CX287253
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_PROM3 (NAD(P)H-quinone oxidoreductase subunit 3 OS=Prochlorococcus marinus (strain MIT 9303) GN=ndhC PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 1.779e-39 Identity = 76/122 (62.30%), Postives = 97/122 (79.51%), Query Frame = 1 Query: 169 LAMFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 L+MF L YD F FL++S+ +PILA + + +LAP ++ E+ +YESG+EP+G AW+QF IRYYMFALVFV+FDVETVFLYPWA++F LG+ FIEA IF+ IL+V L YAWRKGALEWS Sbjct: 13 LSMFALPGYDAFLGFLLVSAAVPILALVTNKLLAPRSRTGERELTYESGMEPIGGAWIQFNIRYYMFALVFVIFDVETVFLYPWAVAFHRLGLLAFIEALIFIAILLVALAYAWRKGALEWS 134
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_PROM2 (NAD(P)H-quinone oxidoreductase subunit 3 OS=Prochlorococcus marinus (strain MIT 9215) GN=ndhC PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 3.034e-39 Identity = 73/120 (60.83%), Postives = 96/120 (80.00%), Query Frame = 1 Query: 175 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 MFLL Y+ F FL+I++ +PILA + + ++AP + E+ +YESG+EP+G AW+QF IRYYMFALVFV+FDVETVFLYPWA++F+ LG+ FIEA IF+ IL++ L YAWRKGALEWS Sbjct: 1 MFLLSGYEYFLGFLLIAAAVPILALVTNLIVAPKGRNGERKLTYESGMEPIGGAWIQFNIRYYMFALVFVIFDVETVFLYPWAVAFNRLGLLAFIEALIFIAILVIALAYAWRKGALEWS 120
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_MESVI (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Mesostigma viride GN=ndhC PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 3.034e-39 Identity = 75/120 (62.50%), Postives = 93/120 (77.50%), Query Frame = 1 Query: 175 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 MF+L YD F F I++ ++PILA S ++ P G EK +YESGIEPMG+AW+QF IRYYMFAL+FV+FDVET+FLYPWA+ F LG+ F+E IF+ ILI+GLVYAWRKGALEWS Sbjct: 1 MFILEGYDSFVVFFIVACLVPILALSGSKLIRPKLSGIEKKMTYESGIEPMGEAWVQFNIRYYMFALIFVIFDVETLFLYPWAIVFKDLGITAFLETLIFLSILIIGLVYAWRKGALEWS 120
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_GLOVI (NAD(P)H-quinone oxidoreductase subunit 3 OS=Gloeobacter violaceus GN=ndhC PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 3.034e-39 Identity = 73/120 (60.83%), Postives = 96/120 (80.00%), Query Frame = 1 Query: 175 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 MF+L YD FL++S+++P+LA IS ++ P G + ++YESG++P GD+W+QF IRYYMFALVFVVFDVETVFLYPWA++F+ LG+ FIEA IF+ IL+V LVYAWRKGALEW+ Sbjct: 1 MFVLSGYDALLIFLLLSALVPVLALTISYLIRPKGSGAFRTTTYESGVDPRGDSWIQFNIRYYMFALVFVVFDVETVFLYPWAVAFNQLGLLAFIEALIFIAILVVALVYAWRKGALEWT 120
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_SYNS9 (NAD(P)H-quinone oxidoreductase subunit 3 OS=Synechococcus sp. (strain CC9902) GN=ndhC PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 3.962e-39 Identity = 74/120 (61.67%), Postives = 96/120 (80.00%), Query Frame = 1 Query: 175 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 MF L YD F FL+I++ +P+LA + + +LAP ++ E+ +YESG+EP+G AW+QF IRYYMFALVFV+FDVETVFLYPWA++F+ LG+ FIEA IF+ IL+V L YAWRKGALEWS Sbjct: 1 MFALPGYDAFLGFLLIAAAVPVLALVTNKLLAPKSRAGERQLTYESGMEPIGGAWIQFNIRYYMFALVFVIFDVETVFLYPWAVAFNRLGLLAFIEALIFIAILLVALAYAWRKGALEWS 120
