CX287253
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3M_STRPU (NADH-ubiquinone oxidoreductase chain 3 OS=Strongylocentrotus purpuratus GN=ND3 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.565e-11 Identity = 38/113 (33.63%), Postives = 61/113 (53.98%), Query Frame = 1 Query: 199 IFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIE-AFIFMLILIVGLVYAWRKGALEWS 534 I + F I +V +L L + L EK S YE G +P+ A L F R+++ A++F++FD+E L+P + + I + +FM+IL +GLV+ W G LEW+ Sbjct: 4 IIFLFSITIAVAVVLG-LAAHALPNRTSDSEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPAASLITPPSTLIPISMVFMVILTLGLVFEWINGGLEWA 115
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3M_PHOVI (NADH-ubiquinone oxidoreductase chain 3 OS=Phoca vitulina GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.565e-11 Identity = 37/109 (33.94%), Postives = 58/109 (53.21%), Query Frame = 1 Query: 214 LIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 L ++ + L LI+ L +N EK S YE G +PMG A L F +++++ A+ F++FD+E L PWA D L + A + + +L L Y W + LEW+ Sbjct: 7 LFTNTALASLLVLIAFWLPQLNTYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASHTDNL-TTMLTMALLLISLLAASLAYEWTEKGLEWT 114
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3M_PERSL (NADH-ubiquinone oxidoreductase chain 3 OS=Peromyscus slevini GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.565e-11 Identity = 34/109 (31.19%), Postives = 60/109 (55.05%), Query Frame = 1 Query: 214 LIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 L ++ + I+ L +N EK + YE G +PM A L F +++++ A+ F++FD+E L PWA+ + + + + AFI + +L +GL Y W + LEW+ Sbjct: 7 LSVNIALSTCLITIAFWLPQLNLYTEKANPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQMNNINT-MMLTAFILVSVLALGLAYEWMQKGLEWT 114
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3M_OCHNU (NADH-ubiquinone oxidoreductase chain 3 OS=Ochrotomys nuttalli GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.565e-11 Identity = 33/109 (30.28%), Postives = 62/109 (56.88%), Query Frame = 1 Query: 214 LIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 + +++++ ++ ++ L +N EK + YE G +PM A L F +++++ A+ F++FD+E L PWA+ + + V A I + IL +GL Y W + LEW+ Sbjct: 7 IAVNTILSLILITVAFWLPQLNIYTEKANPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPIPWAIQTPHINM-VLPTALILLTILALGLAYEWLQKGLEWT 114
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3M_MOUSE (NADH-ubiquinone oxidoreductase chain 3 OS=Mus musculus GN=Mtnd3 PE=3 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 4.565e-11 Identity = 35/112 (31.25%), Postives = 62/112 (55.36%), Query Frame = 1 Query: 205 WAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYP--WAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 + + I+ ++ + L++ L +N EK + YE G +P A L F +++++ A+ F++FD+E L P WA+ + + I AFI + IL +GL Y W + LEW+ Sbjct: 4 YTVIFINILLSLTLILVAFWLPQMNLYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQ-TIKTSTMMIMAFILVTILSLGLAYEWTQKGLEWT 114
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3M_HABLO (NADH-ubiquinone oxidoreductase chain 3 OS=Habromys lophurus GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.565e-11 Identity = 33/109 (30.28%), Postives = 61/109 (55.96%), Query Frame = 1 Query: 214 LIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 L ++ + + I+ L +N EK + YE G +PM A L F +++++ A+ F++FD+E L PWA+ + + + + +FI + +L +GL Y W + LEW+ Sbjct: 7 LSVNIALSMCLITIAFWLPQLNMYTEKANPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQMNNINT-MMLTSFILVSVLALGLAYEWMQKGLEWT 114
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3M_USTMA (NADH-ubiquinone oxidoreductase chain 3 OS=Ustilago maydis GN=ND3 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.962e-11 Identity = 41/110 (37.27%), Postives = 63/110 (57.27%), Query Frame = 1 Query: 199 IFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPM-GDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGAL 525 +F+ F+ I +VI + A L+ AV P + EK++ YE G P+ G F I++Y+ ++F+VFD+E + YP+AM+ F IF L+L VG VY + GAL Sbjct: 6 LFFLFIPILAVILLFANLLLAVHRPDS---EKVTPYECGFSPVYGQTRNPFSIQFYLVGILFLVFDIEILLTYPYAMNLYQTSTYGFWIFVIFFLVLTVGFVYEFGTGAL 112
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3M_LOCMI (NADH-ubiquinone oxidoreductase chain 3 OS=Locusta migratoria GN=ND3 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.962e-11 Identity = 33/109 (30.28%), Postives = 66/109 (60.55%), Query Frame = 1 Query: 214 LIISSVIPILAFLISAVLAPIN-KGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVF-IEAFIFMLILIVGLVYAWRKGALEWS 534 + IS ++P++ L++ L+ + EK S +E G +P + + F I++++ A++F++FDVE + P + + V+ + +F++IL+VGL Y W +GAL+W+ Sbjct: 8 ITISFLLPMIVMLLATTLSKKSINDREKSSPFECGFDPKLN--MPFSIQFFLIAVIFLIFDVEIALILPIVIIMKTSNIMVWTLSTMLFIIILLVGLYYEWNQGALKWA 114
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3M_ASTPE (NADH-ubiquinone oxidoreductase chain 3 OS=Asterina pectinifera GN=ND3 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.962e-11 Identity = 38/115 (33.04%), Postives = 60/115 (52.17%), Query Frame = 1 Query: 211 FLIISSVIPILAFLISAV-------LAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 F ++ + IL FLI+ + L N EK S YE G +P+ A + F R+++ A++F++FD+E L+P S VF LIL VGL++ W +G L+W+ Sbjct: 8 FNFLTLFVSILIFLITTLITFAAHFLPSRNTDSEKSSPYECGFDPLNSARVPFSFRFFLVAILFLLFDLEIALLFPLPFS-------VFFHPIHTPLILTVGLIFEWVQGGLDWA 115
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3M_PERMX (NADH-ubiquinone oxidoreductase chain 3 OS=Peromyscus mexicanus GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.787e-11 Identity = 34/108 (31.48%), Postives = 60/108 (55.56%), Query Frame = 1 Query: 214 LIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGV-PVFIEAFIFMLILIVGLVYAWRKGALEWS 534 + +SS + ++AF L +N EK + YE G +PM A L F +++++ A+ F +FD+E L P + + + + + AFI + +L +GL Y W + LEW+ Sbjct: 11 ITLSSCLIMIAFW----LPQLNLYTEKANPYECGFDPMSSARLPFSMKFFLVAITFFLFDLEIALLLPLPWAIQMYNINTMMLTAFILVSVLALGLAYEWMQKGLEWT 114 The following BLAST results are available for this feature:
BLAST of CX287253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 441
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287253 ID=CX287253; Name=CX287253; organism=Citrus clementina; type=EST; length=587bpback to top |