CX287325

Overview
NameCX287325
Unique NameCX287325
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length414
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: OAT2_STAAS (Ornithine aminotransferase 2 OS=Staphylococcus aureus (strain MSSA476) GN=rocD2 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.614e-13
Identity = 43/127 (33.86%), Postives = 68/127 (53.54%), Query Frame = 2
Query:    5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSP 385
            GR G +F  D  ++KPD+    KAL     PI  +L   EV +V      T G  SHG T+ G+P++CA +I AL +  + ++  +  ++   F++ +K   D P I E+RG GL +G E  ++  P
Sbjct:  233 GRSGKLFATDWDNVKPDVYILGKALGGGVFPISVVLADKEVLDVF-----TPG--SHGSTFGGNPLACAASIAALDVIVDEDLPGRSLELGDYFKEQLKQI-DHPSIKEVRGRGLFIGVELNESARP 351          
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: OAT2_STAAN (Ornithine aminotransferase 2 OS=Staphylococcus aureus (strain N315) GN=rocD2 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.614e-13
Identity = 43/127 (33.86%), Postives = 68/127 (53.54%), Query Frame = 2
Query:    5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSP 385
            GR G +F  D  ++KPD+    KAL     PI  +L   EV +V      T G  SHG T+ G+P++CA +I AL +  + ++  +  ++   F++ +K   D P I E+RG GL +G E  ++  P
Sbjct:  233 GRSGKLFATDWDNVKPDVYILGKALGGGVFPISVVLADKEVLDVF-----TPG--SHGSTFGGNPLACAASIAALDVIVDEDLPGRSLELGDYFKEQLKQI-DHPSIKEVRGRGLFIGVELNESARP 351          
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: OAT2_STAAM (Ornithine aminotransferase 2 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=rocD2 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.614e-13
Identity = 43/127 (33.86%), Postives = 68/127 (53.54%), Query Frame = 2
Query:    5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSP 385
            GR G +F  D  ++KPD+    KAL     PI  +L   EV +V      T G  SHG T+ G+P++CA +I AL +  + ++  +  ++   F++ +K   D P I E+RG GL +G E  ++  P
Sbjct:  233 GRSGKLFATDWDNVKPDVYILGKALGGGVFPISVVLADKEVLDVF-----TPG--SHGSTFGGNPLACAASIAALDVIVDEDLPGRSLELGDYFKEQLKQI-DHPSIKEVRGRGLFIGVELNESARP 351          
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: OAT2_STAAC (Ornithine aminotransferase 2 OS=Staphylococcus aureus (strain COL) GN=rocD2 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.614e-13
Identity = 43/127 (33.86%), Postives = 68/127 (53.54%), Query Frame = 2
Query:    5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSP 385
            GR G +F  D  ++KPD+    KAL     PI  +L   EV +V      T G  SHG T+ G+P++CA +I AL +  + ++  +  ++   F++ +K   D P I E+RG GL +G E  ++  P
Sbjct:  233 GRSGKLFATDWDNVKPDVYILGKALGGGVFPISVVLADKEVLDVF-----TPG--SHGSTFGGNPLACAASIAALDVIVDEDLPGRSLELGDYFKEQLKQI-DHPSIKEVRGRGLFIGVELNESARP 351          
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: BIOA_HELPY (Adenosylmethionine-8-amino-7-oxononanoate aminotransferase OS=Helicobacter pylori GN=bioA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.614e-13
Identity = 36/126 (28.57%), Postives = 69/126 (54.76%), Query Frame = 2
Query:    2 FGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKF-----QDGVKAFSDSPIIGEIRGTGLILGTE 364
            FGR G+MF  ++  IKPD +  +K +S  Y+P+ A+L   E+    ++      +F H  +Y+G+ ++CA A   L I+++ N++E+ NK    F     Q+ +K   +  ++ ++R  G++   E
Sbjct:  251 FGRTGSMFAYEQCEIKPDFLCLSKGISGGYLPLSALLTHNEIYNQFYAPYEENKAFLHSHSYTGNALACACANATLDIFEKENVIEK-NKALSGFIFNTLQNALKPLMEQQVVSDLRHLGMVFAFE 375          
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: AGT2_HUMAN (Alanine--glyoxylate aminotransferase 2, mitochondrial OS=Homo sapiens GN=AGXT2 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.614e-13
Identity = 42/140 (30.00%), Postives = 75/140 (53.57%), Query Frame = 2
Query:    2 FGRLGTMF-GCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAP----KFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPE 406
            FGRLG+ F G   + + PD+V+ AK + + + P+ A++ +PE+++ +           H  T+ G+P++CA+    L++ KE N+ E   ++      KF    K   +  I+G++RG GL++G E   +K    P P E
Sbjct:  326 FGRLGSHFWGFQTHDVLPDIVTMAKGIGNGF-PMAAVITTPEIAKSLAK------CLQHFNTFGGNPMACAIGSAVLEVIKEENLQENSQEVGTYMLLKF---AKLRDEFEIVGDVRGKGLMIGIEMVQDKISCRPLPRE 455          
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: OAT2_STAAR (Ornithine aminotransferase 2 OS=Staphylococcus aureus (strain MRSA252) GN=rocD2 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.753e-13
