CX287253
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NUOA_CHLTE (NADH-quinone oxidoreductase subunit A OS=Chlorobium tepidum GN=nuoA PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.462e-25 Identity = 52/109 (47.71%), Postives = 73/109 (66.97%), Query Frame = 1 Query: 205 WAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEW 531 + FL++ V + +L + +L P PEK S+YE G +G AW++F IR+Y+ AL+F++FDVE VFLYPWA F LG +E IF+ IL++GLVYAW KG L+W Sbjct: 12 FVFLVLGIVFVVGGYLTARMLRPSRPNPEKNSTYECGEHAVGSAWVKFNIRFYVVALIFIIFDVEVVFLYPWATVFKQLGAFALVEVLIFVGILVLGLVYAWVKGDLDW 120
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NUOA_CHLCH (NADH-quinone oxidoreductase subunit A OS=Chlorobium chlorochromatii (strain CaD3) GN=nuoA PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.462e-25 Identity = 53/116 (45.69%), Postives = 75/116 (64.66%), Query Frame = 1 Query: 184 LYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEW 531 L ++ + FL++ + + +L S +L P P+K S+YE G E +G AW++F IR+Y+ AL+F++FDVE VFLYPWA F LG IE +F ILI+GL YAW KG L+W Sbjct: 5 LTQFGSVFVFLLLGVIFVVGGYLTSRLLRPSRPNPQKNSTYECGEEAIGSAWVKFNIRFYVVALIFIIFDVEVVFLYPWATVFKPLGTFALIEVLVFAGILILGLAYAWVKGDLDW 120
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NUOA_MOOTA (NADH-quinone oxidoreductase subunit A OS=Moorella thermoacetica (strain ATCC 39073) GN=nuoA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.909e-25 Identity = 54/119 (45.38%), Postives = 82/119 (68.91%), Query Frame = 1 Query: 181 LLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPE--KLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEW 531 +L +Y I FL+ + + A + +L P K PE KL++YE G++ G W+QF++ Y+++ALVF++FDVETVFLYPWA+ F LG+ F E +F+ IL++GL YAW++GAL+W Sbjct: 2 VLQQYGIIAVFLVGGAATAVAALATNWLLRP-KKPPEGDKLAAYECGLKTQGPTWIQFKVSYFLYALVFLLFDVETVFLYPWAVRFQALGLFAFAEMIVFIGILVLGLWYAWKEGALKW 119
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NUOA_GEOKA (NADH-quinone oxidoreductase subunit A OS=Geobacillus kaustophilus GN=nuoA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.909e-25 Identity = 52/113 (46.02%), Postives = 76/113 (67.26%), Query Frame = 1 Query: 193 YDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEW 531 Y I + FL + ++PI A L P K ++YESG P D+ +QF++RYY+FAL+FV+FD+ETVFLYPWA+ +D LG+ +E IF+++L +GL+YAW+K L W Sbjct: 9 YLIIFVFLCLGVLLPIGALTAGRWLRPHVPSDAKATTYESGNNPFHDSRVQFQVRYYLFALLFVIFDIETVFLYPWAVVYDQLGLFALVEMIIFIVLLAIGLIYAWKKKVLRW 121
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NUOA_CHLP8 (NADH-quinone oxidoreductase subunit A OS=Chlorobaculum parvum (strain NCIB 8327) GN=nuoA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.909e-25 Identity = 53/116 (45.69%), Postives = 75/116 (64.66%), Query Frame = 1 Query: 184 LYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEW 531 L + + FL++ V + +L + +L P EKLS+YE G +G AW++F IR+Y+ AL+F++FDVE VFLYPWA F LG+ +E IF IL++GLVYAW KG L+W Sbjct: 5 LSNFGTVFVFLVLGIVFVVGGYLTARMLRPSRPNEEKLSTYECGEPAVGSAWVKFNIRFYVVALIFIIFDVEVVFLYPWATVFKQLGMFALVEVLIFAGILVLGLVYAWVKGDLDW 120
