CX287253
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_NUPAD (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Nuphar advena GN=ndhC PE=3 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 3.567e-56 Identity = 104/120 (86.67%), Postives = 115/120 (95.83%), Query Frame = 1 Query: 175 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 MFLL++YDIFWAFL+ISSVIPILAF+IS VLAPI++GPEKLSSYESGIEP+GDAW+QFRIRYYMFALVFVVFDVETVFLYPWA+SFDVLGV VFIEA IF+LI +VG VYAWRKGALEWS Sbjct: 1 MFLLHEYDIFWAFLMISSVIPILAFIISGVLAPISEGPEKLSSYESGIEPIGDAWIQFRIRYYMFALVFVVFDVETVFLYPWAVSFDVLGVSVFIEALIFVLIPVVGSVYAWRKGALEWS 120
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_WHEAT (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Triticum aestivum GN=ndhC PE=3 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 6.084e-56 Identity = 103/120 (85.83%), Postives = 114/120 (95.00%), Query Frame = 1 Query: 175 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 MFLL++YDIFW FLII+S+IPILAF IS +LAP+++GPEKLSSYESGIEPMG AW+QFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGV VFIEA IF+LIL+VGLVYAWRKGALEWS Sbjct: 1 MFLLHEYDIFWTFLIIASLIPILAFSISGLLAPVSEGPEKLSSYESGIEPMGGAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILVVGLVYAWRKGALEWS 120
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_HORVU (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Hordeum vulgare GN=ndhC PE=3 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 6.084e-56 Identity = 103/120 (85.83%), Postives = 114/120 (95.00%), Query Frame = 1 Query: 175 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 MFLL++YDIFW FLII+S+IPILAF IS +LAP+++GPEKLSSYESGIEPMG AW+QFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGV VFIEA IF+LIL+VGLVYAWRKGALEWS Sbjct: 1 MFLLHEYDIFWTFLIIASLIPILAFSISGLLAPVSEGPEKLSSYESGIEPMGGAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILVVGLVYAWRKGALEWS 120
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_CYCTA (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Cycas taitungensis GN=ndhC PE=3 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 1.832e-52 Identity = 96/120 (80.00%), Postives = 111/120 (92.50%), Query Frame = 1 Query: 175 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 MFLL++Y+ FW FL+ISS++PILAFLIS LAPI++GPEKL+SYESGIE MGDAW+QFRIRYYMFALVFVVFDVETVFLYPWAMSFD+LG+ FIEA IF+LILIVG V+AWR+GALEWS Sbjct: 1 MFLLFEYETFWIFLLISSLMPILAFLISRALAPISEGPEKLTSYESGIEAMGDAWIQFRIRYYMFALVFVVFDVETVFLYPWAMSFDILGISTFIEASIFVLILIVGSVHAWRRGALEWS 120
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_ANGEV (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Angiopteris evecta GN=ndhC PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 6.961e-52 Identity = 93/120 (77.50%), Postives = 109/120 (90.83%), Query Frame = 1 Query: 175 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 MFLL KYD FW FL+I+S+IP+ AF IS +LAP+++GPEKL+SYESGIEPMGDAW+QF+IRYYMFALVFV+FDVETVFLYPWAMSF LG+ FIEA IF+LILI+GL+YAWRKGALEWS Sbjct: 1 MFLLPKYDSFWLFLLIASLIPVSAFSISKILAPVSQGPEKLTSYESGIEPMGDAWIQFQIRYYMFALVFVIFDVETVFLYPWAMSFKELGISAFIEALIFVLILIIGLIYAWRKGALEWS 120
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_CRYJA (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Cryptomeria japonica GN=ndhC PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 2.645e-51 Identity = 96/120 (80.00%), Postives = 107/120 (89.17%), Query Frame = 1 Query: 175 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 M+L +YD FW +L ISS+IPILAF IS LAPI+KG EK +SYESGIEPMGD W+QFRIRYYMFALVFVVFDVETVFLYPWAMSFD+LG+ FIEAFIF++ILIVGLVYAWRKGALEWS Sbjct: 1 MYLFSEYDTFWIYLSISSLIPILAFSISRSLAPISKGAEKATSYESGIEPMGDTWIQFRIRYYMFALVFVVFDVETVFLYPWAMSFDILGLFTFIEAFIFVIILIVGLVYAWRKGALEWS 120
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_ANTFO (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Anthoceros formosae GN=ndhC PE=2 SV=2) HSP 1 Score: 201.445 bits (511), Expect = 2.645e-51 Identity = 91/120 (75.83%), Postives = 107/120 (89.17%), Query Frame = 1 Query: 175 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 MFL+ KY+ FW FL+I+S+IP +AF IS V+API+KGPEK +SYE GIEPMGDAW+QF+IRYYMFALVFV+FDVETVFLYPWAMSF LG+P FIE FIF+ ILI+GL+YAWRKGALEWS Sbjct: 1 MFLVSKYNYFWIFLLIASLIPTIAFSISRVIAPISKGPEKFTSYECGIEPMGDAWIQFQIRYYMFALVFVIFDVETVFLYPWAMSFKQLGIPAFIEVFIFVFILIIGLIYAWRKGALEWS 120
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_PSINU (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Psilotum nudum GN=ndhC PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 3.234e-49 Identity = 90/120 (75.00%), Postives = 106/120 (88.33%), Query Frame = 1 Query: 175 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 MF+L KY FW F++ISS+IP+LA LIS +LAP++KGPEK++SYESGIEPMGDAW+QF+IRYY FALVFV+FDVETVFLYPWAMSF LG+ FIEA IF+ ILI+GLVYAWRK ALEWS Sbjct: 1 MFMLPKYQTFWVFIMISSLIPLLALLISRLLAPVSKGPEKMTSYESGIEPMGDAWIQFQIRYYSFALVFVIFDVETVFLYPWAMSFYELGIFAFIEALIFVFILIIGLVYAWRKRALEWS 120
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_PHYPA (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Physcomitrella patens GN=ndhC PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.605e-48 Identity = 93/121 (76.86%), Postives = 108/121 (89.26%), Query Frame = 1 Query: 175 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPIN-KGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 MFLL KY+ F+ FL+++SVIPILAF IS LAP N +GPEKL+SYESGIEPMGDAW+QF+IRYYMFALVFV+FDVETVFLYPWAMSF+ LG+ FIEA +F+ ILI+GLVYAWRKGALEWS Sbjct: 1 MFLLPKYNSFFIFLLLASVIPILAFSISKFLAPNNTQGPEKLTSYESGIEPMGDAWIQFQIRYYMFALVFVIFDVETVFLYPWAMSFNDLGLSAFIEALVFVFILIIGLVYAWRKGALEWS 121
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_CHAVU (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Chara vulgaris GN=ndhC PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 3.575e-48 Identity = 89/120 (74.17%), Postives = 102/120 (85.00%), Query Frame = 1 Query: 175 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 M L +YD W FL+I+S++PILAF IS +LAPI GPEKL+SYESGIEP G AW+QF IRYYMFALVFVVFDVETVFLYPWA+SF LG+ FIEA +F+LIL+VGLVYAWRKGALEWS Sbjct: 1 MGTLQEYDYLWFFLVIASIVPILAFTISEILAPIRSGPEKLTSYESGIEPKGQAWIQFHIRYYMFALVFVVFDVETVFLYPWAISFHSLGISAFIEALLFILILMVGLVYAWRKGALEWS 120 The following BLAST results are available for this feature:
BLAST of CX287253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 441
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287253 ID=CX287253; Name=CX287253; organism=Citrus clementina; type=EST; length=587bpback to top |