CX287325
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: PAT_SALA4 (Putrescine aminotransferase OS=Salmonella agona (strain SL483) GN=patA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.320e-15 Identity = 40/128 (31.25%), Postives = 69/128 (53.91%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS--PIIGEIRGTGLILGTEFADNKS 382 GR G MF C+ +++PD++ AKAL MPIGA + + EV V+ F H T+ G+P++CA A+ + + E+N+ Q + DG + + ++ + RG G+++ EF DN++ Sbjct: 278 GRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD-----NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDTLLDGFRQLAREYPNLVHDARGKGMLMAIEFVDNET 400
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: PAT_ENTS8 (Putrescine aminotransferase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=patA PE=3 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 1.320e-15 Identity = 41/128 (32.03%), Postives = 68/128 (53.12%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS--PIIGEIRGTGLILGTEFADNKS 382 GR G MF C+ +++PD++ AKAL MPIGA + + EV V+ F H T+ G+P++CA A+ + + E N+ Q + DG + + ++ E RG G+++ EF DN++ Sbjct: 278 GRTGKMFACEHENVQPDILCLAKALGGGVMPIGATVATEEVFSVLFD-----NPFLHTTTFGGNPLACAAALATIHVLLEENLPAQAEQKGDMLLDGFRQLAREYPHLVQEARGRGMLMAIEFVDNET 400
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: OAT_PLAFD (Ornithine aminotransferase OS=Plasmodium falciparum (isolate CDC / Honduras) GN=OAT PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.252e-15 Identity = 44/125 (35.20%), Postives = 68/125 (54.40%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKI-APKFQDGVKAFSDSPIIGEIRGTGLILGTEFADN 376 GR G + Y +KPD++ KALS + PI AIL + +V V L HG TY G+P++ A+ +EALK+ + E +K+ AP Q+ + DS ++ E+RG GL+ EF ++ Sbjct: 240 GRTGKLLCTHHYGVKPDVILLGKALSGGHYPISAILANDDVMLV-------LKPGEHGSTYGGNPLAAAICVEALKVLINEKLCENADKLGAPFLQNLKEQLKDSKVVREVRGKGLLCAIEFKND 357
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: OAT_PLAF7 (Ornithine aminotransferase OS=Plasmodium falciparum (isolate 3D7) GN=OAT PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.252e-15 Identity = 44/125 (35.20%), Postives = 68/125 (54.40%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKI-APKFQDGVKAFSDSPIIGEIRGTGLILGTEFADN 376 GR G + Y +KPD++ KALS + PI AIL + +V V L HG TY G+P++ A+ +EALK+ + E +K+ AP Q+ + DS ++ E+RG GL+ EF ++ Sbjct: 240 GRTGKLLCTHHYGVKPDVILLGKALSGGHYPISAILANDDVMLV-------LKPGEHGSTYGGNPLAAAICVEALKVLINEKLCENADKLGAPFLQNLKEQLKDSKVVREVRGKGLLCAIEFKND 357
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: PAT_SALPK (Putrescine aminotransferase OS=Salmonella paratyphi A (strain AKU_12601) GN=patA PE=3 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 2.942e-15 Identity = 40/128 (31.25%), Postives = 68/128 (53.12%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS--PIIGEIRGTGLILGTEFADNKS 382 GR G MF C+ +++PD++ AKAL MPIGA + + EV V+ F H T+ G+P++CA A+ + + E+N+ Q + D + + ++ E RG G+++ EF DN++ Sbjct: 278 GRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD-----NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDTLLDSFRQLAREYPNLVHEARGKGMLMAIEFVDNET 400
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: PAT_SALPA (Putrescine aminotransferase OS=Salmonella paratyphi A GN=patA PE=3 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 2.942e-15 Identity = 40/128 (31.25%), Postives = 68/128 (53.12%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS--PIIGEIRGTGLILGTEFADNKS 382 GR G MF C+ +++PD++ AKAL MPIGA + + EV V+ F H T+ G+P++CA A+ + + E+N+ Q + D + + ++ E RG G+++ EF DN++ Sbjct: 278 GRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD-----NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDTLLDSFRQLAREYPNLVHEARGKGMLMAIEFVDNET 400
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: PAT_ENT38 (Putrescine aminotransferase OS=Enterobacter sp. (strain 638) GN=patA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.942e-15 Identity = 41/127 (32.28%), Postives = 66/127 (51.97%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS--PIIGEIRGTGLILGTEFADNK 379 GR G MF C+ +++PD++ AKAL MPIGA + + EV V+ F H T+ G+P+SCA A+ + + E+N+ Q + DG ++ + RG G+++ EF DN+ Sbjct: 278 GRTGKMFACEHENVQPDILCLAKALGGGVMPIGATVATEEVFSVLFD-----NPFLHTTTFGGNPLSCAAALATINVLLEQNLPAQAEQKGDMLLDGFLQLGREYPDLVQDARGKGMLIAIEFVDNE 399
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: PAT_CITK8 (Putrescine aminotransferase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=patA PE=3 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 5.018e-15 Identity = 39/127 (30.71%), Postives = 67/127 (52.76%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS--PIIGEIRGTGLILGTEFADNK 379 GR G MF C+ +++PD++ AKAL MP+GA + + EV V+ F H T+ G+P++CA A+ + + E+N+ Q + DG + ++ + RG G+++ EF DN+ Sbjct: 278 GRTGKMFACEHENVQPDILCLAKALGGGVMPVGATIATEEVFSVLFD-----NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDMLLDGFLQLAREYPDLVQDARGKGMLMAIEFVDNE 399
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: OAT_MACCJ (Ornithine aminotransferase OS=Macrococcus caseolyticus (strain JCSC5402) GN=rocD PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.018e-15 Identity = 43/127 (33.86%), Postives = 67/127 (52.76%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSP 385 GR G MF D ++ PD+ KAL PI +L E+ EV ++ SHG T+ G+P++CAV+ AL + + + E+ ++ FQ +K D+P+I E+RG GL +G E + P Sbjct: 233 GRSGKMFATDWDNVVPDMYILGKALGGGVFPISCVLADKEILEVFNAG-------SHGSTFGGNPLACAVSNAALDVLVDEKLAERSLELGEYFQSKLKEI-DNPVIKEVRGKGLFIGVELNEAARP 351
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: OAT_STACT (Ornithine aminotransferase OS=Staphylococcus carnosus (strain TM300) GN=rocD PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.559e-15 Identity = 45/127 (35.43%), Postives = 69/127 (54.33%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSP 385 GR G F D +K D+ KAL +PI A+ EV +V T GS HG T+ G+P++ AV+I AL + ++ + E+ ++ FQD +K D+P+I E+RG GL +G E ++ P Sbjct: 233 GRSGKTFATDWDGVKLDVYILGKALGGGVLPISAVAADSEVLDVF-----TPGS--HGSTFGGNPLAAAVSIAALDVLEDEKLAERSRELGEYFQDELKKI-DNPVIKEVRGRGLFIGVELNEDARP 351 The following BLAST results are available for this feature:
BLAST of CX287325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287325 ID=CX287325; Name=CX287325; organism=Citrus clementina; type=EST; length=414bpback to top |