CX287287

Overview
NameCX287287
Unique NameCX287287
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length557
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_RICBR (Chaperone protein htpG OS=Rickettsia bellii (strain RML369-C) GN=htpG PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.955e-14
Identity = 35/69 (50.72%), Postives = 53/69 (76.81%), Query Frame = 1
Query:  304 EKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPDPEN 510
            EK ++ AEV ++++L++HSLYS+KE+F+REL+SNASDA DKLR+LS +E  L+    + +I +K D  N
Sbjct:    4 EKKKFDAEVGKILNLMIHSLYSNKEIFMRELISNASDACDKLRYLSQSEAELVAGDSNFKITVKGDKNN 72          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_RICB8 (Chaperone protein htpG OS=Rickettsia bellii (strain OSU 85-389) GN=htpG PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.955e-14
Identity = 35/69 (50.72%), Postives = 53/69 (76.81%), Query Frame = 1
Query:  304 EKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPDPEN 510
            EK ++ AEV ++++L++HSLYS+KE+F+REL+SNASDA DKLR+LS +E  L+    + +I +K D  N
Sbjct:    4 EKKKFDAEVGKILNLMIHSLYSNKEIFMRELISNASDACDKLRYLSQSEAELVAGDSNFKITVKGDKNN 72          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_PSEPK (Chaperone protein htpG OS=Pseudomonas putida (strain KT2440) GN=htpG PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.955e-14
Identity = 37/72 (51.39%), Postives = 52/72 (72.22%), Query Frame = 1
Query:  292 DTSGEKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPDPE 507
            +T  E   +Q EV +L+ L++HSLYS+KE+FLREL+SNASDA DKLRF ++ +P L     DL+IR+  D +
Sbjct:    4 ETQKETLGFQTEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFEALAKPELFEGDADLKIRLSFDKD 75          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_NITMU (Chaperone protein htpG OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=htpG PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.955e-14
Identity = 37/68 (54.41%), Postives = 51/68 (75.00%), Query Frame = 1
Query:  304 EKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPDPE 507
            E   +Q EV +L+ L++HSLYS+KE+FLREL+SNASDA DKLRF ++T+ +L     DL+IR+  D E
Sbjct:    8 EHLNFQTEVKQLLKLMIHSLYSNKEIFLRELISNASDAADKLRFEALTDGALYESDSDLKIRVSYDKE 75          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_CHLCH (Chaperone protein htpG OS=Chlorobium chlorochromatii (strain CaD3) GN=htpG PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.955e-14
Identity = 35/68 (51.47%), Postives = 53/68 (77.94%), Query Frame = 1
Query:  304 EKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPDPE 507
            ++FEY+AE+ +L+DLI+HSLY+H E++LREL+SNASDAL K RF ++T+  +L    +L IR+  + E
Sbjct:   14 QEFEYKAEMKQLLDLIIHSLYTHPEIYLRELISNASDALSKARFNALTDQDMLDKDAELAIRLTLNAE 81          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HSP90_CANAL (Heat shock protein 90 homolog OS=Candida albicans GN=HSP90 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.955e-14
Identity = 37/72 (51.39%), Postives = 55/72 (76.39%), Query Frame = 1
Query:  292 DTSGEKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPDPE 507
            D   E  E+ AE+S+LM LI++++YS+KE+FLREL+SNASDALDK+R+ ++++PS L    +L IRI P  +
Sbjct:    3 DAKVETHEFTAEISQLMSLIINTVYSNKEIFLRELISNASDALDKIRYQALSDPSQLESEPELFIRIIPQKD 74          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_SHEAM (Chaperone protein htpG OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=htpG PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.165e-14
Identity = 36/68 (52.94%), Postives = 51/68 (75.00%), Query Frame = 1
Query:  304 EKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPDPE 507
