CX287206

Overview
NameCX287206
Unique NameCX287206
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig39 contig Ccv1_Contig39:1..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: WAKLK_ARATH (Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 4.468e-20
Identity = 73/229 (31.88%), Postives = 115/229 (50.22%), Query Frame = 2
Query:   26 KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWR-QTSDASNSGSSAATCAYDVYCFGKVLLELVTGK---LGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            K E ++ E+ + S+++H  +V LLG CLE E   L VY+++  G+L   +H     E+    +  W  RL+IA+  A  LSYLH   + P+ HRD+++++ILLD+K+  ++       +    H +  T         D    GSS  T   DVY FG VL+EL+TG+   + +S S +      +     H  +  KE     I  + I D    E+V A+A +AR C
Sbjct:  488 KLEEFINEVVILSQINHRHVVKLLGCCLETEVPTL-VYEFIPNGNLFQHIH-----EESDDYTKTWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRTKVSDFGTSRSVTIDHTHWTTVISGTVGYVDPEYYGSSQYTDKSDVYSFGVVLVELITGEKPVITVSNSQE------IRGLADHFRVAMKENRFFEIMDARIRDGCKPEQVMAVANLARRC 704          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.468e-20
Identity = 74/221 (33.48%), Postives = 116/221 (52.49%), Query Frame = 2
Query:    2 KKVSLHSFKKES---YMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSL-QSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQT---SDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKS-DDATTREWLEHTLPHITLHDKEMLTKIIDPSL 640
            K+  + S K+++   +  ELDL SR++HA L+ LLG C E   E+LLVY++M  G L + LH     ++ +L + LDW+ R+ IA+ AA G+ YLH    PP++HRD+++S+IL+D++   R+     L   G          L   T    D         T   DVY FG +LLE+++G+  I    ++    EW    +P I   D   +  ++DP L
Sbjct:  540 KRAIMSSDKQKNSNEFRTELDLLSRLNHAHLLSLLGYC-EECGERLLVYEFMAHGSLHNHLHG----KNKALKEQLDWVKRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFG-LSLLGPVDSGSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMHYEEGNIVEW---AVPLIKAGD---INALLDPVL 748          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.836e-20
Identity = 63/190 (33.16%), Postives = 103/190 (54.21%), Query Frame = 2
Query:   29 KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWR---QTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGIS---KSDDATTREWLE 574
            ++ + +E++    V H  LV LLG C+E    ++LVY+Y+  G+L   LH       +    L W  R+KI  G A+ L+YLH    P +VHRD++AS+IL+DD+F  +L    L++L   G+SH  + TR +        + +N+G        D+Y FG +LLE +TG+  +     +++    EWL+
Sbjct:  221 EKEFRVEVEAIGHVRHKNLVRLLGYCIEG-VHRMLVYEYVNSGNLEQWLHGAMRQHGN----LTWEARMKIITGTAQALAYLHEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLAKLLDSGESH--ITTRVMGTFGYVAPEYANTG--LLNEKSDIYSFGVLLLEAITGRDPVDYGRPANEVNLVEWLK 401          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y1570_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g05700 OS=Arabidopsis thaliana GN=At1g05700 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.836e-20
Identity = 78/243 (32.10%), Postives = 117/243 (48.15%), Query Frame = 2
Query:    5 KVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKL-LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL---GSLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATC--------AYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARS 697
            + S   FK+  +  E+++  RV H  L  L+G    HE +++ L+Y++M  G++A  L            +L W  RL+IA+ AA+GL YLH  C PP+VHRDV+ S+ILL++K   +L   G     H +  SH + L          A   G     C          D+Y FG VLLE++TGK  I +S   T R  +   +  I L     +  +ID  +  D D +  VW +  +A S
