CX287287

Overview
NameCX287287
Unique NameCX287287
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length557
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_ACTSZ (Chaperone protein htpG OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=htpG PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.028e-14
Identity = 36/62 (58.06%), Postives = 50/62 (80.65%), Query Frame = 1
Query:  316 YQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPD 501
            +Q EV +L+ L++HSLYS+KE+FLREL+SNASDA DKLRF +++ P L    GDL++RI+ D
Sbjct:   10 FQTEVKQLLQLMIHSLYSNKEIFLRELISNASDAADKLRFKALSAPELYEGDGDLKVRIRFD 71          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HSP90_EIMTE (Heat shock protein 90 OS=Eimeria tenella GN=HSP90 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.028e-14
Identity = 36/69 (52.17%), Postives = 52/69 (75.36%), Query Frame = 1
Query:  304 EKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPDPEN 510
            E F + A++ +LM LI+++ YS+KE+FLREL+SNASDALDK+R+ ++TEP  L    +L IR+ PD  N
Sbjct:    5 ETFAFNADIQQLMSLIINTFYSNKEIFLRELISNASDALDKIRYEAITEPEKLKTKPELFIRLIPDKAN 73          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_SODGM (Chaperone protein htpG OS=Sodalis glossinidius (strain morsitans) GN=htpG PE=3 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 3.955e-14
Identity = 35/64 (54.69%), Postives = 51/64 (79.69%), Query Frame = 1
Query:  316 YQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPDPE 507
            +Q+EV +L+ L++HSLYS+KE+FLREL+SNASDA DKLRF ++++P L    G+L +R+  D E
Sbjct:    9 FQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSQPDLYEGDGELRVRLSCDKE 72          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_SHESR (Chaperone protein htpG OS=Shewanella sp. (strain MR-7) GN=htpG PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.955e-14
Identity = 37/68 (54.41%), Postives = 51/68 (75.00%), Query Frame = 1
Query:  304 EKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPDPE 507
            E   +Q EV +L+ L++HSLYS+KE+FLRELVSNA+DA DKLR+L++T  +L    G+L +RI  D E
Sbjct:    5 ETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTNDALYEGDGELRVRISADKE 72          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_SHESM (Chaperone protein htpG OS=Shewanella sp. (strain MR-4) GN=htpG PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.955e-14
Identity = 37/68 (54.41%), Postives = 51/68 (75.00%), Query Frame = 1
Query:  304 EKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPDPE 507
            E   +Q EV +L+ L++HSLYS+KE+FLRELVSNA+DA DKLR+L++T  +L    G+L +RI  D E
Sbjct:    5 ETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTNDALYEGDGELRVRISADKE 72          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_SHESA (Chaperone protein htpG OS=Shewanella sp. (strain ANA-3) GN=htpG PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.955e-14
Identity = 37/68 (54.41%), Postives = 51/68 (75.00%), Query Frame = 1
Query:  304 EKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPDPE 507
            E   +Q EV +L+ L++HSLYS+KE+FLRELVSNA+DA DKLR+L++T  +L    G+L +RI  D E
Sbjct:    5 ETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTNDALYEGDGELRVRISADKE 72          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_SHEON (Chaperone protein htpG OS=Shewanella oneidensis GN=htpG PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.955e-14
Identity = 37/68 (54.41%), Postives = 51/68 (75.00%), Query Frame = 1
Query:  304 EKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPDPE 507
            E   +Q EV +L+ L++HSLYS+KE+FLRELVSNA+DA DKLR+L++T  +L    G+L +RI  D E
