CX287280

Overview
NameCX287280
Unique NameCX287280
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length581
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CYSP2_LEIPI (Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS2 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.127e-29
Identity = 80/198 (40.40%), Postives = 117/198 (59.09%), Query Frame = 1
Query:    1 AENRTYKVGLNRFADLTNEEYRSMYL-GARF--GAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIID--NGGIDTEDDYPYKAIDG---SCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVA-NQPVSVAIE 567
            A N   + G+ +F DL+  E+ + YL GA +   AKR + +  R  R       A+PD+VDWR+KGAV  VKDQG+CGSCWAFS +  +EG   +    L+SLSEQ+LV CD   N+GC+GGLM  AF++++   NG + TED YPY + +G    C    +   V    D   +  + EKA+   +A N P+++A++
Sbjct:   74 ARNPHAQFGITKFFDLSEAEFAARYLNGAAYFAAAKRHAAQHYRKAR---ADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCD-DMNDGCDGGLMLQAFDWLLQNTNGHLHTEDSYPYVSGNGYVPECSNSSEELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALD 267          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CATL2_PARTE (Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT00022898001 PE=3 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 2.778e-29
Identity = 79/191 (41.36%), Postives = 109/191 (57.07%), Query Frame = 1
Query:    4 ENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDW--RKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIE 567
            E+ TY + LN+FAD++ +E+ S YL  R    +T+  +  +  +  +  E     VDW   KK     VK+QGSCGSCWAFS + A+E    I       LSEQ+LVDC   Y NEGCNGG MD AFE++ DNG  + + DYPY A DG+C T  K      +  + D+   DE  L +A+  + VSVA++
Sbjct:   65 ESATYTLELNQFADMSQQEFASTYLSLR--VPKTAKLNASNANFQYKGAE-----VDWTDNKKVKYPAVKNQGSCGSCWAFSAVGALEINTDIELNKKYELSEQDLVDCSGPYDNEGCNGGWMDSAFEYVADNGLAEAK-DYPYTAKDGTCKTSVKR-PYTHVQGFTDIDSCDE--LAQAIQERTVSVAVD 244          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: TEST2_RAT (Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 4.739e-29
Identity = 74/187 (39.57%), Postives = 106/187 (56.68%), Query Frame = 1
Query:   16 YKVGLNRFADLTNEEYRSMYLG-ARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDC-DTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIE 567
            + + +N F DLTN E+  M  G  R   K+T +       Y+P+        VDWR+ G V  VK+QG C S WAFS   ++EG     T  LI LSEQ L+DC  ++   GC+GG M YAF+++ DNGG+ TE+ YPY+     C  + +N+    + D+  +P   E+AL KAVA   P+SVA++
Sbjct:   73 FTMAMNAFGDLTNIEFVKMMTGFQRQKIKKTHIFQDHQFLYVPK-------RVDWRQLGYVTPVKNQGHCASSWAFSATGSLEGQMFRKTERLIPLSEQNLLDCMGSNVTHGCSGGFMQYAFQYVKDNGGLATEESYPYRGQGRECRYHAENS-AANVRDFVQIP-GSEEALMKAVAKVGPISVAVD 250          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: BROM2_ANACO (Stem bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.379e-28
Identity = 67/139 (48.20%), Postives = 88/139 (63.31%), Query Frame = 1
Query:  154 ALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYR-KNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIE 567
            A+P S+DWR  GAV  VK+Q  CG+CWAF+ IA VE I KI  G L  LSEQ+++DC   Y  GC GG    AFEFII N G+ +   YPYKA  G+C T    N+  +T   Y  VP N+E ++  AV+ QP++VA++
Sbjct:    1 AVPQSIDWRDYGAVTSVKNQNPCGACWAFAAIATVESIYKIKKGILEPLSEQQVLDCAKGY--GCKGGWEFRAFEFIISNKGVASGAIYPYKAAKGTCKTDGVPNSAYIT--GYARVPRNNESSMMYAVSKQPITVAVD 135          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: ACP1_ENTHI (Cysteine proteinase ACP1 OS=Entamoeba histolytica GN=ACP1 PE=1 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 1.379e-28
