CX287253
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_THEEB (NAD(P)H-quinone oxidoreductase subunit 3 OS=Thermosynechococcus elongatus (strain BP-1) GN=ndhC PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 4.381e-38 Identity = 75/130 (57.69%), Postives = 99/130 (76.15%), Query Frame = 1 Query: 145 SIFHIHRSLAMFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 +I + + +F+L Y+ F FLII S++P+LA SA+L P + +L++YESG+EP+G AW+QF +RYYMFALVFV+FDVETVFLYPWA++F LG+ FIEA IF+ IL+V LVYAWRK ALEWS Sbjct: 3 AIPRLRDTATVFVLSGYEYFLGFLIICSLVPVLALAASALLRPKSGRMIRLTTYESGMEPIGGAWIQFNVRYYMFALVFVIFDVETVFLYPWAVAFHQLGLLAFIEALIFIAILVVALVYAWRKRALEWS 132
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_PROMP (NAD(P)H-quinone oxidoreductase subunit 3 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=ndhC PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 4.381e-38 Identity = 72/120 (60.00%), Postives = 95/120 (79.17%), Query Frame = 1 Query: 175 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 MF L Y+ F FLII++ +PILA + + +++P + E+ +YESG+EP+G AW+QF IRYYMFALVFV+FDVETVFLYPWA++F+ LG+ FIEA IF+ IL++ L YAWRKGALEWS Sbjct: 1 MFSLPGYEYFLGFLIIAAAVPILALVTNLIVSPKGRTGERKLTYESGMEPIGGAWIQFNIRYYMFALVFVIFDVETVFLYPWAVAFNRLGLLAFIEALIFITILVIALAYAWRKGALEWS 120
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_PROMA (NAD(P)H-quinone oxidoreductase subunit 3 OS=Prochlorococcus marinus GN=ndhC PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 5.721e-38 Identity = 74/120 (61.67%), Postives = 94/120 (78.33%), Query Frame = 1 Query: 175 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 MF L YD F FL+IS+ +P LA + + +++P ++ E+ +YESG+EP+G AW+QF IRYYMFALVFV+FDVETVFLYPWA++F LG+ FIEA IF+ ILIV L YAWRKGALEWS Sbjct: 1 MFTLPGYDAFLGFLLISAAVPALALVTNKLISPKSQPGERELTYESGMEPIGGAWIQFNIRYYMFALVFVIFDVETVFLYPWAVAFHKLGLLAFIEALIFISILIVALAYAWRKGALEWS 120
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NUOA_HERA2 (NADH-quinone oxidoreductase subunit A OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=nuoA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.155e-30 Identity = 57/117 (48.72%), Postives = 82/117 (70.09%), Query Frame = 1 Query: 181 LLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEW 531 +L Y F + + P+L ++SA L P P KLS+YE G+E +GD W+QF+++YY++AL FV+FD+ETVFLYPWA+++ LG+ E +F+ IL +GLVYAW+KGALEW Sbjct: 1 MLTNYAFIGIFALAAITFPLLPLVLSAFLRPNRPTPVKLSTYECGLEAIGDIWVQFKVQYYLYALAFVIFDIETVFLYPWAVAYGQLGLFALFEMVVFLAILTIGLVYAWKKGALEW 117
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NUOA_BACC1 (NADH-quinone oxidoreductase subunit A OS=Bacillus cereus (strain ATCC 10987) GN=nuoA PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 8.281e-29 Identity = 56/113 (49.56%), Postives = 82/113 (72.57%), Query Frame = 1 Query: 193 YDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEW 531 Y I FL++ ++P++A + +L P K ++YESGIEP DA ++F RYY+FAL+FV+FDVET+FLYPWA+++D LG+ IE FIF+++L+VGL YAW+K L+W Sbjct: 9 YMIVLIFLLLGILLPVVALTLGRMLRPSKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAYDKLGLFALIEMFIFVVMLLVGLAYAWKKKVLQW 121
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NUOA_BACWK (NADH-quinone oxidoreductase subunit A OS=Bacillus weihenstephanensis (strain KBAB4) GN=nuoA PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 5.367e-28 Identity = 55/113 (48.67%), Postives = 81/113 (71.68%), Query Frame = 1 Query: 193 YDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEW 531 Y I FL++ ++P++A + +L P K ++YESGIEP DA ++F RYY+FAL+FV+FDVET+FLYPWA+++D LG+ IE IF+++L+VGL YAW+K L+W Sbjct: 9 YMIVLIFLLLGILLPVVALTLGKMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAYDKLGLFALIEMLIFVVMLLVGLAYAWKKKVLQW 121
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NUOA_BACCR (NADH-quinone oxidoreductase subunit A OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=nuoA PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 5.367e-28 Identity = 55/113 (48.67%), Postives = 81/113 (71.68%), Query Frame = 1 Query: 193 YDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEW 531 Y I FL++ ++P++A + +L P K ++YESGIEP DA ++F RYY+FAL+FV+FDVET+FLYPWA+++D LG+ IE IF+++L+VGL YAW+K L+W Sbjct: 9 YMIVLIFLLLGILLPVVALTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAYDKLGLFALIEMLIFVVMLLVGLAYAWKKKVLQW 121
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NUOA_BACHK (NADH-quinone oxidoreductase subunit A OS=Bacillus thuringiensis subsp. konkukian GN=nuoA PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 7.010e-28 Identity = 55/113 (48.67%), Postives = 81/113 (71.68%), Query Frame = 1 Query: 193 YDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEW 531 Y I FL++ ++P++A + +L P K ++YESGIEP DA ++F RYY+FAL+FV+FDVET+FLYPWA+++D LG+ IE IF+++L+VGL YAW+K L+W Sbjct: 9 YMIVLIFLLLGILLPVVALTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAYDDLGLFALIEMLIFVVMLLVGLAYAWKKKVLQW 121
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NUOA_BACCZ (NADH-quinone oxidoreductase subunit A OS=Bacillus cereus (strain ZK / E33L) GN=nuoA PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 7.010e-28 Identity = 55/113 (48.67%), Postives = 81/113 (71.68%), Query Frame = 1 Query: 193 YDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEW 531 Y I FL++ ++P++A + +L P K ++YESGIEP DA ++F RYY+FAL+FV+FDVET+FLYPWA+++D LG+ IE IF+++L+VGL YAW+K L+W Sbjct: 9 YMIVLIFLLLGILLPVVALTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAYDNLGLFALIEMLIFVVMLLVGLAYAWKKKVLQW 121
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NUOA_BACAN (NADH-quinone oxidoreductase subunit A OS=Bacillus anthracis GN=nuoA PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 7.010e-28 Identity = 55/113 (48.67%), Postives = 81/113 (71.68%), Query Frame = 1 Query: 193 YDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEW 531 Y I FL++ ++P++A + +L P K ++YESGIEP DA ++F RYY+FAL+FV+FDVET+FLYPWA+++D LG+ IE IF+++L+VGL YAW+K L+W Sbjct: 9 YMIVLIFLLLGILLPVVALTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAYDNLGLFALIEMLIFVVMLLVGLAYAWKKKVLQW 121 The following BLAST results are available for this feature:
BLAST of CX287253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 441
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287253 ID=CX287253; Name=CX287253; organism=Citrus clementina; type=EST; length=587bpback to top |