CX287253
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NUOA_ACIF5 (NADH-quinone oxidoreductase subunit A OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=nuoA PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.757e-24 Identity = 47/107 (43.93%), Postives = 73/107 (68.22%), Query Frame = 1 Query: 211 FLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEW 531 FL+++ V+ + L+ + L P EKLS YE G E DA ++F +RYY+ A++F++FD+E FL+PWA+ FD +G+ F+ +F+ IL+VG +Y W+KGALEW Sbjct: 11 FLLVALVVGVAPLLMGSSLGPHRPDSEKLSPYECGFEAFEDARMKFDVRYYLVAILFILFDLEIAFLFPWAVVFDQIGMTGFLAMMLFLAILVVGFIYEWKKGALEW 117
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NUOA_PROVI (NADH-quinone oxidoreductase subunit A OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=nuoA PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 4.702e-24 Identity = 52/116 (44.83%), Postives = 74/116 (63.79%), Query Frame = 1 Query: 184 LYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEW 531 L ++ + F ++ V +L + +L P P K S+YE G E +G AW++F IR+Y+ AL+F++FDVE VFL+PWA F LG +EA +F ILI+GLVYAW KG L+W Sbjct: 5 LSEFGNVFVFFLLGVVFVAGGYLTARMLRPSRPNPVKTSTYECGEEAVGSAWVKFNIRFYVVALIFIIFDVEVVFLFPWATVFRQLGSFALVEALVFAGILILGLVYAWVKGDLDW 120
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NUOA_PELLD (NADH-quinone oxidoreductase subunit A OS=Pelodictyon luteolum (strain DSM 273) GN=nuoA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 6.141e-24 Identity = 52/109 (47.71%), Postives = 72/109 (66.06%), Query Frame = 1 Query: 205 WAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEW 531 + FL++ V +L + +L P P K S+YE G E +G +W++F IR+Y+ AL+F++FDVE VFL+PWA F LG IEA +F ILI+GLVYAW KG L+W Sbjct: 12 FVFLLLGVVFVAGGYLTARMLRPSRPNPVKNSTYECGEEAVGSSWVKFNIRFYVVALIFIIFDVEVVFLFPWATVFRQLGSFALIEALVFAGILILGLVYAWVKGDLDW 120
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NUOA_DESRM (NADH-quinone oxidoreductase subunit A OS=Desulfotomaculum reducens (strain MI-1) GN=nuoA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.334e-23 Identity = 47/107 (43.93%), Postives = 74/107 (69.16%), Query Frame = 1 Query: 211 FLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEW 531 F+++ V L S ++ P +K KL +YE G+ G W++F+ +Y+ +AL+FV+FDVE ++LYPWA+SF LG+ I+ F+F+ IL++GL YAW++GALEW Sbjct: 10 FIVVGIVFGAGGMLTSFLIHPRSKNKFKLETYECGLPTEGATWVRFKTQYFTYALMFVIFDVEVIYLYPWAVSFVDLGLAGLIKMFLFIFILVLGLWYAWKEGALEW 116
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NQO7_PARDE (NADH-quinone oxidoreductase subunit 7 OS=Paracoccus denitrificans GN=nqo7 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.334e-23 Identity = 49/119 (41.18%), Postives = 77/119 (64.71%), Query Frame = 1 Query: 178 FLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 +LL +Y FL ++S + I+ L +AV+A N PEK+S+YE G DA ++F +R+Y+ +++F++FD+E FL+PWA+SF L F +F+ +L VG Y W+KGALEW+ Sbjct: 3 YLLQEYLPILVFLGMASALAIVLILAAAVIAVRNPDPEKVSAYECGFNAFDDARMKFDVRFYLVSILFIIFDLEVAFLFPWAVSFASLSDVAFWGLMVFLAVLTVGFAYEWKKGALEWA 121
