CX287296
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPE_MACFA (T-complex protein 1 subunit epsilon OS=Macaca fascicularis GN=CCT5 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.309e-11 Identity = 41/127 (32.28%), Postives = 71/127 (55.91%), Query Frame = 3 Query: 18 AIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGD--EFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKW 392 A+R + + IA A G IV R EL +G AGL + G + I CK+ +A T+ +RG +K ++ E +R+L DA+ V RN+I++ ++V GGGA E++ + + Q++ +E++ Sbjct: 321 AVRWVGGPEIELIAIATGGRIVPRFSELTAEKLGF-AGLVQEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQY 446
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPE_HUMAN (T-complex protein 1 subunit epsilon OS=Homo sapiens GN=CCT5 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.309e-11 Identity = 41/127 (32.28%), Postives = 71/127 (55.91%), Query Frame = 3 Query: 18 AIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGD--EFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKW 392 A+R + + IA A G IV R EL +G AGL + G + I CK+ +A T+ +RG +K ++ E +R+L DA+ V RN+I++ ++V GGGA E++ + + Q++ +E++ Sbjct: 321 AVRWVGGPEIELIAIATGGRIVPRFSELTAEKLGF-AGLVQEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQY 446
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPA_DROME (T-complex protein 1 subunit alpha OS=Drosophila melanogaster GN=T-cp1 PE=2 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 3.309e-11 Identity = 41/135 (30.37%), Postives = 74/135 (54.81%), Query Frame = 3 Query: 3 KAGVSAIRRLRKTDNNRIAKACGAVIVNR------PDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEK 389 +AG A+RR++K+D IAKA GA + + S VG A + + ++I D+ I K A +++LRG + +E+ER++ DA+ V + ++++ K+V GGG E +S L+ ++S+ E+ Sbjct: 305 EAGAMAVRRVKKSDLKIIAKATGAAFITSLTNMDGEESFDASMVGEAAEVAQ-ERICDDELILIKGTKARAAASIILRGPNDFYCDEMERSVHDALCVVKRVLESKKVVAGGGCVEAALSIYLENFATSLASREQ 438
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPZ_YEAST (T-complex protein 1 subunit zeta OS=Saccharomyces cerevisiae GN=CCT6 PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.321e-11 Identity = 32/118 (27.12%), Postives = 66/118 (55.93%), Query Frame = 3 Query: 3 KAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLK 356 K + A+RR ++ + R+ G N ++L +G +GL + IG+E F ++ + DPK+CT+L++G++ L + + ++D + N++K+ ++PG GA + +S L+ Sbjct: 311 KHNILALRRAKRRNMERLQLVTGGEAQNSVEDLSPQILGF-SGLVYQETIGEEKFTYVTENTDPKSCTILIKGSTHYALAQTKDAVRDGLRAVANVLKDKNIIPGAGAFYIALSRYLR 427
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPE_SCHPO (T-complex protein 1 subunit epsilon OS=Schizosaccharomyces pombe GN=cct5 PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.371e-11 Identity = 40/127 (31.50%), Postives = 73/127 (57.48%), Query Frame = 3 Query: 18 AIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGD--EFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKW 392 A+R + + IA A IV R ++L +G+ AG+ G + I C + +A TV +RG++K +++E +R L DA+ V RN+I++ ++V GGGA E++ S + +++ I GI+++ Sbjct: 323 AVRWVGGPEIELIAIATNGRIVPRFEDLSSDKLGS-AGIVREVSFGTTRDKILVIEKCANSRAVTVFVRGSNKMIVDEAKRALHDALCVVRNLIRDNRVVYGGGAAEISCSLAVTKEAEKIPGIDQY 448
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPE_PONAB (T-complex protein 1 subunit epsilon OS=Pongo abelii GN=CCT5 PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.371e-11 Identity = 41/127 (32.28%), Postives = 70/127 (55.12%), Query Frame = 3 Query: 18 AIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGD--EFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKW 392 A+R + + IA A G IV R EL +G AGL + G + I CK+ +A T+ +RG +K ++ E +R+L DA+ V RN+I++ ++V GGGA E + + + Q++ +E++ Sbjct: 321 AVRWVGGPEIELIAIATGGRIVPRFSELTAEKLGF-AGLVQEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAETSCALAVSQEADKCPTLEQY 446
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPE_ENCCU (T-complex protein 1 subunit epsilon OS=Encephalitozoon cuniculi GN=CCT5 PE=1 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.371e-11 Identity = 41/129 (31.78%), Postives = 75/129 (58.14%), Query Frame = 3 Query: 9 GVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKD--PKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEK 389 G+ A+R + + +A G IV R ++L+ESD+G + +G E IV + KA T+L+RGA+ ++ E +R+++DA+ RNI+ N ++V GGG++E++ S L++ ++ G E+ Sbjct: 312 GLPAVRWVGGHELELLAVHTGGSIVARFEDLEESDLGKAR--VREESLGTENDKIIVVENEGCSKAVTILVRGANDLVIEEAKRSIRDALCAVRNILTNSRIVYGGGSSEMSCSLALERIATGYSGEER 438
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPD_DEBHA (T-complex protein 1 subunit delta OS=Debaryomyces hansenii GN=CCT4 PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.371e-11 Identity = 37/135 (27.41%), Postives = 73/135 (54.07%), Query Frame = 3 Query: 3 KAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFI-VDCKDPK-ACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYE 401 K + I+ + + + ++KA G + D E +G+ + E++ G V K+ K +++ RGA++ +L+E ER++ DA+ V R ++K L+ GGGA E+ VS L +++ + G+E++ Y+ Sbjct: 312 KLNIMVIKDIERDEIEFLSKATGCKPIADIDNFTEDRLGSADVVEEIESSGSRIVKIDGVSAKNVKPTVSIVCRGANQLVLDETERSIHDALCVVRCLVKEKALIAGGGAPEIEVSRVLMSEANKLSGVEQFVYQ 446 The following BLAST results are available for this feature:
BLAST of CX287296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 108
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287296 ID=CX287296; Name=CX287296; organism=Citrus clementina; type=EST; length=402bpback to top |