Sbjct:  601 ETSAQGFKE--FRSEVEVLVRVHHVNLTALIGYF--HEGDQMGLIYEFMANGNMADHL------AGKYQHTLSWRQRLQIALDAAQGLEYLHCGCKPPIVHRDVKTSNILLNEKNRAKLADFGLSRSFHTESRSHVSTLV---------AGTPGYLDPLCFETNGLNEKSDIYSFGVVLLEMITGKTVIKESQ--TKRVHVSDWVISI-LRSTNDVNNVIDSKMAKDFD-VNSVWKVVELALS 820          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: PSYR1_ARATH (Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.836e-20
Identity = 62/173 (35.84%), Postives = 92/173 (53.18%), Query Frame = 2
Query:   17 HSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASNSGSS-AATCAYDVYCFGKVLLELVTGK 526
            +   ++ +  E+++ SR  H  LV L G C+ H++ ++L+Y +M  G L   LH       +    LDW  RL I  GA+ GL+Y+H  C P +VHRD+++S+ILLD  F+  +    LS L     +H  V T  +          G +  AT   DVY FG V+LEL+TGK
Sbjct:  837 YGMMEKEFKAEVEVLSRAKHENLVALQGYCV-HDSARILIYSFMENGSLDYWLHE----NPEGPAQLDWPKRLNIMRGASSGLAYMHQICEPHIVHRDIKSSNILLDGNFKAYVADFGLSRLILPYRTH--VTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGK 1002          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 5.836e-20
Identity = 76/231 (32.90%), Postives = 115/231 (49.78%), Query Frame = 2
Query:   47 ELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL---GSLSELHAQGDSHQNVLTR----------FLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            EL+L S + H  LVPLLG C E++ +++LVY +M  G L   L+     E    + LDW TRL IA+GAA GL+YLH      ++HRDV++S+ILLD     ++   G       +GDS+ ++  R          +  +Q S+ S           DV+ FG VLLE+V+G+  ++          +E   P+I       + +I+DP  I      E +W +  VA  C
Sbjct:  640 ELNLLSAIQHENLVPLLGYCNEYD-QQILVYPFMSNGSLLDRLYG----EASKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDQSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKS-----------DVFSFGVVLLEIVSGREPLNIKRPRIEWSLVEWAKPYIR---ASKVDEIVDPG-IKGGYHAEALWRVVEVALQC 850          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y1755_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.622e-20
Identity = 75/237 (31.65%), Postives = 116/237 (48.95%), Query Frame = 2
Query:    5 KVSLHSFKK--ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKS-DDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            KV  HS  +  + +  E++L  RV H +LV L+G C + +    L+Y+ M  G+L   L             L W  RLKIA+ +A G+ YLH  C P +VHRDV++++ILL ++FE ++    LS     G+  Q  +    +    D     +S  +   DVY FG VLLE+++G+  I  S ++    EW    L      +   +  I+DP+L  D D     W +  +A SC
Sbjct:  587 KVLSHSSAQGYKEFKTEVELLLRVHHEKLVSLIGYC-DDDNGLALIYELMGKGNLKEHLSG-----KPGCSVLSWPIRLKIALESAIGIEYLHTGCKPKIVHRDVKSTNILLSEEFEAKIADFGLSRSFLIGNEAQPTVVAGTFGYL-DPEYHKTSLLSMKSDVYSFGVVLLEIISGQDVIDLSRENCNIVEWTSFIL------ENGDIESIVDPNLHQDYD-TSSAWKVVELAMSC 809          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: WAKLN_ARATH (Wall-associated receptor kinase-like 18 OS=Arabidopsis thaliana GN=WAKL18 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.622e-20
Identity = 74/233 (31.76%), Postives = 120/233 (51.50%), Query Frame = 2
Query:   26 KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQT-------SDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKE-MLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            K + ++ E+ + S+++H  +V LLG CLE E   +LVY++++ G+L   +H     E+    ++ W  RL+IA+  A  LSYLH   + P+ HRD+++++ILLD+K+  ++         G S    + +  W           D     SS  T   DVY FG +L EL+TG   +    +  T+E +     H  +  KE  LT IID + I ++   E+V A+A VA  C
