Homology
BLAST of CX287277 vs. ExPASy Swiss-Prot
Match:
RBS_LACSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1)
HSP 1 Score: 288.5 bits (737), Expect = 1.416e-77
Identity = 130/169 (76.92%), Postives = 149/169 (88.17%), Query Frame = 1
Query: 40 ISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISF 546
ISS+ +AT NR + QAS+ APFTGLKS+ AFP TKK NND +S+ SNGGRVQCMKVWPP GLKK+ETLSYLPPLSDEAL KEI YL+R+ WIPCLEFELE G+VYREHH SPGYYDGRYWTMWKLPM+GCTD+ QV+KEVGE +KEYP++F+R+IGFDN RQVQCISF
Sbjct: 4 ISSSAIATVNRTTSTQASLAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDNIRQVQCISF 172
BLAST of CX287277 vs. ExPASy Swiss-Prot
Match:
RBS_FAGCR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Fagus crenata GN=RBCS1 PE=2 SV=1)
HSP 1 Score: 287.73 bits (735), Expect = 2.416e-77
Identity = 136/174 (78.16%), Postives = 154/174 (88.51%), Query Frame = 1
Query: 25 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISF 546
MASSMISS TVAT +RA+ AQA+MVAPFTGLKS++AFPAT+K+NNDITS+ASNGGRVQCMKVWPP GL+KFETLSYLPPLS E+L K+I YL+ GWIPCLEFELE +VYRE++ SPGYYDGRYW MWKLPM+GCTDATQVL E+ E K YP S +RIIGFDNKRQVQCISF
Sbjct: 1 MASSMISSATVATVSRATPAQATMVAPFTGLKSTAAFPATRKSNNDITSLASNGGRVQCMKVWPPLGLQKFETLSYLPPLSIESLAKQIEYLILKGWIPCLEFELEHPFVYRENNRSPGYYDGRYWVMWKLPMFGCTDATQVLAELQEASKTYPTSHIRIIGFDNKRQVQCISF 174
BLAST of CX287277 vs. ExPASy Swiss-Prot
Match:
RBS_PYRPY (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1)
HSP 1 Score: 284.648 bits (727), Expect = 2.045e-76
Identity = 138/176 (78.41%), Postives = 154/176 (87.50%), Query Frame = 1
Query: 25 MASSMISSTTVAT--ANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISF 546
MASSMISS TVAT A+R + AQA MVAPF GLKSSSAFP T+K+N DITSIASNGGRVQCM+VWPP GLKKFETLSYLPPLS E+L KE+ YLLR W+PCLEFELE G+VYRE+H SPGYYDGRYWTMWKLPM+GCTD++QVLKE+ E +K YP SF+RIIGFDN RQVQCISF
Sbjct: 1 MASSMISSGTVATVSADRPAPAQARMVAPFNGLKSSSAFPVTRKSN-DITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSESLAKEVDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISF 175
BLAST of CX287277 vs. ExPASy Swiss-Prot
Match:
RBS_MEDSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Medicago sativa PE=2 SV=1)
HSP 1 Score: 284.263 bits (726), Expect = 2.671e-76
Identity = 129/171 (75.44%), Postives = 150/171 (87.72%), Query Frame = 1
Query: 34 SMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISF 546
++ISS V T NRAS AQA++VAPFTGLKSS+ FP TKKTNNDITSIASNGGRV CM+VWPP G KKFETLSYLPPL++E L KE+ YL+R GWIPCLEFELEKG+VYRE+H SPGYYDGRYWTMW+LP++G TD++QVLKE+ + + EYP SF+RIIGFDN RQVQCISF
Sbjct: 2 ALISSAAVTTVNRASSAQANLVAPFTGLKSSAGFPVTKKTNNDITSIASNGGRVNCMQVWPPVGKKKFETLSYLPPLTEEQLAKEVEYLIRKGWIPCLEFELEKGFVYRENHRSPGYYDGRYWTMWRLPLFGATDSSQVLKELADCKAEYPDSFIRIIGFDNVRQVQCISF 172
BLAST of CX287277 vs. ExPASy Swiss-Prot
Match:
RBS_BETVE (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1)