Identity = 77/182 (42.31%), Postives = 103/182 (56.59%), Query Frame = 1
Query:   28 LNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEG-INKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVA-NQPVSVAIE 567
            LN FAD+T+EE+   +LG  +    T+   K + +       A P+SVDWR    +   KDQG CGSCW F T A +EG +NK + G L S SEQ+LVDCD S N GC GG    + +FI +N G+  E DYPYKA+ G+C   +K   V T+     V    E  LQ  +A N PV+V ++
Sbjct:   57 LNVFADMTHEEFIQTHLGMTYEVPETTSNVKAAVK-------AAPESVDWRS--IMNPAKDQGQCGSCWTFCTTAVLEGRVNKDL-GKLYSFSEQQLVDCDASDN-GCEGGHPSNSLKFIQENNGLGLESDYPYKAVAGTC---KKVKNVATVTGSRRVTDGSETGLQTIIAENGPVAVGMD 224          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: LMCPA_LEIME (Cysteine proteinase A OS=Leishmania mexicana GN=LMCPA PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.352e-28
Identity = 74/181 (40.88%), Postives = 105/181 (58.01%), Query Frame = 1
Query:   34 RFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIID--NGGIDTEDDYPYKAIDGSCDTYRKNAKV-VTIDDYEDVPLNDEKALQKAVANQPVSVAIE 567
            +FADLT +E+  +YL   + A+   LK+ + D ++     +   SVDWR KGAV  VK+QG CGSCWAFS I  +EG       SL+SLSEQ LV CD + +EGCNGGLMD A  +I+   NG + TE  YPY +  G+        +V   I  +  +P ++E+  +      PV+VA++
Sbjct:   90 KFADLTPQEFAKLYLNPDYYARH--LKNHKEDVHVDDSAPSGVMSVDWRDKGAVTPVKNQGLCGSCWAFSAIGNIEGQWAASGHSLVSLSEQMLVSCD-NIDEGCNGGLMDQAMNWIMQSHNGSVFTEASYPYTSGGGTRPPCHDEGEVGAKITGFLSLPHDEERIAEWVEKRGPVAVAVD 267          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CYSP1_LEIPI (Cysteine proteinase 1 OS=Leishmania pifanoi GN=CYS1 PE=2 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 3.072e-28
Identity = 74/181 (40.88%), Postives = 104/181 (57.46%), Query Frame = 1
Query:   34 RFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIID--NGGIDTEDDYPYKAIDGSCDTYRKNAKV-VTIDDYEDVPLNDEKALQKAVANQPVSVAIE 567
            +FADLT +E+  +YL   + A+   LK  + D ++     +   SVDWR KGAV  VK+QG CGSCWAFS I  +EG       SL+SLSEQ LV CD + +EGCNGGLMD A  +I+   NG + TE  YPY +  G+        +V   I  +  +P ++E+  +      PV+VA++
Sbjct:   90 KFADLTPQEFAKLYLNPDYYARH--LKDHKEDVHVDDSAPSGVMSVDWRDKGAVTPVKNQGLCGSCWAFSAIGNIEGQWAASGHSLVSLSEQMLVSCD-NIDEGCNGGLMDQAMNWIMQSHNGSVFTEASYPYTSGGGTRPPCHDEGEVGAKITGFLSLPHDEERIAEWVEKRGPVAVAVD 267          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CYSP_TRYCR (Cruzipain OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.167e-27
Identity = 76/193 (39.38%), Postives = 107/193 (55.44%), Query Frame = 1
Query:    1 AENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFII--DNGGIDTEDDYPYKAIDGSCDTYRKNAKVV--TIDDYEDVPLNDEKALQKAVANQPVSVAIE 567
            A N     G+  F+DLT EE+RS Y     GA   +   +R+   +       P +VDWR +GAV  VKDQG CGSCWAFS I  VE    +    L +LSEQ LV CD + + GC+GGLM+ AFE+I+  +NG + TED YPY + +G       +   V  TI  + ++P ++ +       N PV+VA++
Sbjct:   74 AANPHATFGVTPFSDLTREEFRSRYHN---GAAHFAAAQERARVPVKVEVVGAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKT-DSGCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAVD 262          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CATJ_MOUSE (Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 1.525e-27
Identity = 74/186 (39.78%), Postives = 101/186 (54.30%), Query Frame = 1
