CX287280

Overview
NameCX287280
Unique NameCX287280
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length581
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CATV_NPVAH (Viral cathepsin OS=Adoxophyes honmai nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.093e-25
Identity = 64/192 (33.33%), Postives = 102/192 (53.12%), Query Frame = 1
Query:   28 LNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYL--------PRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGM 579
            +N+F+DL+  E  + Y G    +K+ S   + +  +         P V + LP + DWR    +  VKDQG+CGSCWA + +  +E +  I    LI+LSEQ+L+DCD S N  C+GGLM  AFE +++ GG+  E DYPY+   G C    K   +        +  N+E   ++ +   P+++AI+   +
Sbjct:   77 INKFSDLSKNELLTKYTGLT--SKKPSNMVRSTSNFCNVIHLDAPPDVHDELPQNFDWRVNNKMTSVKDQGACGSCWAHAAVGTLETLYAIKHNYLINLSEQQLIDCD-SANMACDGGLMHTAFEQLMNAGGLMEEIDYPYQGTKGVCKIDNKKFALSVSSCKRYIFQNEENLKKELITMGPIAMAIDAASI 265          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.427e-25
Identity = 70/186 (37.63%), Postives = 104/186 (55.91%), Query Frame = 1
Query:   13 TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVT-IDDYEDVPLNDEKALQKAVANQPVSVAIE 567
            TYK+  N+F+DL+  E  + + G     + ++          P  G   P   DWR++  V  +K+QG+CG+CWAF+T+A+VE    +    LI LSEQ+L+DCD S + GCNGGL+  AFE I+  GG+ TE DYP+   +  C   R    VV+ +  Y  V +N+EK      A  P+ +AI+
Sbjct:  101 TYKI--NKFSDLSKSELIAKFTGLSIPERVSNFCKTIILNQPPDKG---PLHFDWREQNKVTSIKNQGACGACWAFATLASVESQFAMRHNRLIDLSEQQLIDCD-SVDMGCNGGLLHTAFEEIMRMGGVQTELDYPFVGRNRRCGLDRHRPYVVSLVGCYRYVMVNEEKLKDLLRAVGPIPMAID 280          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CATR_MOUSE (Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.427e-25
Identity = 64/185 (34.59%), Postives = 94/185 (50.81%), Query Frame = 1
Query:   16 YKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIE 567
            + + +N F D T+EE+R M +       R      + +      G  LP  VDWRKKG V  V+ QG C +CWAF+   A+E      TG L  LS Q LVDC     N GC GG    AF++++ NGG+++E  YPY+  DG C    KN+K   I  +  +P +++  +       P++  I+
Sbjct:   73 FTMKMNEFGDQTDEEFRKMMIEISVWTHREGKSIMKRE-----AGSILPKFVDWRKKGYVTPVRRQGDCDACWAFAVTGAIEAQAIWQTGKLTPLSVQNLVDCSKPQGNNGCLGGDTYNAFQYVLHNGGLESEATYPYEGKDGPCRYNPKNSK-AEITGFVSLPQSEDILMAAVATIGPITAGID 251          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CPP3_ENTHI (Cysteine proteinase 3 (Fragment) OS=Entamoeba histolytica GN=CPNP PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.864e-25
Identity = 72/184 (39.13%), Postives = 101/184 (54.89%), Query Frame = 1
Query:   37 FADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRV---GEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEG---INKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIE 567
            FA +TNEEYR++            LKSKR+     +V       P+SVDWR +G V  ++DQ  CGSC+ F ++AA+EG   I K    + + LSE+ LV C   + N GCNGGL    +++II N G+  E DYPY   D +C T  K    +T   Y  VP N+E  L+ A++   V V+I+
Sbjct:   56 FAAMTNEEYRTL------------LKSKRTVEENGKVTYLNIQAPESVDWRAQGKVTPIRDQAQCGSCYTFGSLAALEGRLLIEKGGNANTLDLSEEHLVQCTRDNGNNGCNGGLGSNVYDYIIQN-GVAKESDYPYTGTDSTCKTNVKAFAKIT--GYNKVPRNNEAELKAALSQGLVDVSID 224          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CPP1_ENTHI (Cysteine proteinase 1 OS=Entamoeba histolytica GN=CPP1 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.434e-25