Identity = 43/127 (33.86%), Postives = 68/127 (53.54%), Query Frame = 2
Query:    5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSP 385
            GR G +F  D  ++KPD+    KAL     PI  +L   EV +V      T G  SHG T+ G+P++CA +I AL +  + ++  +  ++   F++ +K   D P I E+RG GL +G E  ++  P
Sbjct:  233 GRSGKLFARDWDNVKPDVYILGKALGGGVFPISVVLADKEVLDVF-----TPG--SHGSTFGGNPLACAASIAALDVIVDEDLPGRSLELGDYFKEQLKQI-DHPSIKEVRGRGLFIGVELNESARP 351          
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: ARGD_HAEDU (Acetylornithine aminotransferase OS=Haemophilus ducreyi GN=argD PE=3 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 1.046e-12
Identity = 45/124 (36.29%), Postives = 66/124 (53.23%), Query Frame = 2
Query:    5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADN 376
            GR GTMF   ++ +KPD+V+ AK L+   +PIGA L++ +V+E       TL    HG T+  +PVSCA A   L   +   + E    +  K Q   KA    P +  I G GL++G EF ++
Sbjct:  231 GRTGTMFAYQQFELKPDIVTLAKGLAGG-LPIGAFLLADKVAE-------TLAKGDHGSTFGANPVSCAAANAVLTKLEPLFLTE----VMRKGQKLRKALQSLPHVKSISGLGLMIGVEFDEH 342          
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: PAT_ERWCT (Putrescine aminotransferase OS=Erwinia carotovora subsp. atroseptica GN=patA PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.366e-12
Identity = 42/127 (33.07%), Postives = 63/127 (49.61%), Query Frame = 2
Query:    5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVK--AFSDSPIIGEIRGTGLILGTEFADNK 379
            GR G MF C+ Y ++PD++  AKAL    MPIGA + +  V  V+         F H  T+ G+P++CA A+  +     +N+ EQ          G++  A     +I E RG GL+   EF  N+
Sbjct:  278 GRTGKMFACEHYGVQPDILCLAKALGGGVMPIGATVATEAVFSVLFE-----NPFLHTTTFGGNPLACAAALATVNELLTKNLPEQAAIQGEFLLQGLQQLAAEYPQLIIEARGMGLLQAIEFRKNE 399          
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: BIOA_ECOLI (Adenosylmethionine-8-amino-7-oxononanoate aminotransferase OS=Escherichia coli (strain K12) GN=bioA PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 1.366e-12
Identity = 38/117 (32.48%), Postives = 64/117 (54.70%), Query Frame = 2
Query:    2 FGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLI 352
            FGR G +F C+   I PD++   KAL+   M + A L + EV+E I   +   G F HG T+ G+P++CA A  +L I +  +  +QV  I  + ++ +    D+ ++ ++R  G I
Sbjct:  251 FGRTGKLFACEHAEIAPDILCLGKALTGGTMTLSATLTTREVAETI--SNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVADIEVQLREQLAPARDAEMVADVRVLGAI 365          
The following BLAST results are available for this feature:
BLAST of CX287325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
OAT2_STAAS1.614e-1333.86Ornithine aminotransferase 2 OS=Staphylococcus aur... [more]
OAT2_STAAN1.614e-1333.86Ornithine aminotransferase 2 OS=Staphylococcus aur... [more]
OAT2_STAAM1.614e-1333.86Ornithine aminotransferase 2 OS=Staphylococcus aur... [more]
OAT2_STAAC1.614e-1333.86Ornithine aminotransferase 2 OS=Staphylococcus aur... [more]
BIOA_HELPY1.614e-1328.57Adenosylmethionine-8-amino-7-oxononanoate aminotra... [more]
AGT2_HUMAN1.614e-1330.00Alanine--glyoxylate aminotransferase 2, mitochondr... [more]
OAT2_STAAR2.753e-1333.86Ornithine aminotransferase 2 OS=Staphylococcus aur... [more]
ARGD_HAEDU1.046e-1236.29Acetylornithine aminotransferase OS=Haemophilus du... [more]
PAT_ERWCT1.366e-1233.07Putrescine aminotransferase OS=Erwinia carotovora ... [more]
BIOA_ECOLI1.366e-1232.48Adenosylmethionine-8-amino-7-oxononanoate aminotra... [more]

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Properties
Property NameValue
Genbank descriptionC01008C10SK Veg1 Citrus clementina cDNA clone C01008C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287325 ID=CX287325; Name=CX287325; organism=Citrus clementina; type=EST; length=414bp
ATTTGGAAGACTTGGCACAATGTTTGGTTGTGACAAATACAGCATTAAAC
CAGATCTTGTGTCCTTCGCAAAGGCCCTTTCTTCAGCATATATGCCCATT
GGAGCTATTCTTGTGAGTCCCGAAGTTTCAGAAGTCATTCACTCTCAAAG
CAACACACTTGGTTCTTTCTCTCATGGATTTACTTATTCTGGGCATCCTG
TTTCCTGTGCCGTTGCCATCGAAGCGCTTAAGATTTACAAGGAAAGAAAT
ATTGTTGAGCAAGTAAATAAGATAGCGCCAAAGTTTCAAGATGGTGTAAA
AGCCTTTTCTGATAGTCCCATCATTGGAGAGATTCGGGGCACTGGTTTGA
TTCTTGGTACAGAGTTTGCAGACAACAAGTCTCCAAATGAACCGTTCCCT
CCTGAATGGGGGAT
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