CX287296
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPZ_CHICK (T-complex protein 1 subunit zeta OS=Gallus gallus GN=CCT6 PE=1 SV=3) HSP 1 Score: 78.9518 bits (193), Expect = 8.414e-15 Identity = 38/126 (30.16%), Postives = 74/126 (58.73%), Query Frame = 3 Query: 3 KAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEG 380 K G+ A+RR ++ + R+ ACG +N ++L +G AGL +G+E + FI C +P++ T+L+RG +K L +++ ++D + +N I++ ++PG GA E+ V+ L + +++G Sbjct: 306 KEGIVALRRAKRRNMERLTLACGGTAMNSVEDLTPDCLGH-AGLVYEYTLGEEKYTFIEKCDNPRSVTLLIRGPNKHTLTQIKDAVRDGLRAVKNAIEDGCVIPGAGALEVAVANALVKHKPNVKG 430
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: THS3_HALVO (Thermosome subunit 3 OS=Halobacterium volcanii GN=cct3 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.435e-14 Identity = 41/125 (32.80%), Postives = 73/125 (58.40%), Query Frame = 3 Query: 6 AGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEG 380 AG+ A + ++K+D +A+A GA + +L ESD+G ++ GD+ AF+ KA T+ LRG ++ ++ E+ER ++DA+ V I +VPG GATE+ ++ ++ +++ IEG Sbjct: 306 AGILAFKSVKKSDARALARATGAKRLGSLSDLDESDLGR-VDAVSIRSFGDDDLAFVEGGAAAKAVTLFLRGGTEHVVYELERAIEDAVDVVVAAIDKGGVVPGAGATEIAIADRIRSEAAGIEG 429
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPZ_SCHPO (T-complex protein 1 subunit zeta OS=Schizosaccharomyces pombe GN=cct6 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.435e-14 Identity = 37/125 (29.60%), Postives = 72/125 (57.60%), Query Frame = 3 Query: 3 KAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIE 377 K G+ A+RR ++ + R+ ACG V N D+L +G ++E + +G+E + F+ D KDPK+ T+L+ G + + +++ +D + +N +++ L+ G GA E+ +A L+ K ++ E Sbjct: 306 KNGIMALRRAKRRNMERLQLACGGVAQNSVDDLNPEVLGWAGSVYE-RTLGEEKYTFVEDVKDPKSATILIHGPNTYTIQQIQDATRDGLRAVKNAVEDNCLIVGAGAFEVACAAHLRNKFAAKE 429
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPH_PONAB (T-complex protein 1 subunit eta OS=Pongo abelii GN=CCT7 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.435e-14 Identity = 44/118 (37.29%), Postives = 63/118 (53.39%), Query Frame = 3 Query: 27 RLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEG 380 R+ + D R ACG I + L +DV +FE +IG E + F C K CT +LRG ++ + E ER+L DA+ + R IKN +V GGGA E+ +S L+ S +I G Sbjct: 313 RVPEEDLKRTMMACGGSIQTSVNALS-ADVLGRCQVFEETQIGGERYNFFTGCPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPG 429
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPH_MOUSE (T-complex protein 1 subunit eta OS=Mus musculus GN=Cct7 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.435e-14 Identity = 43/118 (36.44%), Postives = 63/118 (53.39%), Query Frame = 3 Query: 27 RLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEG 380 R+ + D R ACG I + L +G +FE +IG E + F C K CT++LRG ++ + E ER+L DA+ + R IKN +V GGGA E+ +S L+ S +I G Sbjct: 313 RVPEEDLKRTMMACGGSIQTSVNALVPDVLGH-CQVFEETQIGGERYNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPG 429
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPH_HUMAN (T-complex protein 1 subunit eta OS=Homo sapiens GN=CCT7 PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 1.435e-14 Identity = 44/118 (37.29%), Postives = 63/118 (53.39%), Query Frame = 3 Query: 27 RLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEG 380 R+ + D R ACG I + L +DV +FE +IG E + F C K CT +LRG ++ + E ER+L DA+ + R IKN +V GGGA E+ +S L+ S +I G Sbjct: 313 RVPEEDLKRTMMACGGSIQTSVNALS-ADVLGRCQVFEETQIGGERYNFFTGCPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPG 429
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: THSG_SULSO (Thermosome subunit gamma OS=Sulfolobus solfataricus GN=thsC PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.874e-14 Identity = 43/129 (33.33%), Postives = 77/129 (59.69%), Query Frame = 3 Query: 3 KAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEK 389 K G+ A++ ++++D +++A GA I + + ESD+G A L EV+ +G + FI K KA TV+++G++ + +E ER+L DA + RN++ P +V GGGA E ++ L+ + + G E+ Sbjct: 301 KNGIMALKNVKRSDIELLSRATGAKIASSMKDANESDLGE-AKLVEVRNLGKNKYLFIQSDK-AKAVTVIIKGSNNMITDEAERSLNDAFNSIRNLLLEPYIVAGGGAVEEELAKRLRDDARKVIGKEQ 427
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPW_MOUSE (T-complex protein 1 subunit zeta-2 OS=Mus musculus GN=Cct6b PE=2 SV=4) HSP 1 Score: 77.7962 bits (190), Expect = 1.874e-14 Identity = 40/126 (31.75%), Postives = 72/126 (57.14%), Query Frame = 3 Query: 3 KAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEG 380 K + A+RR ++ + R+ ACG + VN + L E +G +FE +G+E F FI DC +P + T+L++G +K L +++ L+D + +N I++ +VPG GA E+ ++ L ++G Sbjct: 307 KHNIVALRRAKRRNLERLTLACGGLAVNSFEGLSEECLGHAGLVFEYA-LGEEKFTFIEDCVNPLSVTLLVKGPNKHTLIQIKDALRDGLRAVKNAIEDGCVVPGAGAVEVAIAEALVNYKHRVQG 431
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPH_PLAF7 (T-complex protein 1 subunit eta OS=Plasmodium falciparum (isolate 3D7) GN=PFC0350c PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.123e-14 Identity = 41/116 (35.34%), Postives = 66/116 (56.90%), Query Frame = 3 Query: 27 RLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSI 374 R+ D R A A GA++ L + +GT G+FE +IG+E + +C K+ T++LRG +K + EVER++ DA+ + I N ++VPG G+ E+ +S L+ S SI Sbjct: 315 RVEDADLKRTANATGALVQTSLFNLNDDVLGT-CGVFEEVQIGNERYNIFKECLKTKSVTIILRGGAKQFIEEVERSINDAIMIVLRCITNSEIVPGAGSIEMQLSKYLRIYSRSI 429
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPA_MACFA (T-complex protein 1 subunit alpha OS=Macaca fascicularis GN=TCP1 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.303e-14 Identity = 44/134 (32.84%), Postives = 78/134 (58.21%), Query Frame = 3 Query: 3 KAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVK-----KIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEK 389 +AG A+RR+ K D RIAKA GA I++ L+ + A L + + +I D+ I + K + +++LRGA+ + +E+ER+L DA+ V + ++++ +VPGGGA E +S L+ ++S+ E+ Sbjct: 302 EAGAMAVRRVLKRDLKRIAKASGATILSTLANLEGEETFEAAMLGQAEEVVQERICDDELILIKNTKARTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQ 435 The following BLAST results are available for this feature:
BLAST of CX287296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 108
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287296 ID=CX287296; Name=CX287296; organism=Citrus clementina; type=EST; length=402bpback to top |