CX287206

Overview
NameCX287206
Unique NameCX287206
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig39 contig Ccv1_Contig39:1..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.622e-20
Identity = 76/231 (32.90%), Postives = 115/231 (49.78%), Query Frame = 2
Query:   47 ELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL---GSLSELHAQGDSHQNVLTR----------FLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            EL+L S + H  LVPLLG C E++ +++LVY +M  G L   L+     E    + LDW TRL IA+GAA GL+YLH      ++HRDV++S+ILLD     ++   G       +GDS+ ++  R          +  +Q S+ S           DV+ FG VLLE+V+G+  ++          +E   P+I       + +I+DP  I      E +W +  VA  C
Sbjct:  639 ELNLLSAIQHENLVPLLGYCNEYD-QQILVYPFMSNGSLLDRLYG----EPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKS-----------DVFSFGVVLLEIVSGREPLNIKRPRVEWSLVEWAKPYIR---ASKVDEIVDPG-IKGGYHAEALWRVVEVALQC 849          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: WAKLM_ARATH (Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana GN=WAKL17 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 9.954e-20
Identity = 70/232 (30.17%), Postives = 116/232 (50.00%), Query Frame = 2
Query:   26 KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQT-------SDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            K + ++ E+ + S+++H  +V LLG CLE E   +LVY++++ G+L   +H     E+    ++ W  RL+IA+  A  LSYLH   + P+ HRD+++++ILLD+K+  ++         G S    + +  W           D     SS  T   DVY FG +L EL+TG   +    +  T+E +     H  +  KE     I  + I D+   E+V A+A +A  C
Sbjct:  481 KLQEFINEVVILSQINHRHVVKLLGCCLETEVP-ILVYEFIINGNLFKHIHE----EEADDYTMIWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRAKVADF------GTSRSVTIDQTHWTTVISGTVGYVDPEYYRSSQYTEKSDVYSFGVILAELITGDKPVIMVQN--TQEIIA-LAEHFRVAMKERRLSDIMDARIRDDSKPEQVMAVANLAMKC 698          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.698e-19
Identity = 80/232 (34.48%), Postives = 106/232 (45.69%), Query Frame = 2
Query:   29 KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAY--------DVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            K  ++ E+   S V H  LV L G C E E  +LLVY+Y+  G L  +L     L       LDW TR +I +G A GL YLH E    +VHRDV+AS+ILLD K   ++          D   ++ TR        A   G  A   A         DVY FG V LELV+G+    ++ +   R  LE       LH+K    ++ID    L E  +EE   M  +A  C
Sbjct:  731 KGQFVAEIVAISAVQHRNLVKLYGCCYEGE-HRLLVYEYLPNGSLDQALFGEKTLH------LDWSTRYEICLGVARGLVYLHEEARLRIVHRDVKASNILLDSKLVPKVSDFGLAKLYDDKKTHISTRV-------AGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSDENLEDEKRYLLEWAW---NLHEKGREVELIDHQ--LTEFNMEEGKRMIGIALLC 943          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.698e-19
Identity = 65/204 (31.86%), Postives = 104/204 (50.98%), Query Frame = 2
Query:   38 YMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLI 643
            +  E+ + S++ H  LV L+G C E++ E +LVY+YM  G L   L+   + + + + +L W  RL+I IG+A GL YLH      ++HRDV+ ++ILLD+    ++    LS+     + H +   +  +    D         T   DVY FG VL E++  +  I+       RE +      + LH K ML KIIDP ++
Sbjct:  566 FQTEIQMLSKLRHRHLVSLIGFCDENK-EMILVYEYMSNGPLRDHLYGSKENDPNPIPTLSWKQRLEICIGSARGLHYLHTGAAQGIIHRDVKTTNILLDENLVAKVSDFGLSKDAPMDEGHVSTAVKGSFGYL-DPEYFRRQQLTDKSDVYSFGVVLFEVLCARPVINPQ---LPREQVNLAEYAMNLHRKGMLEKIIDPKIV 764          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y1518_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.698e-19
Identity = 77/231 (33.33%), Postives = 114/231 (49.35%), Query Frame = 2