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NUOA_PELUB (NADH-quinone oxidoreductase subunit A OS=Pelagibacter ubique GN=nuoA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 5.199e-23 Identity = 46/107 (42.99%), Postives = 73/107 (68.22%), Query Frame = 1 Query: 211 FLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEW 531 FLII+ + +++ +L+P + PEKLS+YE G EP D+ ++F +R+Y+ A++F++FD+E FL+PWA+S +G F IF+ IL VG +Y W+KGAL+W Sbjct: 15 FLIIALGLSCAFVVVNLILSPKHPDPEKLSAYECGFEPFEDSRMEFDVRFYLVAILFIIFDLEIAFLFPWAISLGNIGGLGFTSMMIFLFILTVGFIYEWKKGALDW 121
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NUOA_RALEJ (NADH-quinone oxidoreductase subunit A OS=Ralstonia eutropha (strain JMP134) GN=nuoA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 8.868e-23 Identity = 48/107 (44.86%), Postives = 68/107 (63.55%), Query Frame = 1 Query: 211 FLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEW 531 F+I V+ I I +L P P KLS YE G E DA ++F +RYY+ A++F++FD+ET FL+PW ++ +G P FI +F+L IVG VY W+KGAL+W Sbjct: 12 FIIFGVVLGIALMSIGRILGPNKPDPAKLSPYECGFEAFEDARMKFDVRYYLIAILFILFDLETAFLFPWGVALREIGWPGFIAMGVFLLEFIVGFVYIWKKGALDW 118
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NUOA_BACFR (NADH-quinone oxidoreductase subunit A OS=Bacteroides fragilis GN=nuoA PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.158e-22 Identity = 47/111 (42.34%), Postives = 75/111 (67.57%), Query Frame = 1 Query: 214 LIISSVIPILAFL-----ISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEW 531 L++ ++ +AF+ +S ++P + +K +YE GI G +W+QFR+ YY+FA++F++FDVETVFL+PWA+ LG I F+++L++GL YAW+KGALEW Sbjct: 5 LLVVVLLTAIAFVGVVIALSNAISPRSYNAQKFEAYECGIPTRGKSWMQFRVGYYLFAILFLMFDVETVFLFPWAVIARDLGPQGLISILFFLVVLVLGLAYAWKKGALEW 115
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NUOA_BACFN (NADH-quinone oxidoreductase subunit A OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=nuoA PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.158e-22 Identity = 47/111 (42.34%), Postives = 75/111 (67.57%), Query Frame = 1 Query: 214 LIISSVIPILAFL-----ISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEW 531 L++ ++ +AF+ +S ++P + +K +YE GI G +W+QFR+ YY+FA++F++FDVETVFL+PWA+ LG I F+++L++GL YAW+KGALEW Sbjct: 5 LLVVVLLTAIAFVGVVIALSNAISPRSYNAQKFEAYECGIPTRGKSWMQFRVGYYLFAILFLMFDVETVFLFPWAVIARDLGPQGLISILFFLVVLVLGLAYAWKKGALEW 115
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NUOA_RALSO (NADH-quinone oxidoreductase subunit A OS=Ralstonia solanacearum GN=nuoA PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.513e-22 Identity = 46/107 (42.99%), Postives = 69/107 (64.49%), Query Frame = 1 Query: 211 FLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEW 531 F+II + + I +L P N P+KLS YE G E DA ++F +RYY+ A++F++FD+ET FL+PW ++ +G P F +F+L +VG VY W+KGAL+W Sbjct: 12 FIIIGVGLGLALMTIGRILGPNNPDPDKLSPYECGFEAFEDARMKFDVRYYLIAILFILFDLETAFLFPWGVALRDIGWPGFFAMGVFLLEFLVGFVYIWKKGALDW 118 The following BLAST results are available for this feature:
BLAST of CX287253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 441
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287253 ID=CX287253; Name=CX287253; organism=Citrus clementina; type=EST; length=587bpback to top |