CX287318
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_COXBN (Malate dehydrogenase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=mdh PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 2.203e-35 Identity = 73/139 (52.52%), Postives = 93/139 (66.91%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL+ +V T+D A VN A++VG PRK GMERKD++ KN SI+ Q A+ ++AA + ++ VV NP NTN LI AP IP +TRLD NRA+GQ++ K V V VKN+IIWGNHSS+QYPD Sbjct: 56 ELEDCAFPLLCNMVVTSDPRVAFNDVNWALLVGAAPRKAGMERKDLLEKNGSIFAGQGKAINENAASDVRIFVVGNPCNTNCLIAMNNAPDIPKDRFYAMTRLDQNRAIGQLALKAGVDVPSVKNMIIWGNHSSTQYPD 194
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_AZOSB (Malate dehydrogenase OS=Azoarcus sp. (strain BH72) GN=mdh PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 2.203e-35 Identity = 72/142 (50.70%), Postives = 97/142 (68.31%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS---IPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL+ G++AT D A +A++VG PR GMERKD++++N I+ Q +A+ Q+A P+CKVLVV NP NTNA I KE A +PAKN T + RLDHNRAL Q++ K +VS +KN+++WGNHS + Y D Sbjct: 57 ELEDCAFPLLAGMIATDDPNVAFKDAKVALLVGARPRGPGMERKDLLTENAKIFTVQGAAIGQYADPDCKVLVVGNPCNTNAYIAKEVAQKYGRVPAKNFTGMLRLDHNRALSQLAGKSGREVSSLKNLVVWGNHSPTMYAD 198
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_BORPE (Malate dehydrogenase OS=Bordetella pertussis GN=mdh PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.878e-35 Identity = 73/139 (52.52%), Postives = 94/139 (67.63%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL+ V A +D A ++A++VG PR GMERKD++S N I+ AQ AL A+ N KVLVV NPANTNA I + AP +PAKN T + RLDHNRAL Q+S K +V+D++ +I+WGNHS + YPD Sbjct: 59 ELEDCAFPLLHEVTAHSDPRTAFKDADVALLVGARPRGPGMERKDLLSVNAQIFTAQGRALNDVASRNVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLRLDHNRALSQLSAKSGKRVADIEKLIVWGNHSPTMYPD 197
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_BORPA (Malate dehydrogenase OS=Bordetella parapertussis GN=mdh PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.878e-35 Identity = 73/139 (52.52%), Postives = 94/139 (67.63%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL+ V A +D A ++A++VG PR GMERKD++S N I+ AQ AL A+ N KVLVV NPANTNA I + AP +PAKN T + RLDHNRAL Q+S K +V+D++ +I+WGNHS + YPD Sbjct: 59 ELEDCAFPLLHEVTAHSDPRTAFKDADVALLVGARPRGPGMERKDLLSVNAQIFTAQGRALNDVASRNVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLRLDHNRALSQLSAKSGKRVADIEKLIVWGNHSPTMYPD 197
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_BORBR (Malate dehydrogenase OS=Bordetella bronchiseptica GN=mdh PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.878e-35 Identity = 73/139 (52.52%), Postives = 94/139 (67.63%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL+ V A +D A ++A++VG PR GMERKD++S N I+ AQ AL A+ N KVLVV NPANTNA I + AP +PAKN T + RLDHNRAL Q+S K +V+D++ +I+WGNHS + YPD Sbjct: 59 ELEDCAFPLLHEVTAHSDPRTAFKDADVALLVGARPRGPGMERKDLLSVNAQIFTAQGRALNDVASRNVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLRLDHNRALSQLSAKSGKRVADIEKLIVWGNHSPTMYPD 197
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_BURP8 (Malate dehydrogenase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=mdh PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 4.909e-35 Identity = 70/139 (50.36%), Postives = 93/139 (66.91%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL+ GVV T D A ++A++VG PR +GMERKD++S N I+ Q AL + A+ + KVLVV NPANTNA I + AP +P KN T + RLDHNRAL Q++ K VS ++ +++WGNHS + YPD Sbjct: 57 ELEDCAFPLLAGVVVTDDPKVAFKDADVALLVGARPRSKGMERKDLLSANAEIFTVQGKALNEVASRDVKVLVVGNPANTNAYIAMKSAPDLPKKNFTAMLRLDHNRALSQLAAKSGKPVSSIEKLVVWGNHSPTMYPD 195
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_JANMA (Malate dehydrogenase OS=Janthinobacterium sp. (strain Marseille) GN=mdh PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 8.373e-35 Identity = 69/139 (49.64%), Postives = 95/139 (68.35%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 E+ D AFPL+ GV A +D + A ++A++VG PR GMERKD++ N I+ Q AL+ A+ N KVLVV NPANTNA I + AP++PAKN T + RLDHNRAL QI+ K++ V+ ++ + +WGNHS + YPD Sbjct: 59 EIDDCAFPLLAGVTAHSDPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKALDAVASRNVKVLVVGNPANTNAYIAMKSAPNLPAKNFTAMLRLDHNRALSQIAAKISKPVTSIEKLTVWGNHSPTMYPD 197
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_DEIGD (Malate dehydrogenase OS=Deinococcus geothermalis (strain DSM 11300) GN=mdh PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 8.373e-35 Identity = 71/139 (51.08%), Postives = 94/139 (67.63%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL+ +V + D + A + A++VG PRK GMER D++ N I+K Q AL + A+ + KVLVV NPANTNALI ++ AP + K T + RLDHNRA+ Q++EK VS +KN+ IWGNHSS+QYPD Sbjct: 62 ELRDCAFPLLADIVTSDDPLVAFKDADYALLVGAMPRKAGMERGDLLGANGGIFKPQGEALNKVASRDVKVLVVGNPANTNALIAQQNAPDLDPKQFTAMVRLDHNRAISQLAEKTGQPVSAIKNITIWGNHSSTQYPD 200
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_BORPD (Malate dehydrogenase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=mdh PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 8.373e-35 Identity = 71/139 (51.08%), Postives = 94/139 (67.63%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL++ V A +D A ++A++VG PR GMERKD++S N I+ AQ AL A+ N KVLVV NPANTNA I + AP +PAKN T + RLDHNRAL Q++ K V+D++ +++WGNHS + YPD Sbjct: 59 ELDDCAFPLLQEVTAHSDPRTAFKDADVALLVGARPRGPGMERKDLLSVNAQIFTAQGKALNDVASRNVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLRLDHNRALSQLAAKSGKAVADIEKLVVWGNHSPTMYPD 197
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_DEIDV (Malate dehydrogenase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=mdh PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 1.094e-34 Identity = 71/139 (51.08%), Postives = 94/139 (67.63%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D A+PL+ VV + D + A + A++VG PRK GMER D++ N I+K Q AL Q A+ + KVLVV NPANTNALI ++ AP + + T + RLDHNRA+ Q++EK VS +KN+ IWGNHSS+QYPD Sbjct: 58 ELRDGAYPLLADVVTSDDPLVAFKDADYALLVGAMPRKAGMERGDLLGANGGIFKPQGQALNQVASRDVKVLVVGNPANTNALIAQQNAPDLDPRQFTAMVRLDHNRAISQLAEKTGQPVSAIKNITIWGNHSSTQYPD 196 The following BLAST results are available for this feature:
BLAST of CX287318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 186
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287318 ID=CX287318; Name=CX287318; organism=Citrus clementina; type=EST; length=440bpback to top |