CX287318
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_STRGG (Malate dehydrogenase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=mdh PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 4.744e-38 Identity = 73/139 (52.52%), Postives = 97/139 (69.78%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL++G+ T D G N+A++VG PR +GMER D+++ N I+K Q A+ HAA + KVLVV NPANTNALI + AP +PA+ T +TRLDHNRA+ Q++ K VSD+K + IWGNHS++QYPD Sbjct: 57 ELDDCAFPLLRGIEITDDPNVGFAGANVALLVGARPRTKGMERGDLLAANGGIFKPQGKAINDHAADDIKVLVVGNPANTNALIAQAAAPDVPAERFTAMTRLDHNRAISQLAAKTGAAVSDIKKLTIWGNHSATQYPD 195
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_STRCO (Malate dehydrogenase OS=Streptomyces coelicolor GN=mdh PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 8.091e-38 Identity = 74/139 (53.24%), Postives = 98/139 (70.50%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL++G+ T D A G N+A++VG PR +GMER D++ N I+K Q A+ HAA + KVLVV NPANTNALI + AP +PA+ T +TRLDHNRAL Q+++K V+D+K + IWGNHS++QYPD Sbjct: 57 ELDDCAFPLLQGIEITDDPNVAFDGANVALLVGARPRTKGMERGDLLEANGGIFKPQGKAINDHAADDIKVLVVGNPANTNALIAQAAAPDVPAERFTAMTRLDHNRALTQLAKKTGSTVADIKRLTIWGNHSATQYPD 195
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_PSYWF (Malate dehydrogenase OS=Psychrobacter sp. (strain PRwf-1) GN=mdh PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 1.057e-37 Identity = 76/139 (54.68%), Postives = 98/139 (70.50%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL+ GVV T DA A + A++VG PR GMERKD++ N +I+ AQ AL + A+ + KVLVV NPANTNALI + AP + +N T +TRLDHNR + Q++E+ N V+DVK +IIWGNHSS+QYPD Sbjct: 56 ELEDCAFPLLAGVVQTDDATVAFKDADYALLVGARPRGPGMERKDLLEANAAIFSAQGKALNEVASRDVKVLVVGNPANTNALIAQRNAPDLDPRNFTAMTRLDHNRGMAQLAEETNSTVNDVKKMIIWGNHSSTQYPD 194
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_FRASC (Malate dehydrogenase OS=Frankia sp. (strain CcI3) GN=mdh PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 1.803e-37 Identity = 73/139 (52.52%), Postives = 99/139 (71.22%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D+AFPL+ GV DA A G N+A++VG PR +GMER D++S N I+K Q A+ AA + +VLVV NPANTNALI + AP +PA+ T +TRLDHNRA+ Q+++KL V +++K + IWGNHS++QYPD Sbjct: 57 ELEDSAFPLLAGVDVFDDAKRAFEGTNVALLVGARPRTKGMERGDLLSANGGIFKPQGEAINSGAAEDIRVLVVGNPANTNALIAQTHAPDVPAERFTAMTRLDHNRAIAQLAKKLGVPSAEIKKITIWGNHSATQYPD 195
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_PSYA2 (Malate dehydrogenase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=mdh PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 2.354e-37 Identity = 76/139 (54.68%), Postives = 98/139 (70.50%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL+ G+V T DA A V+ A++VG PR GMERKD++ N +I+ AQ AL A+ + KVLVV NPANTNALI + AP + +N T +TRLDHNRA+ Q++ K + V+DVK +IIWGNHSS+QYPD Sbjct: 58 ELEDCAFPLLAGIVQTDDATVAFKDVDYALLVGSRPRGPGMERKDLLEANAAIFSAQGKALNDVASRDVKVLVVGNPANTNALIAQRNAPDLDPRNFTAMTRLDHNRAMAQLAGKTDSTVNDVKKMIIWGNHSSTQYPD 196
