CX287325
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: PAT_ECOLU (Putrescine aminotransferase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=patA PE=3 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 5.927e-16 Identity = 41/127 (32.28%), Postives = 68/127 (53.54%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS--PIIGEIRGTGLILGTEFADNK 379 GR G MF C+ +++PD++ AKAL MPIGA + + EV V+ F H T+ G+P++CA A+ + + E+N+ Q + DG + + ++ E RG G+++ EF DN+ Sbjct: 278 GRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD-----NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNE 399
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: PAT_ECOLI (Putrescine aminotransferase OS=Escherichia coli (strain K12) GN=patA PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 5.927e-16 Identity = 41/127 (32.28%), Postives = 68/127 (53.54%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS--PIIGEIRGTGLILGTEFADNK 379 GR G MF C+ +++PD++ AKAL MPIGA + + EV V+ F H T+ G+P++CA A+ + + E+N+ Q + DG + + ++ E RG G+++ EF DN+ Sbjct: 278 GRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD-----NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNE 399
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: PAT_ECOLC (Putrescine aminotransferase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=patA PE=3 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 5.927e-16 Identity = 41/127 (32.28%), Postives = 68/127 (53.54%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS--PIIGEIRGTGLILGTEFADNK 379 GR G MF C+ +++PD++ AKAL MPIGA + + EV V+ F H T+ G+P++CA A+ + + E+N+ Q + DG + + ++ E RG G+++ EF DN+ Sbjct: 278 GRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD-----NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNE 399
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: PAT_ECOL6 (Putrescine aminotransferase OS=Escherichia coli O6 GN=patA PE=3 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 5.927e-16 Identity = 41/127 (32.28%), Postives = 68/127 (53.54%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS--PIIGEIRGTGLILGTEFADNK 379 GR G MF C+ +++PD++ AKAL MPIGA + + EV V+ F H T+ G+P++CA A+ + + E+N+ Q + DG + + ++ E RG G+++ EF DN+ Sbjct: 278 GRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD-----NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNE 399
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: PAT_ECOL5 (Putrescine aminotransferase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=patA PE=3 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 5.927e-16 Identity = 41/127 (32.28%), Postives = 68/127 (53.54%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS--PIIGEIRGTGLILGTEFADNK 379 GR G MF C+ +++PD++ AKAL MPIGA + + EV V+ F H T+ G+P++CA A+ + + E+N+ Q + DG + + ++ E RG G+++ EF DN+ Sbjct: 278 GRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD-----NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNE 399
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: PAT_ECOK1 (Putrescine aminotransferase OS=Escherichia coli O1:K1 / APEC GN=patA PE=3 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 5.927e-16 Identity = 41/127 (32.28%), Postives = 68/127 (53.54%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS--PIIGEIRGTGLILGTEFADNK 379 GR G MF C+ +++PD++ AKAL MPIGA + + EV V+ F H T+ G+P++CA A+ + + E+N+ Q + DG + + ++ E RG G+++ EF DN+ Sbjct: 278 GRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD-----NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNE 399
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: PAT_ECOHS (Putrescine aminotransferase OS=Escherichia coli O9:H4 (strain HS) GN=patA PE=3 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 5.927e-16 Identity = 41/127 (32.28%), Postives = 68/127 (53.54%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS--PIIGEIRGTGLILGTEFADNK 379 GR G MF C+ +++PD++ AKAL MPIGA + + EV V+ F H T+ G+P++CA A+ + + E+N+ Q + DG + + ++ E RG G+++ EF DN+ Sbjct: 278 GRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD-----NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNE 399
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: PAT_ECODH (Putrescine aminotransferase OS=Escherichia coli (strain K12 / DH10B) GN=patA PE=3 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 5.927e-16 Identity = 41/127 (32.28%), Postives = 68/127 (53.54%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS--PIIGEIRGTGLILGTEFADNK 379 GR G MF C+ +++PD++ AKAL MPIGA + + EV V+ F H T+ G+P++CA A+ + + E+N+ Q + DG + + ++ E RG G+++ EF DN+ Sbjct: 278 GRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD-----NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNE 399
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: PAT_ECOBW (Putrescine aminotransferase OS=Escherichia coli (strain K12 / BW2952) GN=patA PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 5.927e-16 Identity = 41/127 (32.28%), Postives = 68/127 (53.54%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS--PIIGEIRGTGLILGTEFADNK 379 GR G MF C+ +++PD++ AKAL MPIGA + + EV V+ F H T+ G+P++CA A+ + + E+N+ Q + DG + + ++ E RG G+++ EF DN+ Sbjct: 278 GRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD-----NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNE 399
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: PAT_ECO8A (Putrescine aminotransferase OS=Escherichia coli O8 (strain IAI1) GN=patA PE=3 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 5.927e-16 Identity = 41/127 (32.28%), Postives = 68/127 (53.54%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS--PIIGEIRGTGLILGTEFADNK 379 GR G MF C+ +++PD++ AKAL MPIGA + + EV V+ F H T+ G+P++CA A+ + + E+N+ Q + DG + + ++ E RG G+++ EF DN+ Sbjct: 278 GRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD-----NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNE 399 The following BLAST results are available for this feature:
BLAST of CX287325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287325 ID=CX287325; Name=CX287325; organism=Citrus clementina; type=EST; length=414bpback to top |