Sbjct:  490 KLQEFINEVVILSQINHRHVVKLLGCCLETEVP-MLVYEFIINGNLFKHIHE----EESDDYTMLWGMRLRIAVDIAGALSYLHSSASSPIYHRDIKSTNILLDEKYRAKVADF------GTSRSVTIDQTHWTTVISGTVGYVDPEYYQSSQYTEKSDVYSFGVILAELITGDKPVIMVQN--TQE-IVALAEHFRVAMKEKRLTDIID-ARIRNDCKPEQVMAVAKVAMKC 707          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: WAKLF_ARATH (Wall-associated receptor kinase-like 6 OS=Arabidopsis thaliana GN=WAKL6 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.622e-20
Identity = 62/174 (35.63%), Postives = 95/174 (54.60%), Query Frame = 2
Query:   26 KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL--SELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISK 541
            K E ++ E+ L S+++H  +V LLG CL  E   +LVY+Y+  GDL   LH  ++  D    ++ W  RL+IAI  A  LSY+H   + P+ HRD++ ++ILLD+K+  ++     S       +H   L    +    D     SS  T   DVY FG VL+EL+TG+  +S+
Sbjct:  469 KMEEFINEVVLLSQINHRNIVKLLGCCLGTEVP-VLVYEYIPNGDLFKRLHEKSESND---YTMTWEVRLRIAIEIAGALSYMHSAASIPIYHRDIKTTNILLDEKYRAKVSDFGTSRSITIAQTHLTTLVAGTFGY-MDPEYFLSSQYTDKSDVYSFGVVLVELITGEKPLSR 637          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.622e-20
Identity = 63/176 (35.80%), Postives = 93/176 (52.84%), Query Frame = 2
Query:   29 KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAY--------DVYCFGKVLLELVTGK 526
            ++S+  E+     + H  +V  LG C    T +LL+Y YM  G L S LH           SLDW  R +I +GAA+GL+YLHH+C PP+VHRD++A++IL+   FE  +    L++L  +GD  +           + A + G  A    Y        DVY +G V+LE++TGK
Sbjct:  833 RDSFSAEVKTLGTIRHKNIVRFLGCCWNRNT-RLLMYDYMPNGSLGSLLHERRG------SSLDWDLRYRILLGAAQGLAYLHHDCLPPIVHRDIKANNILIGLDFEPYIADFGLAKLVDEGDIGR--------CSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGK 993          
The following BLAST results are available for this feature:
BLAST of CX287206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
WAKLK_ARATH4.468e-2031.88Putative wall-associated receptor kinase-like 11 O... [more]
ACR4_ARATH4.468e-2033.48Serine/threonine-protein kinase-like protein ACR4 ... [more]
Y2296_ARATH5.836e-2033.16Probable receptor-like protein kinase At2g42960 OS... [more]
Y1570_ARATH5.836e-2032.10Probable LRR receptor-like serine/threonine-protei... [more]
PSYR1_ARATH5.836e-2035.84Tyrosine-sulfated glycopeptide receptor 1 OS=Arabi... [more]
NORK_MEDTR5.836e-2032.90Nodulation receptor kinase OS=Medicago truncatula ... [more]
Y1755_ARATH7.622e-2031.65Probable LRR receptor-like serine/threonine-protei... [more]
WAKLN_ARATH7.622e-2031.76Wall-associated receptor kinase-like 18 OS=Arabido... [more]
WAKLF_ARATH7.622e-2035.63Wall-associated receptor kinase-like 6 OS=Arabidop... [more]
RCH2_ARATH7.622e-2035.80Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC01005H06SK Veg1 Citrus clementina cDNA clone C01005H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287206 ID=CX287206; Name=CX287206; organism=Citrus clementina; type=EST; length=700bp
AAAAAAGGTCAGTCTGCATTCGTTCAAGAAAGAATCATACATGATGGAAT
TAGATTTGTTCAGCAGAGTTTCACATGCAAGACTGGTGCCACTTTTAGGC
CAATGCTTGGAGCATGAGACAGAGAAACTTTTGGTCTACAAATATATGGT
ATGTGGAGATTTGGCTAGTTCCTTGCACAGGGTTACAGATTTGGAGGATG
ACAGTTTACAATCCCTAGATTGGATTACAAGATTGAAAATTGCAATTGGT
GCGGCGGAAGGTTTATCCTACCTACATCATGAGTGTAACCCTCCTCTTGT
TCACAGAGATGTTCAAGCCAGCAGTATCCTTCTCGATGATAAATTTGAAG
TTCGACTTGGAAGCTTGAGTGAGCTTCATGCTCAAGGAGATTCACACCAA
AATGTGCTAACGAGATTTTTGTGGAGACAAACCTCTGATGCAAGCAATTC
AGGCTCCTCCGCGGCAACTTGTGCCTATGATGTGTACTGCTTTGGAAAAG
TCCTACTTGAGCTTGTAACTGGCAAGCTTGGTATTAGCAAATCAGATGAT
GCTACTACACGAGAGTGGTTGGAACATACACTACCTCACATCACTTTACA
CGACAAGGAAATGTTGACCAAGATCATCGACCCATCTCTGATTCTAGATG
AGGATCTACTGGAAGAAGTATGGGCCATGGCAATTGTAGCCAGATCATGC
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