CX287318
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_AZOSE (Malate dehydrogenase OS=Azoarcus sp. (strain EbN1) GN=mdh PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 7.105e-26 Identity = 62/142 (43.66%), Postives = 84/142 (59.15%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSI---PAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL+ G+VAT D A + ++VG PR GMER D+++ N +I+ Q A+ ++A N KVLVV NP NTNA I A + N + RLDHNRAL Q++ K VS +K +++WGNHS + Y D Sbjct: 57 ELEDCAFPLLAGMVATDDPNVAFKDADYCLLVGARPRGPGMERADLLTANGAIFTVQGKAIAENANENVKVLVVGNPCNTNAYIAGAAARKVGRTNPNNYHGMLRLDHNRALSQLAAKTGRPVSSLKKMVVWGNHSPTMYAD 198
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_CHLMU (Malate dehydrogenase OS=Chlamydia muridarum GN=mdh PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.700e-25 Identity = 56/139 (40.29%), Postives = 77/139 (55.40%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL++ V TT +A ++ A ++G PR GMER+D++ KN I+ Q L A K+ VV NP NTN I AP + KN + RLD NR ++ + V +S V V++WGNHS+ Q PD Sbjct: 57 ELDDGAFPLLQRVQVTTSLHDAFDDIDAAFLIGSVPRGPGMERRDLLKKNGEIFATQGKVLNTAAKREAKIFVVGNPVNTNCWIAMNHAPRLLRKNFHAMLRLDQNRMHSMLAHRAEVPLSAVSQVVVWGNHSAKQVPD 195
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_CHLPN (Malate dehydrogenase OS=Chlamydia pneumoniae GN=mdh PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.526e-25 Identity = 55/139 (39.57%), Postives = 80/139 (57.55%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D A+PL+ + TT +A G++ A ++G PR GMER D++ +N I+ Q +AL A + K+ VV NP NTN I + AP + KN + RLD NR ++ + V + +V V+IWGNHS+ Q PD Sbjct: 58 ELDDGAYPLLHRLRVTTSLNDAFDGIDAAFLIGAVPRGPGMERGDLLKQNGQIFSLQGAALNTAAKRDAKIFVVGNPVNTNCWIAMKHAPRLHRKNFHAMLRLDQNRMHSMLAHRAEVPLEEVSRVVIWGNHSAKQVPD 196
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_CHLAB (Malate dehydrogenase OS=Chlamydophila abortus GN=mdh PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.605e-25 Identity = 54/139 (38.85%), Postives = 80/139 (57.55%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D A+PL++ + TT +A G++ A ++G PR GMER D++ +N I+ Q S L A + K+ VV NP NTN I AP + +N + RLD NR ++ + V + +V +V+IWGNHS+ Q PD Sbjct: 60 ELDDGAYPLLQSLRVTTSLEDAFDGIDAAFLIGAAPRGPGMERSDLLKRNGEIFSLQGSVLNTSAKRDAKIFVVGNPVNTNCWIAMSQAPRLNRRNFHSMLRLDQNRMHTMLAHRAEVPLDEVSHVVIWGNHSAKQVPD 198
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_MAGSM (Malate dehydrogenase OS=Magnetococcus sp. (strain MC-1) GN=mdh PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 4.310e-23 Identity = 59/139 (42.45%), Postives = 82/139 (58.99%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFP + V A + +A G+N +MVG PR GMER D++ N I+ Q AL + AA + + +VV NP NTN +I + +P + + + RLD NRA ++ K QV DV NV+IWGNHS++Q PD Sbjct: 56 ELQDCAFPTLAKVEAFDNPEQAFDGINWCLMVGSRPRGPGMERSDLIKINGPIFVNQGKALNR-AAQDVRAVVVGNPCNTNCMIAAHNS-DVPHERFSAMMRLDQNRAKYLLASKAGAQVIDVTNVVIWGNHSNNQVPD 192
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH1B_BRAFL (Putative malate dehydrogenase 1B OS=Branchiostoma floridae GN=MDH1B PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 9.625e-15 Identity = 45/140 (32.14%), Postives = 74/140 (52.86%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN-PANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 E+ D +FP +K + TTD A +IA+++ F + + M VS YK A A+ Q A+ + +VLV P N+ IL + PSIP +NI + ++ +A ++++L V + V +VI+WGN + Y D Sbjct: 182 EVFDLSFPFLKEISVTTDLPTAFQNAHIAIVLDDFDQGGKEDAIGDMETKVSFYKRVAEAINQTASKDIRVLVAGTGPLNSLVSILIDHTPSIPRQNIAAVAQVKERQAKSLLAKRLTVNSAGVCDVIVWGNVGGTTYTD 321 The following BLAST results are available for this feature:
BLAST of CX287318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 186
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX287318 ID=CX287318; Name=CX287318; organism=Citrus clementina; type=EST; length=440bpback to top |