Sbjct:    5 ETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTNDALYEGDGELRVRISADKE 72          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_SHEB9 (Chaperone protein htpG OS=Shewanella baltica (strain OS195) GN=htpG PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.955e-14
Identity = 37/68 (54.41%), Postives = 51/68 (75.00%), Query Frame = 1
Query:  304 EKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPDPE 507
            E   +Q EV +L+ L++HSLYS+KE+FLRELVSNA+DA DKLR+L++T  +L    G+L +RI  D E
Sbjct:    5 ETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTNDALYEGDGELRVRISADKE 72          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_SHEB8 (Chaperone protein htpG OS=Shewanella baltica (strain OS185) GN=htpG PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.955e-14
Identity = 37/68 (54.41%), Postives = 51/68 (75.00%), Query Frame = 1
Query:  304 EKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPDPE 507
            E   +Q EV +L+ L++HSLYS+KE+FLRELVSNA+DA DKLR+L++T  +L    G+L +RI  D E
Sbjct:    5 ETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTNDALYEGDGELRVRISADKE 72          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_SHEB5 (Chaperone protein htpG OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=htpG PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.955e-14
Identity = 37/68 (54.41%), Postives = 51/68 (75.00%), Query Frame = 1
Query:  304 EKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPDPE 507
            E   +Q EV +L+ L++HSLYS+KE+FLRELVSNA+DA DKLR+L++T  +L    G+L +RI  D E
Sbjct:    5 ETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTNDALYEGDGELRVRISADKE 72          
The following BLAST results are available for this feature:
BLAST of CX287287 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 366
Match NameE-valueIdentityDescription
HTPG_ACTSZ3.028e-1458.06Chaperone protein htpG OS=Actinobacillus succinoge... [more]
HSP90_EIMTE3.028e-1452.17Heat shock protein 90 OS=Eimeria tenella GN=HSP90 ... [more]
HTPG_SODGM3.955e-1454.69Chaperone protein htpG OS=Sodalis glossinidius (st... [more]
HTPG_SHESR3.955e-1454.41Chaperone protein htpG OS=Shewanella sp. (strain M... [more]
HTPG_SHESM3.955e-1454.41Chaperone protein htpG OS=Shewanella sp. (strain M... [more]
HTPG_SHESA3.955e-1454.41Chaperone protein htpG OS=Shewanella sp. (strain A... [more]
HTPG_SHEON3.955e-1454.41Chaperone protein htpG OS=Shewanella oneidensis GN... [more]
HTPG_SHEB93.955e-1454.41Chaperone protein htpG OS=Shewanella baltica (stra... [more]
HTPG_SHEB83.955e-1454.41Chaperone protein htpG OS=Shewanella baltica (stra... [more]
HTPG_SHEB53.955e-1454.41Chaperone protein htpG OS=Shewanella baltica (stra... [more]

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Properties
Property NameValue
Genbank descriptionC01006H04SK Veg1 Citrus clementina cDNA clone C01006H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287287 ID=CX287287; Name=CX287287; organism=Citrus clementina; type=EST; length=557bp
GTTCAAACCATCTTATTAAGCCAGCCCATTATCTTCTTCTCTCTCTGTAT
TCGAAGCCTTTTAATGGCTCCAGTTCTGAGCAGAACATTAGCCACTACCT
CTTTAGTGTCACTTCCAACTTCAACTCCTTTTTCTTTTAAACACTCCAAC
AACAAGGCCTTCAATTTCAGAAGCGCTTTTTTGCCGAGAAGTGGCGGCTT
AACTTGTGCTGGATTGAAGTGGAACCTTCAGAAGAGGAATAAAAGAGTCG
GGATACGGTGTGATGCTGCTGTTGCTGACAAAGAGGCCCCTGATACTTCT
GGTGAGAAGTTCGAGTACCAAGCCGAGGTCAGTCGCCTGATGGACTTGAT
TGTTCATAGTCTGTACAGCCACAAGGAGGTGTTCCTGCGAGAGCTTGTGA
GCAATGCAAGTGATGCTTTGGATAAGTTGAGATTTTTAAGTGTTACCGAG
CCCTCTCTTCTTGGAGATGCTGGCGATCTTGAGATTCGCATCAAGCCTGA
TCCAGAAAATGGGACCATCACCATAACGGATACTGGTATTGGAATGACTA
AAGAAGA
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