CX287239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYB06_ANTMA (Myb-related protein 306 OS=Antirrhinum majus GN=MYB306 PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.071e-38 Identity = 71/118 (60.17%), Postives = 87/118 (73.73%), Query Frame = 3 Query: 72 MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRK 425 MG CC++ VK+G W+PEED L+ YI HG G W +P GL RC KSCRLRW NYLRP I+RG FT EEK+II L +++GNRWA IAS+LP RTDN+IKNYWN+ +KKK+ K Sbjct: 1 MGRPPCCDKIGVKKGPWTPEEDIILVSYIQEHGPGNWRAIPSNTGLLRCSKSCRLRWTNYLRPGIKRGDFTEHEEKMIIHLQALLGNRWAAIASYLPHRTDNDIKNYWNTHLKKKLEK 118
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: RAX2_ARATH (Transcription factor RAX2 OS=Arabidopsis thaliana GN=RAX2 PE=1 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 4.069e-38 Identity = 72/117 (61.54%), Postives = 89/117 (76.07%), Query Frame = 3 Query: 72 MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGC-WSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKI 419 MG CC++ VKRG WSPEED KL YI G G W +P KAGL+RCGKSCRLRW+NYLRP+IR G FT EE+ +I SL + +G+RW+ IA+HL GRTDN+IKNYWN+ +KKK+ Sbjct: 1 MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLNYLRPNIRHGDFTEEEDNIIYSLFASIGSRWSVIAAHLQGRTDNDIKNYWNTKLKKKL 117
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: RAX3_ARATH (Transcription factor RAX3 OS=Arabidopsis thaliana GN=RAX3 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 2.637e-37 Identity = 69/117 (58.97%), Postives = 89/117 (76.07%), Query Frame = 3 Query: 72 MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGC-WSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKI 419 MG CC++ VK+G WSPEED KL YI G G W +P+K GL+RCGKSCRLRW+NYLRP+I+ G F+ EEE +I SL+ +G+RW+ IA+ LPGRTDN+IKNYWN+ +KKK+ Sbjct: 1 MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEENIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKL 117
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: LAF1_ARATH (Transcription factor LAF1 OS=Arabidopsis thaliana GN=LAF1 PE=1 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 7.673e-37 Identity = 66/106 (62.26%), Postives = 86/106 (81.13%), Query Frame = 3 Query: 99 QKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKK 416 ++ ++GLWSPEEDEKL +I ++G+ CW+ VP KAGLQR GKSCRLRWINYLRP ++R + EEE+ I++ HS +GN+W+ IA LPGRTDNEIKNYW+S +KKK Sbjct: 8 ERHRKGLWSPEEDEKLRSFILSYGHSCWTTVPIKAGLQRNGKSCRLRWINYLRPGLKRDMISAEEEETILTFHSSLGNKWSQIAKFLPGRTDNEIKNYWHSHLKKK 113
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYB5_ARATH (Transcription repressor MYB5 OS=Arabidopsis thaliana GN=MYB5 PE=1 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.002e-36 Identity = 64/111 (57.66%), Postives = 85/111 (76.58%), Query Frame = 3 Query: 87 CCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKI 419 CC + +KRG W+ EEDE L+ +I G G W +P++AGL RCGKSCRLRW+NYLRP ++RG T +EE LI+ LH ++GNRW+ IA +PGRTDNEIKNYWN+ ++KK+ Sbjct: 17 CCTKMGMKRGPWTVEEDEILVSFIKKEGEGRWRSLPKRAGLLRCGKSCRLRWMNYLRPSVKRGGITSDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLRKKL 127
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: TT2_ARATH (Transcription factor TT2 OS=Arabidopsis thaliana GN=TT2 PE=1 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 2.916e-36 Identity = 66/110 (60.00%), Postives = 88/110 (80.00%), Query Frame = 3 Query: 96 QQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRK 425 ++++ RG W+ ED+ L YITTHG G WS +P +AGL+RCGKSCRLRW NYLRP I+RG + +EE+LII LH+++GNRW+ IA LPGRTDNEIKN+WNS ++K++ K Sbjct: 11 REELNRGAWTDHEDKILRDYITTHGEGKWSTLPNQAGLKRCGKSCRLRWKNYLRPGIKRGNISSDEEELIIRLHNLLGNRWSLIAGRLPGRTDNEIKNHWNSNLRKRLPK 120
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYB23_ARATH (Transcription factor MYB23 OS=Arabidopsis thaliana GN=MYB23 PE=1 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 4.974e-36 Identity = 61/108 (56.48%), Postives = 85/108 (78.70%), Query Frame = 3 Query: 96 QQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKI 419 + + K+GLW+ EED+ L+ Y+ THG G W+ + +K GL+RCGKSCRLRW+NYL P++ RG FT +EE LII LH ++GNRW+ IA +PGRTDN++KNYWN+ + KK+ Sbjct: 9 EHEYKKGLWTVEEDKILMDYVRTHGQGHWNRIAKKTGLKRCGKSCRLRWMNYLSPNVNRGNFTDQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKKL 116
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYB15_ANTMA (Myb-related protein 315 OS=Antirrhinum majus GN=MYB315 PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 6.496e-36 Identity = 66/117 (56.41%), Postives = 85/117 (72.65%), Query Frame = 3 Query: 72 MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIR 422 M C + +KRG W+ EED+KL Y+ +G W +P+ AGL RCGKSCRLRW+NYLRPD+++G T EE II LH+ +GNRW+ IA H+PGRTDNEIKNYWN+ IKKK++ Sbjct: 1 MERQPCREKFGLKRGPWTEEEDQKLTSYVLKNGIQGWRVIPKLAGLSRCGKSCRLRWMNYLRPDLKKGPLTEMEENQIIELHAHLGNRWSKIALHIPGRTDNEIKNYWNTHIKKKLK 117
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: WER_ARATH (Transcription factor WER OS=Arabidopsis thaliana GN=WER PE=1 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 2.468e-35 Identity = 60/104 (57.69%), Postives = 83/104 (79.81%), Query Frame = 3 Query: 108 KRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKI 419 K+GLW+ EED+ L+ Y+ HG G W+ + +K GL+RCGKSCRLRW+NYL P+++RG FT +EE LII LH ++GNRW+ IA +PGRTDN++KNYWN+ + KK+ Sbjct: 17 KKGLWTVEEDKILMDYVKAHGKGHWNRIAKKTGLKRCGKSCRLRWMNYLSPNVKRGNFTEQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKKL 120
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYB82_ARATH (Transcription factor MYB82 OS=Arabidopsis thaliana GN=MYB82 PE=1 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 2.468e-35 Identity = 63/104 (60.58%), Postives = 82/104 (78.85%), Query Frame = 3 Query: 105 VKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKK 416 VKRGLW PEED L Y+ THG G W+++ ++GL+R GKSCRLRW NYLRP+I+RG +P+E+ LII +H ++GNRW+ IA LPGRTDNE+KNYWN+ + KK Sbjct: 12 VKRGLWKPEEDMILKSYVETHGEGNWADISRRSGLKRGGKSCRLRWKNYLRPNIKRGSMSPQEQDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKK 115 The following BLAST results are available for this feature:
BLAST of CX287239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX287239 ID=CX287239; Name=CX287239; organism=Citrus clementina; type=EST; length=503bpback to top |