CX287325

Overview
NameCX287325
Unique NameCX287325
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length414
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: OAT_PLACH (Ornithine aminotransferase OS=Plasmodium chabaudi GN=OAT PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.559e-15
Identity = 43/122 (35.25%), Postives = 65/122 (53.28%), Query Frame = 2
Query:    5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGV-KAFSDSPIIGEIRGTGLILGTEF 367
            GR G +     Y++KPD+V   KALS  + PI A+L +  V  VI           HG TY G+P++ ++ +E+L +     + E  +K+   F +G+ K   DS II +IRG GL+   EF
Sbjct:  240 GRTGKLLCVHHYNVKPDVVLLGKALSGGHYPISAVLANDSVMLVIKPG-------EHGSTYGGNPLAASICVESLNVLINEKLCENADKLGGPFLEGLKKELKDSKIIRDIRGKGLLCAIEF 354          
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: OAT_BREBN (Ornithine aminotransferase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=rocD PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.559e-15
Identity = 43/128 (33.59%), Postives = 65/128 (50.78%), Query Frame = 2
Query:    2 FGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSP 385
            FGR G MF  D  ++ PD+    KAL     PI A+    E+  V           SHG T+ G+P+ CAVA+ A+ +  +  +V++  ++   F + +K   ++PII EIRG GL +G E      P
Sbjct:  232 FGRTGKMFASDWENVVPDMYIMGKALGGGVFPISAVAADKEILSVFEPG-------SHGSTFGGNPLGCAVAVAAMDVLADEGLVQRSLEMGAYFMEKLKEI-NNPIIKEIRGRGLFIGLELTTAARP 351          
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: OAT_BACSU (Ornithine aminotransferase OS=Bacillus subtilis GN=rocD PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 1.460e-14
Identity = 41/127 (32.28%), Postives = 67/127 (52.76%), Query Frame = 2
Query:    5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSP 385
            GR G  F CD   I PD+    KAL     PI  I    E+  V +  S       HG T+ G+P++CAV+I +L++ ++  + ++  ++   F+  +++  DSP+I E+RG GL +G E  +   P
Sbjct:  236 GRTGKTFACDWDGIVPDMYILGKALGGGVFPISCIAADREILGVFNPGS-------HGSTFGGNPLACAVSIASLEVLEDEKLADRSLELGEYFKSELESI-DSPVIKEVRGRGLFIGVELTEAARP 354          
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: OAT_BACC3 (Ornithine aminotransferase OS=Bacillus cereus (strain 03BB102) GN=rocD PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.460e-14
Identity = 44/133 (33.08%), Postives = 69/133 (51.88%), Query Frame = 2
Query:    5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPP 403
            GR G +F CD  ++ PD+    KAL     PI  +  + ++  V    S       HG T+ G+P++CAV+I AL++ +E  + E+  ++  K    +K   D+P+I E+RG GL +G E       NEP  P
Sbjct:  233 GRTGKVFACDWDNVTPDMYILGKALGGGVFPISCVAANRDILGVFEPGS-------HGSTFGGNPLACAVSIAALEVLEEEKLTERSLQLGEKLVGQLKEI-DNPMITEVRGKGLFIGIEL------NEPARP 351          
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: OAT_BACCQ (Ornithine aminotransferase OS=Bacillus cereus (strain Q1) GN=rocD PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.907e-14
Identity = 44/133 (33.08%), Postives = 68/133 (51.13%), Query Frame = 2
Query:    5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPP 403
            GR G +F CD   + PD+    KAL     PI  +  + ++  V    S       HG T+ G+P++CAV+I AL++ +E  + E+  ++  K    +K   D+P+I E+RG GL +G E       NEP  P
Sbjct:  233 GRTGKVFACDWDGVTPDMYILGKALGGGVFPISCVAANRDILGVFEPGS-------HGSTFGGNPLACAVSIAALEVLEEEKLTERSLQLGEKLVGQLKEI-DNPMITEVRGKGLFIGIEL------NEPARP 351          
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: OAT_EMENI (Ornithine aminotransferase OS=Emericella nidulans GN=otaA PE=3 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 2.490e-14
Identity = 42/119 (35.29%), Postives = 69/119 (57.98%), Query Frame = 2
Query:   29 CDKYS-IKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKS 382
            C ++S IKPD+V   KA+S    P+  +L   +V   +   +       HG TY G+P++CAVAI AL++ +E N+VE+  K+   F+ G++A   +PII  +RG GL+      ++K+
Sbjct:  265 CHEWSGIKPDMVLLGKAISGGMYPVSCVLGRKDVMLTVEPGT-------HGSTYGGNPLACAVAIRALEVVQEENMVERAEKLGQAFRSGLEAI-QNPIIQTVRGKGLLNAIVIDESKT 375          
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: OAT_PLAYO (Ornithine aminotransferase OS=Plasmodium yoelii yoelii GN=OAT PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.248e-14
