CX287254
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: HECD1_HUMAN (E3 ubiquitin-protein ligase HECTD1 OS=Homo sapiens GN=HECTD1 PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 3.889e-14 Identity = 51/153 (33.33%), Postives = 81/153 (52.94%), Query Frame = 1 Query: 25 TAIRPQINAFLEGFTELIPGELISIFNDKELELLISG--LPDIDLDDMRANTEYS-GYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHE 474 T I+ Q+ AF +GF ++ P E +S F+ +E+++++ G P +D+ TE GY+ SP F V+ G S +++ LQF TG S +P G + L + + K + PS +TC + L LPEY S++ + ERLL A E Sbjct: 2458 TGIQKQMEAFRDGFNKVFPMEKLSSFSHEEVQMILCGNQSPSWAAEDIINYTEPKLGYTRDSPGFLRFVRVLCGMSSDERKAFLQFTTGCSTLPPGGLANLH----PRLTVVRKVDATDASYPSVNTCVHYLKLPEYSSEEIMRERLLAATME 2606
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: HYD_DROME (E3 ubiquitin-protein ligase hyd OS=Drosophila melanogaster GN=hyd PE=1 SV=3) HSP 1 Score: 77.0258 bits (188), Expect = 5.079e-14 Identity = 49/167 (29.34%), Postives = 88/167 (52.69%), Query Frame = 1 Query: 10 EHRLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYSGYSAASP-----VIQWFWEVVQGFSKEDKARLLQFVTGTSKVPL--EGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEGNEGF 489 E+RL + + A +G +++P + ++L LL++G+ DI++ + + T ++ S+ P +WFW +V+ + ++ L+ F TG+ +P EGF L ++ I A S HLP+A+TC ++L +P Y SK L ++L+AI N GF Sbjct: 2726 EYRLIKSQEKALEALKDGVFDVLPDNSMINLTAEDLRLLLNGVGDINVSTLISYTTFNDESSEGPDKLLKFKKWFWSIVEKMNIMERQDLVYFWTGSPALPASEEGFQPLPSVT------IRPADDS--HLPTANTCISRLYIPLYSSKSILRSKMLMAIKSKNFGF 2884
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: HERC6_HUMAN (Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6 PE=2 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 1.930e-13 Identity = 45/161 (27.95%), Postives = 79/161 (49.07%), Query Frame = 1 Query: 10 EHRLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYS-GYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEGNEGF 489 ++ +++ F GF + E++ F +EL I G D D N++Y GY + P IQ FW+ + ++K + L F+TG ++ G ++ + F+ + + DH P++ TC N L LP+Y + + +EE L +AI+ N GF Sbjct: 861 DYIFNVSVKAVYEEFQRGFYRVCEKEILRHFYPEELMTAIIGNTDYDWKQFEQNSKYEQGYQKSHPTIQLFWKAFHKLTLDEKKKFLFFLTGRDRLHARGIQKMEIV-----FRCPETFSERDH-PTSITCHNILSLPKYSTMERMEEALQVAIN-NNRGF 1014
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: UPL3_ARATH (E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana GN=UPL3 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.134e-12 Identity = 50/180 (27.78%), Postives = 86/180 (47.78%), Query Frame = 1 Query: 1 VVAEHRLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDI-DLDDMRANTEYS-GYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSI---------------DHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEGNEGF 489 +V + + + QI AF GF ++ + IF EL+ L+ G ++ +++ + + ++ GY+A SP I E++ + + + QFVTG ++P G + L + K I + + S D LPS TC N L LP Y +K+ + ++LL AI+EG F Sbjct: 1711 LVVDATVKRGVTRQIEAFRSGFNQVFDITSLQIFTPSELDYLLCGRRELWEVETLAEHIKFDHGYNAKSPAIINLLEIMGELTADQQRAFCQFVTGAPRLPPGGLAVL-----NPKLTIVRKHSSTSSAAANGAGASETADDDLPSVMTCANYLKLPPYSTKEIMYKKLLYAINEGQGSF 1885
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: HERC5_HUMAN (Probable E3 ubiquitin-protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.787e-12 Identity = 45/156 (28.85%), Postives = 82/156 (52.56%), Query Frame = 1 Query: 28 AIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYS-GYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEGNEGFG 492 +++ F GF ++ ++I +F+ +EL+ +I G D D N Y GY+++ P I FW+ + E+K + L F+TGT ++ ++ + ++ F +++ D + A TCF+ L LP+Y + + +EE L AI+ N GFG Sbjct: 876 SVKAVYEEFRRGFYKMCDEDIIKLFHPEELKDVIVGNTDYDWKTFEKNARYEPGYNSSHPTIVMFWKAFHKLTLEEKKKFLVFLTGTDRLQMKDLNNMK-----ITFCCPESWNERDPI-RALTCFSVLFLPKYSTMETVEEALQEAIN-NNRGFG 1024 The following BLAST results are available for this feature:
BLAST of CX287254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287254 ID=CX287254; Name=CX287254; organism=Citrus clementina; type=EST; length=493bpback to top |