Identity = 77/202 (38.12%), Postives = 109/202 (53.96%), Query Frame = 1
Query:    1 AENR---TYKVGLNR-FADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEG---INKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKV-VTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGM 579
            AEN    T+K+ ++  FA +TNEEY S+    R G ++  +      RYL       P +VDWRKKG V  ++DQG+CGSC+ F +IAA+EG   I K      + LSE+ +V C     N GCNGGL    + +I++N GI  E DYPY   D +C   R + K    I  Y  V  N+E  L+ A++   V V+I+   +
Sbjct:   47 AENNRKETFKLSVDGPFAAMTNEEYNSLLKLKRSGEEKGEV------RYL---NIQAPKAVDWRKKGKVTPIRDQGNCGSCYTFGSIAALEGRLLIEKGGDSETLDLSEEHMVQCTREDGNNGCNGGLGSNVYNYIMEN-GIAKESDYPYTGSDSTC---RSDVKAFAKIKSYNRVARNNEVELKAAISQGLVDVSIDASSV 235          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CATV_NPVHC (Viral cathepsin OS=Hyphantria cunea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.434e-25
Identity = 66/185 (35.68%), Postives = 99/185 (53.51%), Query Frame = 1
Query:   13 TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIE 567
            T +  +N+F+DL+ +E  S Y G     +  +         L R  +  P   DWR+   V  VK+QG CG+CWAF+T+A++E    I    LI+LSEQ+L+DCD   + GCNGGL+  A+E ++  GG+  E+DYPY+  DG+C        V     Y  + + +EK         P+ VAI+
Sbjct:   68 TAQYEINKFSDLSKDETISKYTGLALPLQTQNFCEVV---VLNRPPDKGPLEFDWRRLNKVTSVKNQGICGACWAFATLASLESQFAIKHNQLINLSEQQLIDCD-YVDAGCNGGLLHTAYEAVMQMGGVQAENDYPYEGSDGNCRVDVAKFVVKVKKCYRYIAVFEEKLKDLLRIVGPIPVAID 248          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CATV_NPVBM (Viral cathepsin OS=Bombyx mori nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.434e-25
Identity = 66/188 (35.11%), Postives = 99/188 (52.66%), Query Frame = 1
Query:    4 ENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIE 567
            +N + K  +N+F+DL+ +E  + Y G     +  +          P  G   P   DWR+   V  VK+QG CG+CWAF+T+ ++E    I    LI+LSEQ+++DCD   + GCNGGL+  AFE II  GG+  E DYPY+A + +C        V   D Y  + + +EK         P+ +AI+
Sbjct:   64 QNDSAKYEINKFSDLSKDETIAKYTGLSLPTQTQNFCKVILLDQPPGKG---PLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCD-FVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNNNCRMNSNKFLVQVKDCYRYIIVYEEKLKDLLPLVGPIPMAID 247          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CATV_GVCP (Viral cathepsin OS=Cydia pomonella granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.179e-25
Identity = 67/185 (36.22%), Postives = 101/185 (54.59%), Query Frame = 1
Query:   28 LNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEA----LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQK-AVANQPVSVAIE 567
            +N ++DL          G R G K+       ++  +  + +     LP+++DWR K  V  VK+Q  CGSCWAFSTIA +E +  I     ++LSEQ LV+CD + N GC GGLM +A E I+  GG+ + ++ PY   DG C   +K+   ++I       L +E  L++  V N P+SVAI+
Sbjct:   77 INEYSDLNKNALLRRTTGFRLGLKKNPSAFTMTECSVVVIKDEPQALLPETLDWRDKHGVTPVKNQMECGSCWAFSTIANIESLYNIKYDKALNLSEQHLVNCD-NINNGCAGGLMHWALESILQEGGVVSAENEPYYGFDGVC---KKSPFELSISGSRRYVLQNENKLRELLVVNGPISVAID 257          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CATV_NPVCF (Viral cathepsin OS=Choristoneura fumiferana nuclear polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 4.152e-25
