTTTAGGC
CAATGCTTGGAGCATGAGACAGAGAAACTTTTGGTCTACAAATATATGGT
ATGTGGAGATTTGGCTAGTTCCTTGCACAGGGTTACAGATTTGGAGGATG
ACAGTTTACAATCCCTAGATTGGATTACAAGATTGAAAATTGCAATTGGT
GCGGCGGAAGGTTTATCCTACCTACATCATGAGTGTAACCCTCCTCTTGT
TCACAGAGATGTTCAAGCCAGCAGTATCCTTCTCGATGATAAATTTGAAG
TTCGACTTGGAAGCTTGAGTGAGCTTCATGCTCAAGGAGATTCACACCAA
AATGTGCTAACGAGATTTTTGTGGAGACAAACCTCTGATGCAAGCAATTC
AGGCTCCTCCGCGGCAACTTGTGCCTATGATGTGTACTGCTTTGGAAAAG
TCCTACTTGAGCTTGTAACTGGCAAGCTTGGTATTAGCAAATCAGATGAT
GCTACTACACGAGAGTGGTTGGAACATACACTACCTCACATCACTTTACA
CGACAAGGAAATGTTGACCAAGATCATCGACCCATCTCTGATTCTAGATG
AGGATCTACTGGAAGAAGTATGGGCCATGGCAATTGTAGCCAGATCATGC
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