HSP 1 Score: 283.878 bits (725), Expect = 3.488e-76
Identity = 136/174 (78.16%), Postives = 151/174 (86.78%), Query Frame = 1
Query: 25 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISF 546
MA SMISS TVA +RAS AQ+SMVAPFT LKS+SAFP T+KTNNDITSIASNGGRVQCM+VWPP GLKKFETLSYLPPLS E L KE+ YLLR IPCLEFELE G+VYREH+ SPGYYDGRYWTMWKLPM+GC D++QVLKE+ E +K YP +F+RIIGFDNKRQVQ ISF
Sbjct: 1 MACSMISSATVAAVSRASPAQSSMVAPFTCLKSTSAFPVTQKTNNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELEECKKAYPSAFIRIIGFDNKRQVQIISF 174
BLAST of CX287277 vs. ExPASy Swiss-Prot
Match:
RBS_MALSP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Malus sp. GN=RBCS PE=2 SV=1)
HSP 1 Score: 283.108 bits (723), Expect = 5.950e-76
Identity = 138/176 (78.41%), Postives = 154/176 (87.50%), Query Frame = 1
Query: 25 MASSMISSTTVAT--ANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISF 546
MASSMISS TVAT A+R + AQA MVAPFTGLKSSSA P T+K+N DITSIASNGGRVQCM+VWPP GLKKFETLSYLPPLS E+L KE+ YLLR W+PCLEFELE G+VYRE+H SPGYYDGRYWTMWKLPM+GCTD++QVLKE+ E +K YP SF+RIIGFDN RQVQCISF
Sbjct: 1 MASSMISSGTVATVSADRPAPAQARMVAPFTGLKSSSASPVTRKSN-DITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEFELEHGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISF 175
BLAST of CX287277 vs. ExPASy Swiss-Prot
Match:
RBS_HEVBR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Hevea brasiliensis GN=RBCS PE=2 SV=1)
HSP 1 Score: 278.87 bits (712), Expect = 1.122e-74
Identity = 132/174 (75.86%), Postives = 147/174 (84.48%), Query Frame = 1
Query: 25 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISF 546
MASSM+S+ VA NRAS AQASMVAPFTGLKS+SAFP T+KT DITSIASNGGRVQCM+VWPP G K +ETLSYLPPL+ E L KE+ YLLR GW+PCLEFELE G VYRE+H SPGYYDGRYWTMWKLPM+GCTDA QVL+E+ E+ K YP + RIIGFDN RQVQCISF
Sbjct: 1 MASSMLSTAAVACINRASPAQASMVAPFTGLKSTSAFPTTRKTTTDITSIASNGGRVQCMQVWPPRGKKFYETLSYLPPLTREQLAKEVEYLLRKGWVPCLEFELEHGTVYREYHRSPGYYDGRYWTMWKLPMFGCTDAVQVLQELDEMIKAYPDCYGRIIGFDNVRQVQCISF 174
BLAST of CX287277 vs. ExPASy Swiss-Prot
Match:
RBS3_SOLTU (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Solanum tuberosum GN=RBCS-3 PE=3 SV=1)
HSP 1 Score: 277.715 bits (709), Expect = 2.500e-74
Identity = 130/175 (74.29%), Postives = 154/175 (88.00%), Query Frame = 1
Query: 25 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNN-DITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISF 546
MASS++SS VAT R+++AQASMVAPFTGLKS+++FP TKK NN DITS+ASNGGRV+CM+VWPP +KK+ETLSYLP LSDE LLKE+ YLL++GW+PCLEFE E G+VYRE+H SPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K YP +++RIIGFDN RQVQCISF
Sbjct: 1 MASSIVSSAAVAT--RSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWIRIIGFDNVRQVQCISF 173
BLAST of CX287277 vs. ExPASy Swiss-Prot
Match:
RBS_MANES (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Manihot esculenta PE=2 SV=1)
HSP 1 Score: 277.33 bits (708), Expect = 3.265e-74