Identity = 66/185 (35.68%), Postives = 98/185 (52.97%), Query Frame = 1
Query:   13 TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIE 567
            T +  +N+FADL+ +E  S Y G     +  +         L R  +  P   DWR+   V  VK+QG CG+CWAF+T+ ++E    I     I+LSEQ+L+DCD   + GC+GGL+  AFE +++ GGI  E DYPY+A +G C        V     Y  + + +EK      +  P+ VAI+
Sbjct:   68 TAQYEINKFADLSKDETISKYTGLSLPLQTQNFCEVV---VLDRPPDKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNQFINLSEQQLIDCD-FVDAGCDGGLLHTAFEAVMNMGGIQAESDYPYEANNGDCRANAAKFVVKVKKCYRYITVFEEKLKDLLRSVGPIPVAID 248          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CATV_NPVAP (Viral cathepsin OS=Antheraea pernyi nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 5.422e-25
Identity = 66/180 (36.67%), Postives = 98/180 (54.44%), Query Frame = 1
Query:   28 LNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIE 567
            +N+F+DL+ +E  S Y G     ++ +         L R  +  P   DWR+   V  VK+QG CG+CWAF+T+ ++E    I    LI+LSEQ+L+DCD   + GC+GGL+  A+E +++ GGI  E+DYPY+A +G C        V     Y  V L +EK         P+ VAI+
Sbjct:   73 INKFSDLSKDETISKYTGLSLPLQKQNFCEVV---VLDRPPDKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHDQLINLSEQQLIDCD-FVDVGCDGGLLHTAYEAVMNMGGIQAENDYPYEANNGPCRVNAAKFVVRVKKCYRYVTLFEEKLKDLLRIVGPIPVAID 248          
The following BLAST results are available for this feature:
BLAST of CX287280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
CATV_NPVAH1.093e-2533.33Viral cathepsin OS=Adoxophyes honmai nucleopolyhed... [more]
CATV_NPVLD1.427e-2537.63Viral cathepsin OS=Lymantria dispar multicapsid nu... [more]
CATR_MOUSE1.427e-2534.59Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1[more]
CPP3_ENTHI1.864e-2539.13Cysteine proteinase 3 (Fragment) OS=Entamoeba hist... [more]
CPP1_ENTHI2.434e-2538.12Cysteine proteinase 1 OS=Entamoeba histolytica GN=... [more]
CATV_NPVHC2.434e-2535.68Viral cathepsin OS=Hyphantria cunea nuclear polyhe... [more]
CATV_NPVBM2.434e-2535.11Viral cathepsin OS=Bombyx mori nuclear polyhedrosi... [more]
CATV_GVCP3.179e-2536.22Viral cathepsin OS=Cydia pomonella granulosis viru... [more]
CATV_NPVCF4.152e-2535.68Viral cathepsin OS=Choristoneura fumiferana nuclea... [more]
CATV_NPVAP5.422e-2536.67Viral cathepsin OS=Antheraea pernyi nuclear polyhe... [more]

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Properties
Property NameValue
Genbank descriptionC01006G09SK Veg1 Citrus clementina cDNA clone C01006G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287280 ID=CX287280; Name=CX287280; organism=Citrus clementina; type=EST; length=581bp
GCAGAGAACCGGACCTACAAGGTTGGGTTGAACCGGTTTGCTGATTTGAC
CAACGAGGAGTACCGGTCCATGTATCTGGGTGCACGCTTTGGTGCTAAAA
GGACTTCCTTGAAATCAAAGAGGAGCGATCGTTATCTGCCACGTGTCGGC
GAGGCGTTGCCGGACTCTGTTGATTGGAGGAAGAAAGGAGCTGTCGCTGA
AGTTAAAGATCAAGGAAGCTGTGGGAGTTGCTGGGCATTTTCAACCATTG
CTGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGCCTGATCTCACTA
TCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAATGAAGGATGTAA
TGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTGATAATGGAGGTA
TTGACACAGAAGATGATTACCCCTACAAAGCCATTGATGGTAGCTGTGAC
ACATATCGGAAAAATGCCAAAGTAGTTACAATTGATGACTATGAAGATGT
TCCCCTAAATGACGAGAAAGCTTTGCAAAAGGCAGTTGCAAATCAACCCG
TGAGTGTTGCGATTGAAGGAGGTGGCATGGC
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