CX287253
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_SYNP6 (NAD(P)H-quinone oxidoreductase subunit 3 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=ndhC PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.101e-40 Identity = 74/120 (61.67%), Postives = 98/120 (81.67%), Query Frame = 1 Query: 175 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 +F+L Y+ FL+ISS++PIL+ S +L P +GPE+ ++YESG+EP+G AW+QF +RYYMFALVFV+FDVETVFLYPWA++F+ LG+ F+EA IF+ IL+VGL YAWRKGALEWS Sbjct: 14 VFVLNGYEYLLGFLLISSLVPILSLTASRLLRPGRRGPERRTTYESGMEPIGGAWIQFNVRYYMFALVFVIFDVETVFLYPWAVAFNRLGLLAFVEALIFITILVVGLAYAWRKGALEWS 133
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_SYNJB (NAD(P)H-quinone oxidoreductase subunit 3 OS=Synechococcus sp. GN=ndhC PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.101e-40 Identity = 78/120 (65.00%), Postives = 96/120 (80.00%), Query Frame = 1 Query: 175 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 MF+L Y+ FLI+ S++PILA SA+LAP +G + S+YESG+EP G AW+QF IRYYMFALVFV+FDVETVFLYPWA++F LG+ F+EA IF+ IL+VGLVYAWRKGALEWS Sbjct: 1 MFVLSGYEYLLVFLIVCSLLPILALGASALLAPKRRGSLRRSTYESGMEPFGQAWIQFNIRYYMFALVFVIFDVETVFLYPWAVAFHRLGLLAFVEALIFIAILVVGLVYAWRKGALEWS 120
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_SYNE7 (NAD(P)H-quinone oxidoreductase subunit 3 OS=Synechococcus elongatus (strain PCC 7942) GN=ndhC PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.101e-40 Identity = 74/120 (61.67%), Postives = 98/120 (81.67%), Query Frame = 1 Query: 175 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 +F+L Y+ FL+ISS++PIL+ S +L P +GPE+ ++YESG+EP+G AW+QF +RYYMFALVFV+FDVETVFLYPWA++F+ LG+ F+EA IF+ IL+VGL YAWRKGALEWS Sbjct: 14 VFVLNGYEYLLGFLLISSLVPILSLTASRLLRPGRRGPERRTTYESGMEPIGGAWIQFNVRYYMFALVFVIFDVETVFLYPWAVAFNRLGLLAFVEALIFITILVVGLAYAWRKGALEWS 133
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_HUPLU (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Huperzia lucidula GN=ndhC PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 2.744e-40 Identity = 78/120 (65.00%), Postives = 95/120 (79.17%), Query Frame = 1 Query: 175 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 MFL+ KY+ FW FL+++S+IP +A IS+ AP+ KGPEK +SYESGIEP+GDAW+QF+IRYYMFA VFV+ D ETV LYPWAM F+ LGVP EA I + I IVG VYAWR+GA EWS Sbjct: 1 MFLISKYNYFWLFLLLASLIPPVASPISSYSAPVGKGPEKFTSYESGIEPIGDAWIQFQIRYYMFASVFVISDAETVSLYPWAMCFNELGVPASAEASISVTIPIVGSVYAWRRGASEWS 120
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_SYNR3 (NAD(P)H-quinone oxidoreductase subunit 3 OS=Synechococcus sp. (strain RCC307) GN=ndhC PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 6.113e-40 Identity = 75/120 (62.50%), Postives = 97/120 (80.83%), Query Frame = 1 Query: 175 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 MF+L YD F FL+I++ +P+LA + +AVLAP ++ E+ +YESG+EP+G AW+QF IRYYMFALVFV+FDVETVFLYPWA++F LG+ FIEA +F+ IL+V L YAWRKGALEWS Sbjct: 1 MFVLPGYDAFLGFLLIAAAVPVLALITNAVLAPRSRQGERRLTYESGMEPVGGAWIQFNIRYYMFALVFVIFDVETVFLYPWAVAFHRLGLLAFIEALVFIAILVVALAYAWRKGALEWS 120