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_PROM0 (NAD(P)H-quinone oxidoreductase subunit 3 OS=Prochlorococcus marinus (strain MIT 9301) GN=ndhC PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 3.962e-39 Identity = 72/120 (60.00%), Postives = 96/120 (80.00%), Query Frame = 1 Query: 175 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 MFLL Y+ F FL+I++ +P+LA + + ++AP + E+ +YESG+EP+G AW+QF IRYYMFALVFV+FDVETVFLYPWA++F+ LG+ FIEA IF+ IL++ L YAWRKGALEWS Sbjct: 1 MFLLTGYEYFLGFLLIAAAVPVLALVTNLIVAPKGRAGERRLTYESGMEPIGGAWIQFNIRYYMFALVFVIFDVETVFLYPWAVAFNRLGLLAFIEALIFIAILVIALAYAWRKGALEWS 120
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_SYNPW (NAD(P)H-quinone oxidoreductase subunit 3 OS=Synechococcus sp. (strain WH7803) GN=ndhC PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 5.175e-39 Identity = 74/120 (61.67%), Postives = 96/120 (80.00%), Query Frame = 1 Query: 175 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 MF+L YD F FL+I++ +P+LA + + +LAP ++ E+ +YESG+EP+G AW+QF IRYYMFALVFV+FDVETVFLYPWA++F LG+ FIEA IF+ IL+V L YAWRKGALEWS Sbjct: 1 MFVLPGYDAFLGFLLIAAAVPVLALVTNKLLAPRSQDGERQLTYESGMEPIGGAWIQFNIRYYMFALVFVIFDVETVFLYPWAVAFHRLGLLAFIEALIFIAILVVALAYAWRKGALEWS 120
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_PROMM (NAD(P)H-quinone oxidoreductase subunit 3 OS=Prochlorococcus marinus (strain MIT 9313) GN=ndhC PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 5.175e-39 Identity = 76/120 (63.33%), Postives = 95/120 (79.17%), Query Frame = 1 Query: 175 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 MF L YD F FL+IS+ +PILA + + +LAP ++ E+ +YESG+EP+G AW+QF IRYYMFALVFV+FDVETVFLYPWA++F LG+ FIEA IF+ IL+V L YAWRKGALEWS Sbjct: 1 MFALPGYDAFLGFLLISAAVPILALVTNKLLAPRSRTGERELTYESGMEPIGGAWIQFNIRYYMFALVFVIFDVETVFLYPWAVAFHRLGLLAFIEALIFIAILLVALAYAWRKGALEWS 120
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_PROM9 (NAD(P)H-quinone oxidoreductase subunit 3 OS=Prochlorococcus marinus (strain MIT 9312) GN=ndhC PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 5.175e-39 Identity = 73/120 (60.83%), Postives = 96/120 (80.00%), Query Frame = 1 Query: 175 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 MFLL Y+ F FL+I++ +PILA + + ++AP + E+ +YESG+EP+G AW+QF IRYYMFALVFV+FDVETVFLYPWA++F+ LG+ FIEA IF+ IL++ L YAWRKGALEWS Sbjct: 1 MFLLTGYEYFLGFLLIAAAVPILALVTNLIVAPKGRTGERKLTYESGMEPIGGAWIQFNIRYYMFALVFVIFDVETVFLYPWAVAFNRLGLLAFIEALIFIAILVIALAYAWRKGALEWS 120
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_PROMT (NAD(P)H-quinone oxidoreductase subunit 3 OS=Prochlorococcus marinus (strain NATL2A) GN=ndhC PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 6.758e-39 Identity = 74/120 (61.67%), Postives = 93/120 (77.50%), Query Frame = 1 Query: 175 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 MF L Y+ F FL+IS +PILA + ++AP +K E+ +YESG+EP+G AW+QF IRYYMFALVFV+FDVETVFLYPWA++F LG+ FIEA +F+ IL+V L YAWRKGALEWS Sbjct: 1 MFSLQGYEYFLGFLLISGAVPILALTTNKLIAPKSKAGERQLTYESGMEPIGGAWIQFNIRYYMFALVFVIFDVETVFLYPWAVAFHKLGLLAFIEALVFITILVVALAYAWRKGALEWS 120 The following BLAST results are available for this feature:
BLAST of CX287253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 441
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287253 ID=CX287253; Name=CX287253; organism=Citrus clementina; type=EST; length=587bpback to top |