CX287296
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPA_TETPY (T-complex protein 1 subunit alpha OS=Tetrahymena pyriformis PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.754e-12 Identity = 42/124 (33.87%), Postives = 74/124 (59.68%), Query Frame = 3 Query: 3 KAGVSAIRRLRKTDNNRIAKACGAVIVN-----RPDELQESD-VGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLK 356 +AGV +RR+ K D R+AKA G IV DE+ E+ +G A ++E + +GD F K ++++RGA++ +++EV+R+L D++ V + +++ +VPGGGA E+ +S L+ Sbjct: 302 EAGVMGLRRVDKHDLRRLAKATGGTIVTTLATPEGDEVFEASYLGECAEVYE-EAVGDNDCIFFKGTKRANCASIIIRGANEFMVDEVDRSLHDSLCVVKRTLESGYVVPGGGAVEIALSIKLE 424
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPH_TETTH (T-complex protein 1 subunit eta (Fragment) OS=Tetrahymena thermophila PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.291e-12 Identity = 37/100 (37.00%), Postives = 57/100 (57.00%), Query Frame = 3 Query: 27 RLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGA 326 R+ D R+ K+ GA++ + L E +GT FE +IG E + DC K+ T++LRG ++ + E ER+L DA+ + R +K K+VPGGGA Sbjct: 255 RVDAEDMKRVQKSTGAIVQTTVNGLTEDVLGT-CNQFEEVQIGAERYNLFKDCPHSKSATIILRGGAEQFIAEAERSLNDAIMIVRRCMKANKIVPGGGA 353
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPE2_AVESA (T-complex protein 1 subunit epsilon OS=Avena sativa PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.291e-12 Identity = 43/127 (33.86%), Postives = 70/127 (55.12%), Query Frame = 3 Query: 18 AIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGD--EFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKW 392 A+R + + IA A G IV R EL +G AGL K G + +I C + KA T+ +RG +K ++ E +R++ DA+ VARN+I N +V GGG+ E++ S ++ + G+E++ Sbjct: 317 AVRWVGGVELELIAIATGGRIVPRFQELSTEKLGK-AGLVREKSFGTTKDRMLYIEKCANSKAVTIFIRGGNKMMIEETKRSIHDALCVARNLIINNSIVYGGGSAEISCSIAVEAAADRHPGVEQY 442
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPE1_AVESA (T-complex protein 1 subunit epsilon OS=Avena sativa PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.291e-12 Identity = 43/127 (33.86%), Postives = 70/127 (55.12%), Query Frame = 3 Query: 18 AIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGD--EFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKW 392 A+R + + IA A G IV R EL +G AGL K G + +I C + KA T+ +RG +K ++ E +R++ DA+ VARN+I N +V GGG+ E++ S ++ + G+E++ Sbjct: 317 AVRWVGGVELELIAIATGGRIVPRFQELSTEKLGK-AGLVREKSFGTTKDRMLYIEKCANSKAVTIFIRGGNKMMIEETKRSIHDALCVARNLIINNSIVYGGGSAEISCSIAVEAAADRHPGVEQY 442
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPA_PALPA (T-complex protein 1 subunit alpha OS=Paleosuchus palpebrosus GN=TCP1 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.291e-12 Identity = 40/133 (30.08%), Postives = 76/133 (57.14%), Query Frame = 3 Query: 6 AGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVK-----KIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEK 389 AG A+RR+ K D RIAKA GA + + L+ + + L + + ++ D+ I + K + +++LRGA+ + +E+ER++ DA+ V + ++++ +VPGGGA E +S L+ ++S+ E+ Sbjct: 306 AGAMAVRRVLKKDLKRIAKASGATVCSTLANLEGEESFEASMLGQAEEVVQERVCDDELILIKNTKARTSASIILRGANDFMCDEMERSIHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQ 438