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_SYNJA (NAD(P)H-quinone oxidoreductase subunit 3 OS=Synechococcus sp. (strain JA-3-3Ab) GN=ndhC PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 6.113e-40 Identity = 76/120 (63.33%), Postives = 96/120 (80.00%), Query Frame = 1 Query: 175 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 MF+L Y+ FLI+ +++P+LA SA+LAP +G + S+YESG+EP G AW+QF IRYYMFALVFV+FDVETVFLYPWA++F LG+ F+EA IF+ IL+VGLVYAWRKGALEWS Sbjct: 1 MFVLSGYEYLLVFLIVCALLPVLALGASALLAPKRRGSLRRSTYESGMEPFGQAWIQFNIRYYMFALVFVIFDVETVFLYPWAVAFHRLGLLAFVEALIFIAILVVGLVYAWRKGALEWS 120
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_NEPOL (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Nephroselmis olivacea GN=ndhC PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 6.113e-40 Identity = 74/120 (61.67%), Postives = 95/120 (79.17%), Query Frame = 1 Query: 175 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 M +L Y AF +I+S+IP++A S +L P GPE+ ++YESGIEPMG+AW+QF IRYYMFALVFVVFDVET+FLYPWA++F LG+ F E IF+++L++GLVYAWRKGALEWS Sbjct: 1 MMILEGYGSVLAFFVIASLIPVIALSASKLLRPRGGGPERRTTYESGIEPMGEAWIQFNIRYYMFALVFVVFDVETLFLYPWAVTFQRLGLSAFFEVLIFIIVLLIGLVYAWRKGALEWS 120
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_CYAA5 (NAD(P)H-quinone oxidoreductase subunit 3 OS=Cyanothece sp. (strain ATCC 51142) GN=ndhC PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 6.113e-40 Identity = 77/120 (64.17%), Postives = 94/120 (78.33%), Query Frame = 1 Query: 175 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 MF+L Y+ FL+ S+IPILA S +L P GPE+ ++YESG+EP+G AW+QF IRYYMFALVFVVFDVETVFLYPWA++F LG+ F+EA IF+ IL+V LVYAWRKGALEWS Sbjct: 1 MFVLNGYEYVLGFLLACSLIPILALTASKILRPSGGGPERRTTYESGMEPIGGAWIQFNIRYYMFALVFVVFDVETVFLYPWAVAFSRLGLLAFVEALIFIAILVVALVYAWRKGALEWS 120
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_ACAM1 (NAD(P)H-quinone oxidoreductase subunit 3 OS=Acaryochloris marina (strain MBIC 11017) GN=ndhC PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 6.113e-40 Identity = 78/120 (65.00%), Postives = 94/120 (78.33%), Query Frame = 1 Query: 175 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 MF L Y+ FL++ S++P LA S VL P N+G + ++YESG+EP+G AW+QF IRYYMFALVFV+FDVETVFLYPWA++F LGV FIEA IF+ ILIVGLVYAWRKGALEWS Sbjct: 1 MFALSGYEYLLGFLLLCSLVPALALSASKVLRPSNQGAVRRTTYESGMEPVGGAWIQFNIRYYMFALVFVIFDVETVFLYPWAVAFHKLGVLAFIEALIFIAILIVGLVYAWRKGALEWS 120
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_PAUCH (NAD(P)H-quinone oxidoreductase subunit 3, organellar chromatophore OS=Paulinella chromatophora GN=ndhC PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.043e-39 Identity = 74/120 (61.67%), Postives = 96/120 (80.00%), Query Frame = 1 Query: 175 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 MF+L YD F FL+I++ +P+LA L + +LAP ++ E+ +YESG+EP+G AW+QF IRYYMFALVFV+FDVETVFLYPWA++F LG+ FIEA IF+ IL++ L YAWRKGALEWS Sbjct: 1 MFVLSGYDAFLGFLLIATAVPVLALLTNKILAPKSRNGERELTYESGMEPVGGAWIQFNIRYYMFALVFVIFDVETVFLYPWAVAFHRLGLLAFIEALIFIAILVIALAYAWRKGALEWS 120 The following BLAST results are available for this feature:
BLAST of CX287253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 441
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287253 ID=CX287253; Name=CX287253; organism=Citrus clementina; type=EST; length=587bpback to top |