CX287296
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPA_ARATH (T-complex protein 1 subunit alpha OS=Arabidopsis thaliana GN=CCT1 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.105e-12 Identity = 41/134 (30.60%), Postives = 74/134 (55.22%), Query Frame = 3 Query: 3 KAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEV-----KKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEK 389 +AG A+RR+RK D +AKA GA +V +++ + A L ++I D+ I K A +++LRGA+ +L+E+ER L DA+ + + +++ +V GGGA E +S L+ ++++ E+ Sbjct: 305 EAGAIAVRRVRKEDMRHVAKATGATLVTTFADMEGEETFDPAHLGSADEVVEERIADDDVILIKGTKTSSAVSLILRGANDYMLDEMERALHDALCIVKRTLESNTVVAGGGAVESALSVYLEHLATTLGSREQ 438
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: THS2_HALVO (Thermosome subunit 2 OS=Halobacterium volcanii GN=cct2 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.667e-12 Identity = 41/140 (29.29%), Postives = 77/140 (55.00%), Query Frame = 3 Query: 3 KAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGA-------GLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYE 401 K G+ A+RR +K+D + GA +V+ D ++ + +G + LF V+ IGD D T+LLRG++ +++E+ER +QDA+ V + + + +++ GGGA E+ +++ L+ + S+ G E+ E Sbjct: 310 KQGILAVRRTKKSDIRFLKNITGAAVVSDLDSIEAAVLGRASVRRDEAGELFYVEGIGD----------DVHGVTLLLRGSTDHVVDELERGVQDALDVVASTVADGRVLAGGGAIEVELASRLRNYADSVSGREQLAVE 439
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPA2_MOUSE (T-complex protein 1 subunit alpha B OS=Mus musculus GN=Tcp1 PE=1 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 6.667e-12 Identity = 44/140 (31.43%), Postives = 75/140 (53.57%), Query Frame = 3 Query: 3 KAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIG-----------DEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEK 389 +AG A+RR+ K D +AKA GA I++ L+ G FEV +G D+ I + K + +++LRGA+ + +E+ER+L DA+ V + +++ +VPGGGA E +S L+ ++S+ E+ Sbjct: 302 EAGAMAVRRVLKRDLKHVAKASGASILSTLANLE------GEETFEVTMLGQAEEVVQERICDDELILIKNTKARTSASIILRGANDFMCDEMERSLHDALCVVKRVLELKSVVPGGGAVEAALSIYLENYATSMGSREQ 435
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPB_YEAST (T-complex protein 1 subunit beta OS=Saccharomyces cerevisiae GN=CCT2 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.707e-12 Identity = 39/124 (31.45%), Postives = 66/124 (53.23%), Query Frame = 3 Query: 9 GVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEG 380 G+++I R+A G +V+ DE + +G + E +G++ F CK +ACT++LRGA+ L+E ER+L DA+SV K + V GGG E+ +S + ++ +I+G Sbjct: 302 GINSIEHADFEGVERLALVTGGEVVSTFDEPSKCKLGE-CDVIEEIMLGEQPFLKFSGCKAGEACTIVLRGATDQTLDEAERSLHDALSVLSQTTKETRTVLGGGCAEMVMSKAVDTEAQNIDG 424
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPE_MOUSE (T-complex protein 1 subunit epsilon OS=Mus musculus GN=Cct5 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.485e-11 Identity = 41/130 (31.54%), Postives = 73/130 (56.15%), Query Frame = 3 Query: 9 GVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGD--EFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKW 392 G+ A+R + + IA A G IV R EL +G AG+ + G + I CK+ +A T+ +RG +K ++ E +R+L DA+ V RN+I++ ++V GGGA E++ + + Q++ +E++ Sbjct: 318 GLPAVRWVGGPEIELIAIATGGRIVPRFSELTSEKLGF-AGVVQEISFGTTKDKMLVIEKCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQY 446