            E   +Q EV +L+ L++HSLYS+KE+FLRELVSNA+DA DKLR+L++T  SL    G+L +R+  D +
Sbjct:    5 ETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTNDSLYEGDGELRVRVSADKD 72          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_RHOPS (Chaperone protein htpG OS=Rhodopseudomonas palustris (strain BisB5) GN=htpG PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.165e-14
Identity = 37/69 (53.62%), Postives = 53/69 (76.81%), Query Frame = 1
Query:  292 DTSGEKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKP 498
            DT+ E   +QAEV+ L++L+VHS+YS  ++FLREL+SNASDALDKLR+ S+  P+L+   G  +I+I P
Sbjct:    5 DTASETKPFQAEVAELLNLMVHSVYSETDIFLRELISNASDALDKLRYESIATPALMEAGGAPKIQIVP 73          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_METFK (Chaperone protein htpG OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=htpG1 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.165e-14
Identity = 37/68 (54.41%), Postives = 52/68 (76.47%), Query Frame = 1
Query:  304 EKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPDPE 507
            E   +QAEV +L+ L++HSLYS+KE+ LREL+SNASDA DKLRF ++ + SL G+  DL+IR+  D +
Sbjct:    9 ETLGFQAEVKQLLQLMIHSLYSNKEIVLRELISNASDAADKLRFEALADNSLYGNDSDLKIRVSFDKQ 76          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_MANSM (Chaperone protein htpG OS=Mannheimia succiniciproducens (strain MBEL55E) GN=htpG PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.165e-14
Identity = 36/62 (58.06%), Postives = 49/62 (79.03%), Query Frame = 1
Query:  316 YQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPD 501
            +Q EV +L+ L++HSLYS+KE+FLREL+SNASDA DKLRF +++ P L    GDL++RI  D
Sbjct:    9 FQTEVKQLLQLMIHSLYSNKEIFLRELISNASDAADKLRFKALSAPELYEGDGDLKVRISFD 70          
The following BLAST results are available for this feature:
BLAST of CX287287 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 366
Match NameE-valueIdentityDescription
HTPG_RICBR3.955e-1450.72Chaperone protein htpG OS=Rickettsia bellii (strai... [more]
HTPG_RICB83.955e-1450.72Chaperone protein htpG OS=Rickettsia bellii (strai... [more]
HTPG_PSEPK3.955e-1451.39Chaperone protein htpG OS=Pseudomonas putida (stra... [more]
HTPG_NITMU3.955e-1454.41Chaperone protein htpG OS=Nitrosospira multiformis... [more]
HTPG_CHLCH3.955e-1451.47Chaperone protein htpG OS=Chlorobium chlorochromat... [more]
HSP90_CANAL3.955e-1451.39Heat shock protein 90 homolog OS=Candida albicans ... [more]
HTPG_SHEAM5.165e-1452.94Chaperone protein htpG OS=Shewanella amazonensis (... [more]
HTPG_RHOPS5.165e-1453.62Chaperone protein htpG OS=Rhodopseudomonas palustr... [more]
HTPG_METFK5.165e-1454.41Chaperone protein htpG OS=Methylobacillus flagella... [more]
HTPG_MANSM5.165e-1458.06Chaperone protein htpG OS=Mannheimia succiniciprod... [more]

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Properties
Property NameValue
Genbank descriptionC01006H04SK Veg1 Citrus clementina cDNA clone C01006H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287287 ID=CX287287; Name=CX287287; organism=Citrus clementina; type=EST; length=557bp
GTTCAAACCATCTTATTAAGCCAGCCCATTATCTTCTTCTCTCTCTGTAT
TCGAAGCCTTTTAATGGCTCCAGTTCTGAGCAGAACATTAGCCACTACCT
CTTTAGTGTCACTTCCAACTTCAACTCCTTTTTCTTTTAAACACTCCAAC
AACAAGGCCTTCAATTTCAGAAGCGCTTTTTTGCCGAGAAGTGGCGGCTT
AACTTGTGCTGGATTGAAGTGGAACCTTCAGAAGAGGAATAAAAGAGTCG
GGATACGGTGTGATGCTGCTGTTGCTGACAAAGAGGCCCCTGATACTTCT
GGTGAGAAGTTCGAGTACCAAGCCGAGGTCAGTCGCCTGATGGACTTGAT
TGTTCATAGTCTGTACAGCCACAAGGAGGTGTTCCTGCGAGAGCTTGTGA
GCAATGCAAGTGATGCTTTGGATAAGTTGAGATTTTTAAGTGTTACCGAG
CCCTCTCTTCTTGGAGATGCTGGCGATCTTGAGATTCGCATCAAGCCTGA
TCCAGAAAATGGGACCATCACCATAACGGATACTGGTATTGGAATGACTA
AAGAAGA
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