Identity = 130/174 (74.71%), Postives = 146/174 (83.91%), Query Frame = 1
Query: 25 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISF 546
MASSM+S+ TVA+ NR S AQA+MVAPFTGLKS+ FP T+KTN+DITSI SNGG+VQCMKVWP G+KKFETLSYLPPL+ E L E+ YLLRSGWIPCLEFELE G VYREH PGYYDGRYWTMWKLPM+GCTDA QVLKE+ E+ K +P + RIIGFDN RQVQCISF
Sbjct: 1 MASSMLSTATVASINRVSPAQATMVAPFTGLKSTPVFPTTRKTNSDITSITSNGGKVQCMKVWPTLGMKKFETLSYLPPLTREQLASEVEYLLRSGWIPCLEFELEHGLVYREHARVPGYYDGRYWTMWKLPMFGCTDAAQVLKELDELIKHHPDGYARIIGFDNVRQVQCISF 174
BLAST of CX287277 vs. ExPASy Swiss-Prot
Match:
RBS8_NICPL (Ribulose bisphosphate carboxylase small chain 8B, chloroplastic OS=Nicotiana plumbaginifolia GN=RBCS-8B PE=3 SV=1)
HSP 1 Score: 276.174 bits (705), Expect = 7.274e-74
Identity = 130/174 (74.71%), Postives = 151/174 (86.78%), Query Frame = 1
Query: 25 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISF 546
MASS++SS VAT R+++AQA+MVAPFTGLKS+++FP ++K N DITSIASNGGRVQCM+VWPP KK+ETLSYLP LS E LL EI YLL+SGW+PCLEFE E+G+VYREHH SPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K YP ++VRIIGFDN RQVQCISF
Sbjct: 1 MASSVLSSAAVAT--RSNVAQANMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQCMQVWPPINKKKYETLSYLPDLSQEQLLSEIEYLLKSGWVPCLEFETERGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWVRIIGFDNVRQVQCISF 172
The following BLAST results are available for this feature:
BLAST of CX287277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (
BLAST: Citrus ESTs to SwissProt )
Total hits: 127
50 100 150 200 250 300 350 400 450 500 Expect = 1.42e-77 / Id = 76.92 Expect = 2.42e-77 / Id = 78.16 Expect = 2.05e-76 / Id = 78.41 Expect = 2.67e-76 / Id = 75.44 Expect = 3.49e-76 / Id = 78.16 Expect = 5.95e-76 / Id = 78.41 Expect = 1.12e-74 / Id = 75.86 Expect = 2.50e-74 / Id = 74.29 Expect = 3.26e-74 / Id = 74.71 Expect = 7.27e-74 / Id = 74.71 Sequence RBS_LACSA RBS_FAGCR RBS_PYRPY RBS_MEDSA RBS_BETVE RBS_MALSP RBS_HEVBR RBS3_SOLTU RBS_MANES RBS8_NICPL
Match Name E-value Identity Description
RBS_LACSA 1.416e-77 76.92 Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS_FAGCR 2.416e-77 78.16 Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS_PYRPY 2.045e-76 78.41 Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS_MEDSA 2.671e-76 75.44 Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS_BETVE 3.488e-76 78.16 Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS_MALSP 5.950e-76 78.41 Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS_HEVBR 1.122e-74 75.86 Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS3_SOLTU 2.500e-74 74.29 Ribulose bisphosphate carboxylase small chain 3, c... [more]
RBS_MANES 3.265e-74 74.71 Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS8_NICPL 7.274e-74 74.71 Ribulose bisphosphate carboxylase small chain 8B, ... [more]
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