CX287318
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_MYCBP (Malate dehydrogenase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=mdh PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 7.837e-33 Identity = 69/139 (49.64%), Postives = 92/139 (66.19%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL+ GV +D + GV++A++VG PR GMER D++ N +I+ AQ AL AA + +V V NPANTNALI AP IP + + LTRLDHNRA+ Q++ K V+D+K + IWGNHS++QYPD Sbjct: 57 ELDDCAFPLLSGVEIGSDPQKIFDGVSLALLVGARPRGAGMERSDLLEANGAIFTAQGKALNAVAADDVRVGVTGNPANTNALIAMTNAPDIPRERFSALTRLDHNRAISQLAAKTGAAVTDIKKMTIWGNHSATQYPD 195
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_MYCBO (Malate dehydrogenase OS=Mycobacterium bovis GN=mdh PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 7.837e-33 Identity = 69/139 (49.64%), Postives = 92/139 (66.19%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL+ GV +D + GV++A++VG PR GMER D++ N +I+ AQ AL AA + +V V NPANTNALI AP IP + + LTRLDHNRA+ Q++ K V+D+K + IWGNHS++QYPD Sbjct: 57 ELDDCAFPLLSGVEIGSDPQKIFDGVSLALLVGARPRGAGMERSDLLEANGAIFTAQGKALNAVAADDVRVGVTGNPANTNALIAMTNAPDIPRERFSALTRLDHNRAISQLAAKTGAAVTDIKKMTIWGNHSATQYPD 195
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_CORDI (Malate dehydrogenase OS=Corynebacterium diphtheriae GN=mdh PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 7.837e-33 Identity = 67/139 (48.20%), Postives = 91/139 (65.47%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL+D+AFPL+K +V T A A G N A +VG PR +G ER D+++ N I+ Q AL +AA + +VLVV NPANTNALI + A IPA + RLDHNR + Q+SEKL +D++ ++WGNHS+ Q+PD Sbjct: 57 ELLDSAFPLLKNIVVTDKAEVAFDGTNAAFLVGAKPRGKGEERADLLTANGKIFGPQGKALNDNAADDIRVLVVGNPANTNALIAQHAAKDIPADRFNAMMRLDHNRGIAQLSEKLGRDKNDIEKFVVWGNHSAGQFPD 195
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_XYLFA (Malate dehydrogenase OS=Xylella fastidiosa GN=mdh PE=3 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 1.024e-32 Identity = 68/139 (48.92%), Postives = 95/139 (68.35%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL+ G+V T + A ++A++VG PR GMERKD++ +N I+ AQ +AL + A + KVLVV NPANTNA I + AP + K+ T + RLDHNRAL Q+S KL+ V++++ +I+WGNHS + YPD Sbjct: 58 ELEDCAFPLLAGMVGTDNPDIAFKDADVALLVGSRPRGPGMERKDLLMENAKIFTAQGAALNKVARRDVKVLVVGNPANTNAYIAMKSAPDLNPKHFTAMLRLDHNRALSQLSTKLSKPVANIEKLIVWGNHSPTMYPD 196
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_MYCVP (Malate dehydrogenase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=mdh PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 1.024e-32 Identity = 66/139 (47.48%), Postives = 87/139 (62.59%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL+ G D A GV++A+++G PR +GMER D++ N I+ AL A+P+ +VLVV NPANTNAL+ AP IPA T LTRLDHNRA+ + V V+++ + IWGNHS +QYPD Sbjct: 60 ELEDGAFPLLAGTEIYDDPTRAFDGVDVALLIGARPRTKGMERADLLGANAEIFATSGKALNAGASPDVRVLVVGNPANTNALVASAHAPDIPADRFTALTRLDHNRAVAATARHSGVPVTEISRMTIWGNHSPTQYPD 198
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_DIAST (Malate dehydrogenase OS=Diaphorobacter sp. (strain TPSY) GN=mdh PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 1.024e-32 Identity = 68/139 (48.92%), Postives = 90/139 (64.75%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL+ G+ A +D + A + A++VG PR GMER D+++ N I+ AQ AL A+ N KVLVV NPANTNA I + AP +PAKN T + RLDHNRA Q++ K +V D+K + +WGNHS + Y D Sbjct: 59 ELEDCAFPLLAGIEAHSDPMTAFKDTDYALLVGARPRGPGMERADLLAANAQIFTAQGKALNAVASRNVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLRLDHNRAASQLAAKGGFKVGDIKKLTVWGNHSPTMYAD 197
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_ACISJ (Malate dehydrogenase OS=Acidovorax sp. (strain JS42) GN=mdh PE=3 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 1.024e-32 Identity = 68/139 (48.92%), Postives = 90/139 (64.75%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL+ G+ A +D + A + A++VG PR GMER D+++ N I+ AQ AL A+ N KVLVV NPANTNA I + AP +PAKN T + RLDHNRA Q++ K +V D+K + +WGNHS + Y D Sbjct: 59 ELEDCAFPLLAGIEAHSDPMTAFKDTDYALLVGARPRGPGMERADLLAANAQIFTAQGKALNAVASRNVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLRLDHNRAASQLAAKGGFKVGDIKKLTVWGNHSPTMYAD 197
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_RALPJ (Malate dehydrogenase OS=Ralstonia pickettii (strain 12J) GN=mdh PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.337e-32 Identity = 68/139 (48.92%), Postives = 91/139 (65.47%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 E+ D AFPL+ G+ A +D + A V++A++VG PR GMER D++S N I+ AQ AL A+ N KVLVV NPANTNA I + AP +P +N T + RLDHNRAL QI+ K VS ++ + +WGNHS + Y D Sbjct: 59 EIEDCAFPLLAGMQAHSDPMTAFKDVDVALLVGARPRGPGMERADLLSANAQIFTAQGRALNAVASRNVKVLVVGNPANTNAYIAMKSAPDLPRENFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNHSPTMYAD 197
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_RALME (Malate dehydrogenase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=mdh PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.746e-32 Identity = 67/139 (48.20%), Postives = 91/139 (65.47%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL+ GVV T D A ++A++VG PR +GMERKD++ N I+ Q AL++ A+ + KVLVV NPANTNA I + AP++ +N T + RLDHNRAL QI+ K VS ++ + +WGNHS + Y D Sbjct: 57 ELEDCAFPLLAGVVITDDPKVAFKDADVALLVGARPRSKGMERKDLLEANAQIFTVQGKALDEVASRDVKVLVVGNPANTNAYIAMKSAPNLKRENFTAMLRLDHNRALSQIAAKTGKPVSSIEKMFVWGNHSPTMYAD 195
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDHB_DICDI (Probable malate dehydrogenase 2, mitochondrial OS=Dictyostelium discoideum GN=mdhB PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.746e-32 Identity = 68/140 (48.57%), Postives = 92/140 (65.71%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHA-APNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL+KG+V + EA G + A++VG PR +GMER D++ N I+ Q AL++ A +VLVV NPANTNALI AP+I K + +TRLDHNR L Q+++K V+D++ IWGNHS++QYPD Sbjct: 76 ELDDCAFPLLKGIVQSDKPEEAFAGADYALLVGARPRSKGMERGDLLKANAEIFSVQGKALDKSANRDTLRVLVVGNPANTNALIAARNAPNIDPKRFSAMTRLDHNRGLAQLADKTGSAVTDIEKFCIWGNHSATQYPD 215 The following BLAST results are available for this feature:
BLAST of CX287318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 186
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287318 ID=CX287318; Name=CX287318; organism=Citrus clementina; type=EST; length=440bpback to top |