CX287253
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_MARPO (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Marchantia polymorpha GN=ndhC PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 4.371e-46 Identity = 89/120 (74.17%), Postives = 101/120 (84.17%), Query Frame = 1 Query: 175 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 MFLL KYD F+ FL+I S IL F +S +APINKGPEK +SYESGIEPMG+A +QF+IRYYMFALVFV+FDVETVFLYPWAMSF G+ FIEA IF+LILI+GLVYAWRKGALEWS Sbjct: 1 MFLLQKYDYFFVFLLIISFFSILIFSLSKWIAPINKGPEKFTSYESGIEPMGEACIQFQIRYYMFALVFVIFDVETVFLYPWAMSFYNFGISSFIEALIFILILIIGLVYAWRKGALEWS 120
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_ZYGCR (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Zygnema circumcarinatum GN=ndhC PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 9.736e-46 Identity = 84/120 (70.00%), Postives = 104/120 (86.67%), Query Frame = 1 Query: 175 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 M+ L Y+ FWAFL+I+S++P+LA S+++AP +K EK +SYESGIEPMG++W+QF+IRYYMFALVFVVFDVETVFLYPWAMSF LGV FIEA +F+L+LI+GLVYAWRKGALEWS Sbjct: 1 MYTLAGYESFWAFLLIASLVPVLAVGTSSLVAPSSKAAEKRTSYESGIEPMGESWIQFQIRYYMFALVFVVFDVETVFLYPWAMSFQQLGVLAFIEALVFVLVLIIGLVYAWRKGALEWS 120
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_CHAGL (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Chaetosphaeridium globosum GN=ndhC PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 9.736e-46 Identity = 86/120 (71.67%), Postives = 100/120 (83.33%), Query Frame = 1 Query: 175 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 M + KY FW FLII ++IP LAF S +LAP PEK +SYESGIEP+G+AW+QF+IRYYMFALVFV+FDVET+FLYPWAMSFD LGV FIEA IF+LIL++GLVYAWRKGALEWS Sbjct: 1 MIVFSKYKTFWFFLIIGAIIPTLAFTTSKLLAPTVTTPEKKTSYESGIEPIGEAWIQFQIRYYMFALVFVIFDVETIFLYPWAMSFDQLGVYGFIEALIFVLILVIGLVYAWRKGALEWS 120
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_STAPU (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Staurastrum punctulatum GN=ndhC PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 2.398e-44 Identity = 81/121 (66.94%), Postives = 104/121 (85.95%), Query Frame = 1 Query: 175 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAP-INKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 M +L KY+ FWAFL+I+ +IP+LA +S ++AP +K PEK ++YESGIEPMG++W+QF+IRYYMFALVFV+FDVETVFLYPWAMSFD LG+ F E +F++ILI+GL+YAWRKGALEWS Sbjct: 1 MPILPKYESFWAFLLIACLIPVLAISVSNLVAPSTSKNPEKSTTYESGIEPMGESWIQFQIRYYMFALVFVIFDVETVFLYPWAMSFDDLGIIAFAEVLVFVIILIIGLIYAWRKGALEWS 121
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_ADICA (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Adiantum capillus-veneris GN=ndhC PE=2 SV=2) HSP 1 Score: 174.866 bits (442), Expect = 2.652e-43 Identity = 80/119 (67.23%), Postives = 96/119 (80.67%), Query Frame = 1 Query: 175 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEW 531 MFL ++YD FW FL++ IP+LAF I+ AP +GPEK +SYESGIEP GD W++F+IRYYMFALVF VFDVETVFLYPWA SF+ LG+ F+E +F+ ILIVGLVYAWRKGALEW Sbjct: 1 MFLSHQYDSFWIFLLVCISIPLLAFSITRFAAPPREGPEKSTSYESGIEPKGDTWIRFQIRYYMFALVFTVFDVETVFLYPWATSFEELGLFAFVEVIVFIFILIVGLVYAWRKGALEW 119