Query:   32 ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL---GSLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTK-----IIDPSLILDEDLLEEVWAMAIVARSC 700
            + +  E++L  RV H  LV L+G C + +    L+Y+YM  GDL  ++             L W  R++IA+ AA+GL YLH+ C PP+VHRDV+ ++ILL+++   +L   G        G+ H + +         D     ++  +   DVY FG VLLE+VT +  I K     TRE      PHI      MLTK     I+DP L+ D D     W +  +A +C
Sbjct:  622 KEFKAEVELLLRVHHRHLVGLVGYCDDGDN-LALIYEYMANGDLRENMSGKR-----GGNVLTWENRMQIAVEAAQGLEYLHNGCRPPMVHRDVKTTNILLNERCGAKLADFGLSRSFPIDGECHVSTVVAGT-PGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVIDK-----TRE-----RPHINDWVGFMLTKGDIKSIVDPKLMGDYD-TNGAWKIVELALAC 834          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: WAKLB_ARATH (Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.698e-19
Identity = 72/224 (32.14%), Postives = 113/224 (50.45%), Query Frame = 2
Query:   32 ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWR-QTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            E ++ E+ + ++++H  +V LLG CLE E   +LVY+++  GDL   LH   D  DD   ++ W  RL IAI  A  LSYLH   + P+ HRD++ ++ILLD++   ++       +      ++ T+        D     SS  T   DVY FG VL+EL+TG+   S+      R    H +  +    KE     I    I DE  +++V ++A +AR C
Sbjct:  455 EEFINEVVVLAQINHRNIVKLLGCCLETEVP-VLVYEFVPNGDLCKRLH---DESDD--YTMTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDERNRAKVSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEYFQSSKFTEKSDVYSFGVVLVELLTGEKPSSRVRSEENRGLAAHFVEAV----KENRVLDIVDDRIKDECNMDQVMSVANLARRC 668          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: SUB_ARATH (Protein STRUBBELIG OS=Arabidopsis thaliana GN=SUB PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.698e-19
Identity = 59/192 (30.73%), Postives = 99/192 (51.56%), Query Frame = 2
Query:   65 RVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSL 640
            ++    ++ LLG C E   ++LLVY+Y   G L  +LH    L+    + L W  R+ IA+GA++ L +LH  C PP+VH++ ++S +LLD K  VR+      +       + +  +       A      + TC  DV+  G V+LEL+TG+    ++     +   +  +P   LHD + LT+++DPSL
Sbjct:  549 KLKRGHILELLGYCNEFG-QRLLVYEYCPNGSLQDALH----LDRKLHKKLTWNVRINIALGASKALQFLHEVCQPPVVHQNFKSSKVLLDGKLSVRVADSGLAYMLPPRPTSQMAGYA------APEVEYGSYTCQSDVFSLGVVMLELLTGRRPFDRTRPRGHQTLAQWAIPR--LHDIDALTRMVDPSL 727          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y2899_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana GN=At2g28990 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.218e-19
Identity = 80/229 (34.93%), Postives = 111/229 (48.47%), Query Frame = 2
Query:   38 YMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQ-TSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTK-----IIDPSLILDEDLLEEVWAMAIVARSC 700
            +  E++L  RV H  LV L+G C E E    L+Y+YM  GDL   L             L W +RLKI + AA GL YLH  C PP+VHRD++ ++ILLD   + +L    LS     G + +NV T         D     ++  T   D+Y FG VLLE+++ +  I +S +           PHI      M+TK     I+DP+L  D D +  VW    +A SC
Sbjct:  618 FKAEVELLMRVHHINLVSLVGYCDEGE-HLALIYEYMPNGDLKQHLSG-----KHGGFVLSWESRLKIVLDAALGLEYLHTGCVPPMVHRDIKTTNILLDQHLQAKLADFGLSRSFPIG-NEKNVSTVVAGTPGYLDPEYYQTNWLTEKSDIYSFGIVLLEIISNRPIIQQSREK----------PHIVEWVSFMITKGDLRSIMDPNLHQDYD-IGSVWKAIELAMSC 828          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: IKU2_ARATH (Receptor-like protein kinase HAIKU2 OS=Arabidopsis thaliana GN=IKU2 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.218e-19
