CX287296
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPZ_BOVIN (T-complex protein 1 subunit zeta OS=Bos taurus GN=CCT6A PE=2 SV=3) HSP 1 Score: 82.4185 bits (202), Expect = 7.610e-16 Identity = 40/126 (31.75%), Postives = 74/126 (58.73%), Query Frame = 3 Query: 3 KAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEG 380 K G+ A+RR ++ + R+ ACG + +N D+L +G AGL +G+E F FI C +P++ T+L++G +K L +++ ++D + +N I + +VPG GA E+ ++ L + S++G Sbjct: 307 KEGIIALRRAKRRNMERLTLACGGIALNSLDDLNPDCLGH-AGLVYEYTLGEEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALVKYKPSVKG 431
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPZ_HUMAN (T-complex protein 1 subunit zeta OS=Homo sapiens GN=CCT6A PE=1 SV=3) HSP 1 Score: 82.0333 bits (201), Expect = 9.939e-16 Identity = 41/126 (32.54%), Postives = 74/126 (58.73%), Query Frame = 3 Query: 3 KAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEG 380 K G+ A+RR ++ + R+ ACG V +N D+L +G AGL +G+E F FI C +P++ T+L++G +K L +++ ++D + +N I + +VPG GA E+ ++ L + S++G Sbjct: 307 KEGIVALRRAKRRNMERLTLACGGVALNSFDDLSPDCLGH-AGLVYEYTLGEEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAVRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALIKHKPSVKG 431
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPW_BOVIN (T-complex protein 1 subunit zeta-2 OS=Bos taurus GN=CCT6B PE=2 SV=3) HSP 1 Score: 82.0333 bits (201), Expect = 9.939e-16 Identity = 41/126 (32.54%), Postives = 76/126 (60.32%), Query Frame = 3 Query: 3 KAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEG 380 K G+ A+RR ++ + R++ ACG V VN ++L +G AGL +G+E + FI DC +P++ T+L++G +K L +++ ++D + +N I++ +VPG GA E+ ++ L +I+G Sbjct: 307 KHGILALRRAKRRNMERLSLACGGVAVNSVEDLSVDCLGH-AGLVYEYTLGEEKYTFIEDCINPRSVTLLVKGPNKHTLTQIKDAVRDGLRAIKNAIEDGCVVPGAGAVEVVIAEALVTYKHTIQG 431
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPZ_MOUSE (T-complex protein 1 subunit zeta OS=Mus musculus GN=Cct6a PE=1 SV=3) HSP 1 Score: 81.2629 bits (199), Expect = 1.695e-15 Identity = 40/126 (31.75%), Postives = 74/126 (58.73%), Query Frame = 3 Query: 3 KAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEG 380 K G+ A+RR ++ + R+ ACG + +N D+L +G AGL +G+E F FI C +P++ T+L++G +K L +++ ++D + +N I + +VPG GA E+ ++ L + S++G Sbjct: 307 KEGIVALRRAKRRNMERLTLACGGIALNSFDDLNPDCLGH-AGLVYEYTLGEEKFTFIEKCNNPRSVTLLVKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVALAEALIKYKPSVKG 431
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPH_BOVIN (T-complex protein 1 subunit eta OS=Bos taurus GN=CCT7 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.214e-15 Identity = 45/118 (38.14%), Postives = 64/118 (54.24%), Query Frame = 3 Query: 27 RLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEG 380 R+ + D R ACG I + L SDV +FE +IG E + F C K CT++LRG ++ + E ER+L DA+ + R IKN +V GGGA E+ +S L+ S +I G Sbjct: 313 RVPEEDLKRTMMACGGSIQTSVNALS-SDVLGRCQVFEETQIGGERYNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPG 429
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: THSG_SULSH (Thermosome subunit gamma OS=Sulfolobus shibatae GN=thsC PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.892e-15 Identity = 43/129 (33.33%), Postives = 79/129 (61.24%), Query Frame = 3 Query: 3 KAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEK 389 K+G+ A++ ++++D +++A GA I + + ESD+G A L EV+ +G + FI K KA TV+++G++ + +E ER+L DA + RN++ P +V GGGA E ++ L++ + + G E+ Sbjct: 301 KSGIIALKNVKRSDIELLSRATGAKIASSMKDANESDLGE-AKLVEVRNLGKNKYLFIQSDK-AKAVTVIIKGSNNMVTDEAERSLNDAFNSIRNLLLEPYIVAGGGAVEEELAKRLRENAGKVPGKEQ 427
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPH_SCHPO (Probable T-complex protein 1 subunit eta OS=Schizosaccharomyces pombe GN=cct7 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 4.933e-15 Identity = 42/118 (35.59%), Postives = 67/118 (56.78%), Query Frame = 3 Query: 27 RLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEG 380 R+ D NR+ +A G I + ++E +GT FE ++IG + F C K CT++LRG + + EVER+L DA+ + ++ +KN +V GGGA E+ +S L+ S +I G Sbjct: 318 RVAADDLNRVVQAVGGSIQSTCSNIEEKHLGT-CDTFEERQIGGDRFNLFEGCPKAKTCTLILRGGADQFIAEVERSLHDAIMIVKHALKNNLVVAGGGACEMELSKYLRDYSLTISG 434
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPH_CHICK (T-complex protein 1 subunit eta OS=Gallus gallus GN=CCT7 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 4.933e-15 Identity = 43/118 (36.44%), Postives = 64/118 (54.24%), Query Frame = 3 Query: 27 RLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEG 380 R+ + D R ACG I + L + +G LFE +IG + + F C K CT++LRG ++ + E ER+L DA+ + R IKN +V GGGA E+ +S L+ S +I G Sbjct: 313 RVPEEDLKRTMMACGGSIQTSVNALSDDVLGR-CELFEEIQIGGDRYNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPG 429
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPZ_DICDI (T-complex protein 1 subunit zeta OS=Dictyostelium discoideum GN=cct6 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.442e-15 Identity = 39/129 (30.23%), Postives = 75/129 (58.14%), Query Frame = 3 Query: 3 KAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEK 389 KAG+ +RR ++ + R+ ACG +N ++L +G ++E + +G+E + F+ K+P +CTVL++G +K + +++ L+D + +N I++ +VPGGGA ++ A L + +I G K Sbjct: 309 KAGIMGLRRAKRRNMERLTLACGGTAMNSLEDLTPDCLGHADLVYE-QTLGEEKYTFVEGVKNPFSCTVLIKGPTKHQIEQIKDALRDGLRAVKNTIEDKCVVPGGGAFQIAAYADLMKFKETITGRTK 436
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPW_HUMAN (T-complex protein 1 subunit zeta-2 OS=Homo sapiens GN=CCT6B PE=1 SV=4) HSP 1 Score: 79.337 bits (194), Expect = 6.442e-15 Identity = 42/126 (33.33%), Postives = 76/126 (60.32%), Query Frame = 3 Query: 3 KAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEG 380 K G+ A+RR ++ + R++ ACG + VN ++L +G AGL +G+E F FI +C +P + T+L++G +K L +V+ ++D + +N I++ +VPG GA E+ ++ L +SI+G Sbjct: 307 KHGIVALRRAKRRNMERLSLACGGMAVNSFEDLTVDCLGH-AGLVYEYTLGEEKFTFIEECVNPCSVTLLVKGPNKHTLTQVKDAIRDGLRAIKNAIEDGCMVPGAGAIEVAMAEALVTYKNSIKG 431 The following BLAST results are available for this feature:
BLAST of CX287296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 108
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287296 ID=CX287296; Name=CX287296; organism=Citrus clementina; type=EST; length=402bpback to top |