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NUOA_PROA2 (NADH-quinone oxidoreductase subunit A OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=nuoA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.256e-25 Identity = 52/116 (44.83%), Postives = 76/116 (65.52%), Query Frame = 1 Query: 184 LYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEW 531 L + + FL++ +V + +L + +L P PEKL+ YE G + +G +W++F IR+Y+ AL+F++FDVE VFL+PWA F LG IEA +F ILI+GL YAW KG L+W Sbjct: 5 LSDFGAVFVFLLLGTVFVVGGYLTARLLRPSRPNPEKLAVYECGEDAVGTSWVKFNIRFYVVALIFIIFDVEVVFLFPWATVFKQLGEFALIEALVFAGILIIGLAYAWVKGDLDW 120
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NUOA_CHLPD (NADH-quinone oxidoreductase subunit A OS=Chlorobium phaeobacteroides (strain DSM 266) GN=nuoA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.256e-25 Identity = 54/109 (49.54%), Postives = 72/109 (66.06%), Query Frame = 1 Query: 205 WAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEW 531 +AFL + V +L + +L P P K S+YE G E +G AW++F IR+Y+ AL+F++FDVE VFLYPWA F LGV +E +F ILI+GLVYAW KG L+W Sbjct: 12 FAFLALGIVFVAGGYLTARMLRPSRPNPAKNSTYECGEEAVGSAWVKFNIRFYVVALIFIIFDVEVVFLYPWATVFKSLGVFALVEVLVFAGILILGLVYAWVKGDLDW 120
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NUOA2_CHLT3 (NADH-quinone oxidoreductase subunit A 2 OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=nuoA2 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 9.474e-25 Identity = 54/118 (45.76%), Postives = 76/118 (64.41%), Query Frame = 1 Query: 178 FLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEW 531 + + ++ + FL+ V I ++ S +L P EKL+SYE G E +G AW+QF IR+Y+ AL+F++FDVE +FL+PWA F LG EA IF+ IL +GLVYAW KG L+W Sbjct: 3 YTISEFGKVFLFLLFGVVFVIGGYVSSRMLRPHRPNDEKLTSYECGEEAVGSAWVQFNIRFYVVALIFIIFDVEVLFLFPWATVFKQLGGFALFEAVIFVTILTLGLVYAWVKGDLDW 120
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NUOA_PELPB (NADH-quinone oxidoreductase subunit A OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=nuoA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.616e-24 Identity = 53/109 (48.62%), Postives = 71/109 (65.14%), Query Frame = 1 Query: 205 WAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEW 531 +AFL + V +L + +L P P K S+YE G E +G AW++F IR+Y+ AL+F++FDVE VFLYPWA F LG IEA +F IL++GL YAW KG L+W Sbjct: 12 FAFLALGVVFVAGGYLTARMLRPSRPNPAKNSTYECGEEAVGSAWVKFNIRFYVVALIFIIFDVEVVFLYPWATVFKQLGEFALIEALVFAGILVLGLAYAWVKGDLDW 120
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NUOA_CHLL2 (NADH-quinone oxidoreductase subunit A OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=nuoA PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.111e-24 Identity = 53/109 (48.62%), Postives = 70/109 (64.22%), Query Frame = 1 Query: 205 WAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEW 531 + FL + V +L + +L P PEK S+YE G E +G AW++F IR+Y+ AL+F++FDVE VFLYPWA F LG EA +F ILI+GL YAW KG L+W Sbjct: 12 FVFLALGIVFVAGGYLTARMLRPSRPNPEKNSTYECGEEAVGSAWVKFNIRFYVVALIFIIFDVEVVFLYPWATVFKQLGEFALFEALVFAGILILGLAYAWVKGDLDW 120 The following BLAST results are available for this feature:
BLAST of CX287253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 441
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX287253 ID=CX287253; Name=CX287253; organism=Citrus clementina; type=EST; length=587bpback to top |