Query:   16 YKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIE 567
            + + +N+F D T+EE+R         A  T   ++        V   LPD  DWR++G V  V++QG CGSCWAF+   A+EG     TG+L  LS Q L+DC  T  N+GC  G    AFE+++ N G++ E  YPY+  DG C  YR       I DY ++P N E  L  AVA+  PVS AI+
Sbjct:   73 FTMKMNKFGDQTSEEFRKSIDNIPIPAAMTDPHAQN------HVSIGLPDYKDWREEGYVTPVRNQGKCGSCWAFAAAGAIEGQMFWKTGNLTPLSVQNLLDCSKTVGNKGCQSGTAHQAFEYVLKNKGLEAEATYPYEGKDGPC-RYRSENASANITDYVNLPPN-ELYLWVAVASIGPVSAAID 250          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CATL1_PARTE (Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT00020990001 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.991e-27
Identity = 74/191 (38.74%), Postives = 107/191 (56.02%), Query Frame = 1
Query:    4 ENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDW--RKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIE 567
            E  T+ + LN+FAD++ +E+   YL  +    RT+  +  +  +  +  E     VDW   KK     VK+QGSCGSCWAFS + A+E    I       LSEQ+LVDC   Y N+GCNGG MD AFE++ DNG  + + DYPY A DG+C T  K      +  ++D+   DE  L + +  + V+VA++
Sbjct:   65 EEATFTLELNQFADMSQQEFAQTYLSLK--VPRTAKLNAANSNFQYKGAE-----VDWTDNKKVKYPAVKNQGSCGSCWAFSAVGALEINTDIELNRKYELSEQDLVDCSGPYDNDGCNGGWMDSAFEYVADNGLAEAK-DYPYTAKDGTCKTSVKR-PYTHVQGFKDIDSCDE--LAQTIQERTVAVAVD 244          
The following BLAST results are available for this feature:
BLAST of CX287280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
CYSP2_LEIPI2.127e-2940.40Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS... [more]
CATL2_PARTE2.778e-2941.36Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT0... [more]
TEST2_RAT4.739e-2939.57Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2[more]
BROM2_ANACO1.379e-2848.20Stem bromelain OS=Ananas comosus PE=1 SV=1[more]
ACP1_ENTHI1.379e-2842.31Cysteine proteinase ACP1 OS=Entamoeba histolytica ... [more]
LMCPA_LEIME2.352e-2840.88Cysteine proteinase A OS=Leishmania mexicana GN=LM... [more]
CYSP1_LEIPI3.072e-2840.88Cysteine proteinase 1 OS=Leishmania pifanoi GN=CYS... [more]
CYSP_TRYCR1.167e-2739.38Cruzipain OS=Trypanosoma cruzi PE=1 SV=1[more]
CATJ_MOUSE1.525e-2739.78Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2[more]
CATL1_PARTE1.991e-2738.74Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT0... [more]

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Properties
Property NameValue
Genbank descriptionC01006G09SK Veg1 Citrus clementina cDNA clone C01006G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287280 ID=CX287280; Name=CX287280; organism=Citrus clementina; type=EST; length=581bp
GCAGAGAACCGGACCTACAAGGTTGGGTTGAACCGGTTTGCTGATTTGAC
CAACGAGGAGTACCGGTCCATGTATCTGGGTGCACGCTTTGGTGCTAAAA
GGACTTCCTTGAAATCAAAGAGGAGCGATCGTTATCTGCCACGTGTCGGC
GAGGCGTTGCCGGACTCTGTTGATTGGAGGAAGAAAGGAGCTGTCGCTGA
AGTTAAAGATCAAGGAAGCTGTGGGAGTTGCTGGGCATTTTCAACCATTG
CTGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGCCTGATCTCACTA
TCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAATGAAGGATGTAA
TGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTGATAATGGAGGTA
TTGACACAGAAGATGATTACCCCTACAAAGCCATTGATGGTAGCTGTGAC
ACATATCGGAAAAATGCCAAAGTAGTTACAATTGATGACTATGAAGATGT
TCCCCTAAATGACGAGAAAGCTTTGCAAAAGGCAGTTGCAAATCAACCCG
TGAGTGTTGCGATTGAAGGAGGTGGCATGGC
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