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPD_CANGA (T-complex protein 1 subunit delta OS=Candida glabrata GN=CCT4 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.485e-11 Identity = 37/135 (27.41%), Postives = 75/135 (55.56%), Query Frame = 3 Query: 3 KAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAF--IVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYE 401 K G+ I+ + + + ++K+ G ++ + E +G+ + E+ G + F + +V++RGA+ +L+E ER+L DA+ V R ++K L+ GGGA E+ +S L+++S S+EG+E + ++ Sbjct: 308 KLGIMVIKDIEREEIEFLSKSLGCKPISDVELFTEDRLGSADLVEEIDSDGTKIVKFSGVKGVNAKPTVSVIIRGANSMILDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLERESRSMEGVEAYIWQ 442
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPA_DICDI (T-complex protein 1 subunit alpha OS=Dictyostelium discoideum GN=tcp1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.485e-11 Identity = 38/123 (30.89%), Postives = 71/123 (57.72%), Query Frame = 3 Query: 3 KAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESD------VGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATL 353 +AG A+RR +K D RIAK+CG ++ L+ + +G + + + DE IV + K+ +++LRGA++ +L+E+ER++ D++ + + +++ +VPGGGA E +S L Sbjct: 303 EAGCMAVRRCKKEDLKRIAKSCGGTVLITLANLEGEESFDTTALGIADEVVQDRLADDELI--IVKNSNKKSASIILRGANELMLDEMERSIHDSLCIVKRTLESGTIVPGGGAVESALSIYL 423
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPE_RAT (T-complex protein 1 subunit epsilon OS=Rattus norvegicus GN=Cct5 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.940e-11 Identity = 39/129 (30.23%), Postives = 71/129 (55.04%), Query Frame = 3 Query: 9 GVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVK-KIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKW 392 G+ A+R + + IA A G IV R EL +G + E+ + I CK+ +A T+ +RG +K ++ E +R+L DA+ V RN+I++ ++V GGGA E++ + + Q++ +E++ Sbjct: 318 GLPAVRWVGGPEIELIAIATGGRIVPRFSELTSEKLGFAGVVREISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQY 446
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPE_DICDI (T-complex protein 1 subunit epsilon OS=Dictyostelium discoideum GN=cct5 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.940e-11 Identity = 39/129 (30.23%), Postives = 75/129 (58.14%), Query Frame = 3 Query: 18 AIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIG----DEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKW 392 A+R + D +IA A G IV R +++ +G AGL V+++G + + I DC + A T+ +RG +K ++ E +R++ DA+ V RN+I++ +++ GGG++E++ + + I IE++ Sbjct: 317 AVRWVGGLDLEKIAMATGGRIVARFEDVSADKLGR-AGL--VREVGFGTTQDRYLSIEDCPNTNAVTIFVRGGNKMIVEEAKRSIHDALCVTRNLIRDNRVIYGGGSSEISCGLKISAMADDIASIEQY 442
BLAST of CX287296 vs. ExPASy Swiss-Prot
Match: TCPE_YEAST (T-complex protein 1 subunit epsilon OS=Saccharomyces cerevisiae GN=CCT5 PE=1 SV=3) HSP 1 Score: 67.0106 bits (162), Expect = 3.309e-11 Identity = 38/129 (29.46%), Postives = 75/129 (58.14%), Query Frame = 3 Query: 18 AIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGD--EFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPY 398 A+R + + IA + IV R +L + +GT + ++E ++ G + I K+ K T +RG++K +++E ER L D++ V RN++K+ ++V GGGA E+T+S + +++ GI+++ + Sbjct: 342 AVRWVGGQELEHIAISTNGRIVPRFQDLSKDKLGTCSRIYE-QEFGTTKDRMLIIEQSKETKTVTCFVRGSNKMIVDEAERALHDSLCVVRNLVKDSRVVYGGGAAEVTMSLAVSEEADKQRGIDQYAF 469 The following BLAST results are available for this feature:
BLAST of CX287296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 108
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287296 ID=CX287296; Name=CX287296; organism=Citrus clementina; type=EST; length=402bpback to top |