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPH_ENCCU (T-complex protein 1 subunit eta OS=Encephalitozoon cuniculi GN=CCT7 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.993e-12 Identity = 40/121 (33.06%), Postives = 70/121 (57.85%), Query Frame = 3 Query: 3 KAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKS 365 K G+ R+ K D R+ +CG I+ D L E +G A LFE +++G + + + ACT++LRG +++L E+ R++ DA+ V R ++ K+V GGG+ E+ +S +++KS Sbjct: 294 KHGIFCAGRVSKEDLGRVVGSCGGSILGATDYL-EGSLGACA-LFEERQLGKFRYNYF-EGGGTSACTMILRGPGQEVLEEIGRSVHDAVCVVRTALRTRKVVTGGGSVEMELSRIIREKS 411
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPA_ENCCU (T-complex protein 1 subunit alpha OS=Encephalitozoon cuniculi GN=TCP1 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.993e-12 Identity = 45/131 (34.35%), Postives = 76/131 (58.02%), Query Frame = 3 Query: 3 KAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGL---FEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIE 386 +A V IRR +K D IAKA G +V+ ++ +D + G FEV +IG+E I K K +++LRGA+ LL+E++R++ DA+ V + +++ +VPGGGA E +S L++ + ++ E Sbjct: 307 EADVVGIRRCKKEDLLVIAKATGTSLVSSIADISGADSISSLGFADKFEVVQIGEEECVLINGLKK-KMASIILRGANCQLLDEMQRSVHDAVCVLKRTLESNSVVPGGGAVECALSLMLEKFAFTVNSKE 436
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPA1_MOUSE (T-complex protein 1 subunit alpha A OS=Mus musculus GN=Tcp1 PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 2.993e-12 Identity = 44/140 (31.43%), Postives = 76/140 (54.29%), Query Frame = 3 Query: 3 KAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIG-----------DEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEK 389 +AG A+RR+ K D +AKA GA I++ L+ G FEV +G D+ I + K + +++LRGA+ + +E+ER+L DA+ V + ++++ +VPGGGA E +S L+ ++S+ E+ Sbjct: 302 EAGAMAVRRVLKRDLKCVAKASGATILSTLANLE------GEETFEVTMLGQAEEVVQERICDDELILIKNTKARTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQ 435
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPE_CAEEL (T-complex protein 1 subunit epsilon OS=Caenorhabditis elegans GN=cct-5 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.908e-12 Identity = 42/129 (32.56%), Postives = 74/129 (57.36%), Query Frame = 3 Query: 18 AIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIG--DEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPY 398 A+R + + +A A A IV R EL + +GT AGL G + I C + KA T+ +RG +K +++E +R L DA+ V RN++++ ++V GGG+ EL + + +++ I+GIE++ + Sbjct: 320 AVRWVGGPEIELLAIATNARIVPRFSELSKEKLGT-AGLVREITFGAAKDRMLSIEQCPNNKAVTIFVRGGNKMIIDEAKRALHDALCVIRNLVRDSRIVYGGGSAELAAAIQVAKEADRIDGIEQYAF 447
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPA_MONDO (T-complex protein 1 subunit alpha OS=Monodelphis domestica GN=TCP1 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.105e-12 Identity = 41/129 (31.78%), Postives = 75/129 (58.14%), Query Frame = 3 Query: 18 AIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVK-----KIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEK 389 A+RR+ K D RIAKA GA I++ L+ + + L + + +I D+ I + K + +++LRGA+ + +E+ER+L DA+ V + ++++ +VPGGGA E +S L+ ++S+ E+ Sbjct: 307 AVRRVLKRDLKRIAKASGATILSTLASLEGEESFEASMLGQAEEVVQERICDDELILIKNTKARTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQ 435 The following BLAST results are available for this feature:
BLAST of CX287296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 108
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287296 ID=CX287296; Name=CX287296; organism=Citrus clementina; type=EST; length=402bpback to top |