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_PSYCK (Malate dehydrogenase OS=Psychrobacter cryohalolentis (strain K5) GN=mdh PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 4.016e-37 Identity = 76/139 (54.68%), Postives = 98/139 (70.50%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL+ GVV T DA A V+ A++VG PR GMERKD++ N +I+ AQ AL A+ + KVLVV NPANTNA+I + AP + +N T +TRLDHNRA+ Q++ K + V+DVK +IIWGNHSS+QYPD Sbjct: 58 ELEDCAFPLLAGVVQTDDATVAFKDVDYALLVGSRPRGPGMERKDLLEANAAIFSAQGKALNDVASRDVKVLVVGNPANTNAVIAQRNAPDLDPRNFTAMTRLDHNRAMAQLAGKTDSTVNDVKKMIIWGNHSSTQYPD 196
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_FRAAA (Malate dehydrogenase OS=Frankia alni (strain ACN14a) GN=mdh PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 4.016e-37 Identity = 72/139 (51.80%), Postives = 99/139 (71.22%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D+AFPL+ GV DA A G N+A++VG PR +GMER D++S N I+K Q A+ AA + +VLVV NPANTNALI + AP +PA+ T +TRLDHNRA+ Q+++KL V ++++ + IWGNHS++QYPD Sbjct: 57 ELEDSAFPLLAGVDVFDDAKRAFEGTNVALLVGARPRTKGMERGDLLSANGGIFKPQGEAINSGAAEDIRVLVVGNPANTNALIAQTHAPDVPAERFTAMTRLDHNRAIAQLAKKLGVPSAEIRKITIWGNHSATQYPD 195
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_POLSQ (Malate dehydrogenase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=mdh PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 5.245e-37 Identity = 73/139 (52.52%), Postives = 96/139 (69.06%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL+ G+ A +D + A +++A++VG PR GMERKD++S N I+ AQ AL A KVLVV NPANTNA I + AP IPAKN T + RLDHNRAL Q++ KLN V+D++ +++WGNHS + YPD Sbjct: 59 ELEDCAFPLLAGMTAHSDPMTAFKDIDVALLVGARPRGPGMERKDLLSANAQIFTAQGKALNAVAKKTVKVLVVGNPANTNAYIAMKSAPDIPAKNFTAMLRLDHNRALSQLANKLNKPVADIEKLVVWGNHSPTMYPD 197
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_POLNS (Malate dehydrogenase OS=Polynucleobacter necessarius (strain STIR1) GN=mdh PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 6.850e-37 Identity = 73/139 (52.52%), Postives = 96/139 (69.06%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL+ G+ A +D + A +++A++VG PR GMERKD++S N I+ AQ AL A KVLVV NPANTNA I + AP IPAKN T + RLDHNRAL Q++ KLN V+D++ +++WGNHS + YPD Sbjct: 59 ELEDCAFPLLAGMTAHSDPMTAFKDIDVALLVGARPRGPGMERKDLLSANAQIFTAQGKALNVVAKKTVKVLVVGNPANTNAYIAMKSAPDIPAKNFTAMLRLDHNRALSQLANKLNKPVADIEKLVVWGNHSPTMYPD 197
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_NITEC (Malate dehydrogenase OS=Nitrosomonas eutropha (strain C91) GN=mdh PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 6.850e-37 Identity = 72/139 (51.80%), Postives = 100/139 (71.94%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL+ G++AT D + A +IA++VG PR++GMERKD++ N I++ Q L Q A + K+LVV NPANTN LI + AP +PA+N + + RLDHNRAL Q++ KLN VS++K +I+WGNHSS+Q+PD Sbjct: 56 ELQDCAFPLLAGIIATHDPMMAFDQTDIAILVGARPRRKGMERKDLLQTNGEIFRNQGKILNQVAKRDAKILVVGNPANTNTLITMKNAPDLPAENFSGMLRLDHNRALSQVAMKLNQPVSNIKKMIVWGNHSSTQFPD 194 The following BLAST results are available for this feature:
BLAST of CX287318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 186
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287318 ID=CX287318; Name=CX287318; organism=Citrus clementina; type=EST; length=440bpback to top |