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_CHLAT (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Chlorokybus atmophyticus GN=ndhC PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 6.531e-42 Identity = 81/120 (67.50%), Postives = 97/120 (80.83%), Query Frame = 1 Query: 175 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 MF+L YD F FLII+ +IP+LA S ++ P GPEK ++YESGIEPMG+AW+QF IRYYMFALVFV+FDVETVFLYPWA+SF +G F+EA +F+ ILIVGLVYAWRKGALEWS Sbjct: 1 MFILKGYDSFLVFLIIACLIPVLALSASKLVRPKFGGPEKYTTYESGIEPMGEAWVQFNIRYYMFALVFVIFDVETVFLYPWAVSFAQMGFISFLEALVFLSILIVGLVYAWRKGALEWS 120
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_SYNP2 (NAD(P)H-quinone oxidoreductase subunit 3 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=ndhC PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.114e-41 Identity = 78/120 (65.00%), Postives = 98/120 (81.67%), Query Frame = 1 Query: 175 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 MF+L Y+ F FLI+SS++PILA S +L P GPE+ ++YESG+EP+G AW+QF IRYYMFALVFVVFDVETVFLYPWA++F+ LG+ F+EA IF+ IL++ LVYAWRKGALEWS Sbjct: 1 MFVLSGYEYFLGFLIVSSLVPILALTASKLLRPKGGGPERKTTYESGMEPIGGAWIQFNIRYYMFALVFVVFDVETVFLYPWAVAFNQLGLLAFVEALIFIAILVIALVYAWRKGALEWS 120
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_TRIEI (NAD(P)H-quinone oxidoreductase subunit 3 OS=Trichodesmium erythraeum (strain IMS101) GN=ndhC PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.455e-41 Identity = 78/122 (63.93%), Postives = 98/122 (80.33%), Query Frame = 1 Query: 169 LAMFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 L +F L Y+ F FL+ISS++PI+A S +L P +GPE+ ++YESG+EP+G AW+QF IRYYMFALVFV+FDVETVFLYPWA++F LG+ FIEA IF+ IL+V LVYAWRKGALEWS Sbjct: 14 LIVFFLSGYEYFLGFLMISSLVPIIALTASKLLRPKTRGPERRTTYESGVEPIGGAWIQFNIRYYMFALVFVIFDVETVFLYPWAVAFHQLGLLAFIEALIFIAILVVALVYAWRKGALEWS 135
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_SYNY3 (NAD(P)H-quinone oxidoreductase subunit 3 OS=Synechocystis sp. (strain PCC 6803) GN=ndhC PE=1 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 7.221e-41 Identity = 77/120 (64.17%), Postives = 97/120 (80.83%), Query Frame = 1 Query: 175 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 MF+L Y+ F FL I S++P+LA S +L P + GPE+ ++YESG+EP+G AW+QF IRYYMFALVFVVFDVETVFLYPWA++F+ LG+ F+EA IF+ IL+V LVYAWRKGALEWS Sbjct: 1 MFVLTGYEYFLGFLFICSLVPVLALTASKLLRPRDGGPERQTTYESGMEPIGGAWIQFNIRYYMFALVFVVFDVETVFLYPWAVAFNQLGLLAFVEALIFIAILVVALVYAWRKGALEWS 120
BLAST of CX287253 vs. ExPASy Swiss-Prot
Match: NU3C_MICAN (NAD(P)H-quinone oxidoreductase subunit 3 OS=Microcystis aeruginosa (strain NIES-843) GN=ndhC PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.232e-40 Identity = 77/120 (64.17%), Postives = 96/120 (80.00%), Query Frame = 1 Query: 175 MFLLYKYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 534 MF+L Y+ F FL+ S++PIL+ S VL P GPE+ ++YESG+EP+G AW+QF IRYYMFALVFVVFDVETVFLYPWA++F+ LG+ F+EA IF+ IL+V LVYAWRKGALEWS Sbjct: 1 MFVLKGYEYFLGFLLACSLVPILSLTASKVLRPSGGGPERRTTYESGMEPIGGAWIQFNIRYYMFALVFVVFDVETVFLYPWAVAFNQLGLLAFVEALIFIAILVVALVYAWRKGALEWS 120 The following BLAST results are available for this feature:
BLAST of CX287253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 441
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287253 ID=CX287253; Name=CX287253; organism=Citrus clementina; type=EST; length=587bpback to top |