Identity = 39/122 (31.97%), Postives = 64/122 (52.46%), Query Frame = 2
Query:    5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVK-AFSDSPIIGEIRGTGLILGTEF 367
            GR G +     Y++KPD++   KALS  + PI A+L + ++  VI           HG TY G+P++ ++ +EAL +     + E   K+   F + +K    DS I+ ++RG GL+   EF
Sbjct:  240 GRTGKLLCVHHYNVKPDVILLGKALSGGHYPISAVLANDDIMLVIKPG-------EHGSTYGGNPLAASICVEALNVLINEKLCENAEKLGGPFLENLKRELKDSKIVRDVRGKGLLCAIEF 354          
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: OAT_BACAN (Ornithine aminotransferase OS=Bacillus anthracis GN=rocD PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.248e-14
Identity = 44/133 (33.08%), Postives = 68/133 (51.13%), Query Frame = 2
Query:    5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPP 403
            GR G +F CD  ++ PD+    KAL     PI     + ++  V    S       HG T+ G+P++CAV+I AL++ +E  + E+  ++  K    +K   D+P+I E+RG GL +G E       NEP  P
Sbjct:  233 GRTGKVFACDWDNVTPDMYILGKALGGGVFPISCAAANRDILGVFEPGS-------HGSTFGGNPLACAVSIAALEVLEEEKLTERSLQLGEKLVGQLKEI-DNPMITEVRGKGLFIGIEL------NEPARP 351          
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: OAT_BACAC (Ornithine aminotransferase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=rocD PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.248e-14
Identity = 44/133 (33.08%), Postives = 68/133 (51.13%), Query Frame = 2
Query:    5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPP 403
            GR G +F CD  ++ PD+    KAL     PI     + ++  V    S       HG T+ G+P++CAV+I AL++ +E  + E+  ++  K    +K   D+P+I E+RG GL +G E       NEP  P
Sbjct:  233 GRTGKVFACDWDNVTPDMYILGKALGGGVFPISCAAANRDILGVFEPGS-------HGSTFGGNPLACAVSIAALEVLEEEKLTERSLQLGEKLVGQLKEI-DNPMITEVRGKGLFIGIEL------NEPARP 351          
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: OAT_BACAA (Ornithine aminotransferase OS=Bacillus anthracis (strain A0248) GN=rocD PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.248e-14
Identity = 44/133 (33.08%), Postives = 68/133 (51.13%), Query Frame = 2
Query:    5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPP 403
            GR G +F CD  ++ PD+    KAL     PI     + ++  V    S       HG T+ G+P++CAV+I AL++ +E  + E+  ++  K    +K   D+P+I E+RG GL +G E       NEP  P
Sbjct:  233 GRTGKVFACDWDNVTPDMYILGKALGGGVFPISCAAANRDILGVFEPGS-------HGSTFGGNPLACAVSIAALEVLEEEKLTERSLQLGEKLVGQLKEI-DNPMITEVRGKGLFIGIEL------NEPARP 351          
The following BLAST results are available for this feature:
BLAST of CX287325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
OAT_PLACH8.559e-1535.25Ornithine aminotransferase OS=Plasmodium chabaudi ... [more]
OAT_BREBN8.559e-1533.59Ornithine aminotransferase OS=Brevibacillus brevis... [more]
OAT_BACSU1.460e-1432.28Ornithine aminotransferase OS=Bacillus subtilis GN... [more]
OAT_BACC31.460e-1433.08Ornithine aminotransferase OS=Bacillus cereus (str... [more]
OAT_BACCQ1.907e-1433.08Ornithine aminotransferase OS=Bacillus cereus (str... [more]
OAT_EMENI2.490e-1435.29Ornithine aminotransferase OS=Emericella nidulans ... [more]
OAT_PLAYO4.248e-1431.97Ornithine aminotransferase OS=Plasmodium yoelii yo... [more]
OAT_BACAN4.248e-1433.08Ornithine aminotransferase OS=Bacillus anthracis G... [more]
OAT_BACAC4.248e-1433.08Ornithine aminotransferase OS=Bacillus anthracis (... [more]
OAT_BACAA4.248e-1433.08Ornithine aminotransferase OS=Bacillus anthracis (... [more]

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Properties
Property NameValue
Genbank descriptionC01008C10SK Veg1 Citrus clementina cDNA clone C01008C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287325 ID=CX287325; Name=CX287325; organism=Citrus clementina; type=EST; length=414bp
ATTTGGAAGACTTGGCACAATGTTTGGTTGTGACAAATACAGCATTAAAC
CAGATCTTGTGTCCTTCGCAAAGGCCCTTTCTTCAGCATATATGCCCATT
GGAGCTATTCTTGTGAGTCCCGAAGTTTCAGAAGTCATTCACTCTCAAAG
CAACACACTTGGTTCTTTCTCTCATGGATTTACTTATTCTGGGCATCCTG
TTTCCTGTGCCGTTGCCATCGAAGCGCTTAAGATTTACAAGGAAAGAAAT
ATTGTTGAGCAAGTAAATAAGATAGCGCCAAAGTTTCAAGATGGTGTAAA
AGCCTTTTCTGATAGTCCCATCATTGGAGAGATTCGGGGCACTGGTTTGA
TTCTTGGTACAGAGTTTGCAGACAACAAGTCTCCAAATGAACCGTTCCCT
CCTGAATGGGGGAT
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