Identity = 76/228 (33.33%), Postives = 117/228 (51.32%), Query Frame = 2
Query:   47 ELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAY--------DVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            E+   S + H  +V L    +  E  KLLVY+YM  G L   LH     E    Q + W  R  +A+GAA+GL YLHH  + P++HRDV++S+ILLD+++  R+    L+++  Q DS Q   +  L + T      G  A   AY        DVY FG VL+ELVTGK  + ++D     + +          ++EM+ K+ID S  ++++  E+   +  +A  C
Sbjct:  733 EVATLSNIKHINVVKLFCS-ITCEDSKLLVYEYMPNGSLWEQLH-----ERRGEQEIGWRVRQALALGAAKGLEYLHHGLDRPVIHRDVKSSNILLDEEWRPRIADFGLAKI-IQADSVQRDFSAPLVKGT-----LGYIAPEYAYTTKVNEKSDVYSFGVVLMELVTGKKPL-ETDFGENNDIVMWVWSVSKETNREMMMKLIDTS--IEDEYKEDALKVLTIALLC 945          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.896e-19
Identity = 71/229 (31.00%), Postives = 112/229 (48.91%), Query Frame = 2
Query:   38 YMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAY--------DVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            ++ E+ + S + H  LV L G C+E   + +LVY+Y+    L+ +L      ++ S   LDW TR KI +G A+GL++LH E    +VHRD++AS++LLD     ++          D + ++ TR        A   G  A   A         DVY FG V LE+V+GK   S ++   T +++        L ++  L +++DP+L  D    EE   M  VA  C
Sbjct:  719 FVNEIGMISALQHPNLVKLYGCCVEGN-QLILVYEYLENNCLSRALF---GKDESSRLKLDWSTRKKIFLGIAKGLTFLHEESRIKIVHRDIKASNVLLDKDLNAKISDFGLAKLNDDGNTHISTRI-------AGTIGYMAPEYAMRGYLTEKADVYSFGVVALEIVSGK---SNTNFRPTEDFVYLLDWAYVLQERGSLLELVDPTLASDYS-EEEAMLMLNVALMC 932          
The following BLAST results are available for this feature:
BLAST of CX287206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
NORK_PEA7.622e-2032.90Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
WAKLM_ARATH9.954e-2030.17Wall-associated receptor kinase-like 17 OS=Arabido... [more]
Y5614_ARATH1.698e-1934.48Probable LRR receptor-like serine/threonine-protei... [more]
Y5613_ARATH1.698e-1931.86Probable receptor-like protein kinase At5g61350 OS... [more]
Y1518_ARATH1.698e-1933.33Probable LRR receptor-like serine/threonine-protei... [more]
WAKLB_ARATH1.698e-1932.14Wall-associated receptor kinase-like 2 OS=Arabidop... [more]
SUB_ARATH1.698e-1930.73Protein STRUBBELIG OS=Arabidopsis thaliana GN=SUB ... [more]
Y2899_ARATH2.218e-1934.93Probable leucine-rich repeat receptor-like protein... [more]
IKU2_ARATH2.218e-1933.33Receptor-like protein kinase HAIKU2 OS=Arabidopsis... [more]
Y1765_ARATH2.896e-1931.00Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC01005H06SK Veg1 Citrus clementina cDNA clone C01005H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287206 ID=CX287206; Name=CX287206; organism=Citrus clementina; type=EST; length=700bp
AAAAAAGGTCAGTCTGCATTCGTTCAAGAAAGAATCATACATGATGGAAT
TAGATTTGTTCAGCAGAGTTTCACATGCAAGACTGGTGCCACTTTTAGGC
CAATGCTTGGAGCATGAGACAGAGAAACTTTTGGTCTACAAATATATGGT
ATGTGGAGATTTGGCTAGTTCCTTGCACAGGGTTACAGATTTGGAGGATG
ACAGTTTACAATCCCTAGATTGGATTACAAGATTGAAAATTGCAATTGGT
GCGGCGGAAGGTTTATCCTACCTACATCATGAGTGTAACCCTCCTCTTGT
TCACAGAGATGTTCAAGCCAGCAGTATCCTTCTCGATGATAAATTTGAAG
TTCGACTTGGAAGCTTGAGTGAGCTTCATGCTCAAGGAGATTCACACCAA
AATGTGCTAACGAGATTTTTGTGGAGACAAACCTCTGATGCAAGCAATTC
AGGCTCCTCCGCGGCAACTTGTGCCTATGATGTGTACTGCTTTGGAAAAG
TCCTACTTGAGCTTGTAACTGGCAAGCTTGGTATTAGCAAATCAGATGAT
GCTACTACACGAGAGTGGTTGGAACATACACTACCTCACATCACTTTACA
CGACAAGGAAATGTTGACCAAGATCATCGACCCATCTCTGATTCTAGATG
AGGATCTACTGGAAGAAGTATGGGCCATGGCAATTGTAGCCAGATCATGC
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