CX287251
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287251 vs. ExPASy Swiss-Prot
Match: RBS1_PETHY (Ribulose bisphosphate carboxylase small chain SSU8, chloroplastic OS=Petunia hybrida GN=RBCS PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.008e-12 Identity = 32/45 (71.11%), Postives = 39/45 (86.67%), Query Frame = 2 Query: 5 TDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 139 TDATQVL E+ E +K YP++++RIIGFDN RQVQCISF+A KPPG Sbjct: 135 TDATQVLGELQEAKKAYPNAWIRIIGFDNVRQVQCISFIAYKPPG 179
BLAST of CX287251 vs. ExPASy Swiss-Prot
Match: RBS_PYRPY (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.928e-12 Identity = 32/45 (71.11%), Postives = 38/45 (84.44%), Query Frame = 2 Query: 5 TDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 139 TD++QVLKE+ E +K YP SF+RIIGFDN RQVQCISF+A KP G Sbjct: 138 TDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKPAG 182
BLAST of CX287251 vs. ExPASy Swiss-Prot
Match: RBS_MALSP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Malus sp. GN=RBCS PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.928e-12 Identity = 32/45 (71.11%), Postives = 38/45 (84.44%), Query Frame = 2 Query: 5 TDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 139 TD++QVLKE+ E +K YP SF+RIIGFDN RQVQCISF+A KP G Sbjct: 138 TDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKPAG 182
BLAST of CX287251 vs. ExPASy Swiss-Prot
Match: RBS_FAGCR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Fagus crenata GN=RBCS1 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.928e-12 Identity = 33/44 (75.00%), Postives = 36/44 (81.82%), Query Frame = 2 Query: 5 TDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 136 TDATQVL E+ E K YP S +RIIGFDNKRQVQCISF+A KPP Sbjct: 137 TDATQVLAELQEASKTYPTSHIRIIGFDNKRQVQCISFIAYKPP 180
BLAST of CX287251 vs. ExPASy Swiss-Prot
Match: RBS_BETVE (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.131e-12 Identity = 32/45 (71.11%), Postives = 39/45 (86.67%), Query Frame = 2 Query: 8 DATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPGV 142 D++QVLKE+ E +K YP +F+RIIGFDNKRQVQ ISF+A KPPGV Sbjct: 138 DSSQVLKELEECKKAYPSAFIRIIGFDNKRQVQIISFIAYKPPGV 182
BLAST of CX287251 vs. ExPASy Swiss-Prot
Match: RBS_GLYTA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Glycine tabacina GN=RBCS PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.752e-12 Identity = 31/44 (70.45%), Postives = 38/44 (86.36%), Query Frame = 2 Query: 5 TDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 136 TDA+QVLKE+ E + YP++F+RIIGFDN RQVQCISF+A KPP Sbjct: 133 TDASQVLKELQEAKTAYPNAFIRIIGFDNVRQVQCISFIAYKPP 176
BLAST of CX287251 vs. ExPASy Swiss-Prot
Match: RBS8_NICPL (Ribulose bisphosphate carboxylase small chain 8B, chloroplastic OS=Nicotiana plumbaginifolia GN=RBCS-8B PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.752e-12 Identity = 33/45 (73.33%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 5 TDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 139 TDATQVL EV E +K YP ++VRIIGFDN RQVQCISF+A KP G Sbjct: 135 TDATQVLAEVEEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of CX287251 vs. ExPASy Swiss-Prot
Match: RBS7_FLAPR (Ribulose bisphosphate carboxylase small chain 7, chloroplastic OS=Flaveria pringlei GN=RBCS7 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.752e-12 Identity = 30/45 (66.67%), Postives = 39/45 (86.67%), Query Frame = 2 Query: 5 TDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 139 TD+ QV+KE+ E +KEYP +++RIIGFDN RQVQCISF+A+KP G Sbjct: 128 TDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFIASKPDG 172
BLAST of CX287251 vs. ExPASy Swiss-Prot
Match: RBS5_FLAPR (Ribulose bisphosphate carboxylase small chain 5, chloroplastic OS=Flaveria pringlei GN=RBCS5 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.752e-12 Identity = 30/45 (66.67%), Postives = 39/45 (86.67%), Query Frame = 2 Query: 5 TDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 139 TD+ QV+KE+ E +KEYP +++RIIGFDN RQVQCISF+A+KP G Sbjct: 128 TDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFIASKPDG 172
BLAST of CX287251 vs. ExPASy Swiss-Prot
Match: RBS4_FLAPR (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Flaveria pringlei GN=RBCS4 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.752e-12 Identity = 30/45 (66.67%), Postives = 39/45 (86.67%), Query Frame = 2 Query: 5 TDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 139 TD+ QV+KE+ E +KEYP +++RIIGFDN RQVQCISF+A+KP G Sbjct: 133 TDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFIASKPDG 177 The following BLAST results are available for this feature:
BLAST of CX287251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287251 ID=CX287251; Name=CX287251; organism=Citrus clementina; type=EST; length=371bpback to top |