CX287339
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287339 vs. ExPASy Swiss-Prot
Match: EIF3F_ASPTN (Eukaryotic translation initiation factor 3 subunit F OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=ATEG_08559 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.168e-19 Identity = 50/109 (45.87%), Postives = 70/109 (64.22%), Query Frame = 1 Query: 79 SSAATSNVTAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGT-VDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEF 402 S+ T+ + + P +F+I D +RR ERVIGTLLG+ DGT V+IR+++ V H E +DQV +D+EY ML HLK NP+EV+VGW++T + SALI F Sbjct: 21 SAPTTAPLNVVIQPQALFSILDHSLRRNADQERVIGTLLGTRSEDGTEVEIRSTFAVGHTETTDQVEVDMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNF 129
BLAST of CX287339 vs. ExPASy Swiss-Prot
Match: EIF3F_COCIM (Eukaryotic translation initiation factor 3 subunit F OS=Coccidioides immitis GN=CIMG_07134 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.602e-19 Identity = 53/115 (46.09%), Postives = 70/115 (60.87%), Query Frame = 1 Query: 73 GPSSAATSNVTAK----VHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGT-VDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEF 402 GP++ + TA + P IF+I D +RR ERVIGTLLG+ DGT V+IR + V H E +DQV +D+EY ML HLK NP+EV+VGW++T + SALI F Sbjct: 15 GPATVGVAPSTAPLNVVIQPQAIFSILDHSLRRNADQERVIGTLLGTRSEDGTEVEIRTCFAVGHTETTDQVEVDMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNF 129
BLAST of CX287339 vs. ExPASy Swiss-Prot
Match: EIF3F_BOMMO (Eukaryotic translation initiation factor 3 subunit F OS=Bombyx mori GN=eIF3-S5 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.887e-19 Identity = 45/102 (44.12%), Postives = 66/102 (64.71%), Query Frame = 1 Query: 97 NVTAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEF 402 N++ KVHP+V+F I D Y RR + RVIGTL G+ G V++ N + VPH E +DQV ++ Y + + + +VN E IVGW++TG VT S++IHE+ Sbjct: 4 NISVKVHPVVLFQIVDAYERRNADSHRVIGTLWGTS-DKGVVEVTNCFCVPHKEHADQVEAELNYAMDVYELNRRVNSSESIVGWWATGNEVTNHSSVIHEY 104
BLAST of CX287339 vs. ExPASy Swiss-Prot
Match: EIF3F_NEUCR (Eukaryotic translation initiation factor 3 subunit F OS=Neurospora crassa GN=1A9.200 PE=3 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 4.907e-18 Identity = 50/118 (42.37%), Postives = 72/118 (61.02%), Query Frame = 1 Query: 61 VLQFGPSSAATSNVTAKVHPLVIFNICDCYVRRPD---QAERVIGTLLGSVLPDGT-VDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEF 402 VL FG S+A +T + P +F+I D VRR D Q+ RVIG L+G DG+ V++R+++ +PH E DQV +D+EY ML LK NP+E ++GW++T + SALI F Sbjct: 19 VLGFGVSNAP---LTVNIQPQAVFSIIDHAVRRDDRDTQSTRVIGALVGVRSEDGSEVEVRSTFAIPHTENEDQVEVDVEYQKNMLALTLKANPRETLLGWYTTSHELNSFSALIQNF 133
BLAST of CX287339 vs. ExPASy Swiss-Prot
Match: EIF3F_YARLI (Eukaryotic translation initiation factor 3 subunit F OS=Yarrowia lipolytica GN=YALI0E26851g PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.435e-17 Identity = 45/109 (41.28%), Postives = 70/109 (64.22%), Query Frame = 1 Query: 79 SSAATSNVTAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGT-VDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEF 402 ++ A ++VT L F I D +RR ++ +VIGTL+G DG+ V++RN+Y VPH+E ++ +D+EY+ TML H K P+EVIVGW++T + S LIH++ Sbjct: 13 TNGAPTHVTVTAQAL--FQILDHALRREEEQSKVIGTLVGIRSEDGSEVEVRNAYAVPHSESEQEMTIDLEYNPTMLALHRKAFPKEVIVGWYATSSELNTFSGLIHDY 119
BLAST of CX287339 vs. ExPASy Swiss-Prot
Match: EIF3F_USTMA (Eukaryotic translation initiation factor 3 subunit F OS=Ustilago maydis GN=UM00175 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.435e-17 Identity = 46/99 (46.46%), Postives = 66/99 (66.67%), Query Frame = 1 Query: 112 VHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSD--QVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEF 402 VHP+ +F+I D Y+RR D RVIGTLLG+ + ++I+N + VPH E ++ QV +D+EYH +M + KV P EVIVGW++T + SALI +F Sbjct: 34 VHPVALFSILDHYLRRNDGQHRVIGTLLGT-RTESEIEIKNCFAVPHLEDAEEGQVQVDMEYHRSMYELCQKVRPDEVIVGWYATSPELNTYSALIQDF 131
BLAST of CX287339 vs. ExPASy Swiss-Prot
Match: EIF3F_MAGGR (Eukaryotic translation initiation factor 3 subunit F OS=Magnaporthe grisea GN=MGG_10653 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.336e-15 Identity = 45/111 (40.54%), Postives = 66/111 (59.46%), Query Frame = 1 Query: 82 SAATSNVTAKVHPLVIFNICDCYVRRP---DQAERVIGTLLGSVLPDGT-VDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEF 402 +A + +T + P I +I D VRR QA RVIG L+G DGT V++R+++ +PH E DQV +D+EY ML LK +P+E ++GW++T + SALI F Sbjct: 23 NANVAPLTVTIQPQAILSILDHAVRRDIRDTQATRVIGALVGVRSEDGTDVEVRSTFAIPHTENEDQVEVDVEYQKNMLALTLKASPRESLLGWYTTSHELNSFSALIQNF 133
BLAST of CX287339 vs. ExPASy Swiss-Prot
Match: EIF3F_CHAGB (Eukaryotic translation initiation factor 3 subunit F OS=Chaetomium globosum GN=CHGG_00662 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.336e-15 Identity = 41/105 (39.05%), Postives = 65/105 (61.90%), Query Frame = 1 Query: 100 VTAKVHPLVIFNICDCYVRRPD---QAERVIGTLLGSVLPDGT-VDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEF 402 +T + P +F++ D VRR Q+ RVIG L+G+ DG+ V++R+++ +PH E DQV +D+EY ML LK +P+E ++GW++T + SALI F Sbjct: 28 LTVHIQPQAVFSVIDHAVRRDTRDTQSTRVIGALVGTRSEDGSEVEVRSTFAIPHTENEDQVEVDVEYQKNMLALTLKASPRETLLGWYTTSHELNSFSALIQNF 132
BLAST of CX287339 vs. ExPASy Swiss-Prot
Match: EI3F2_DROPS (Eukaryotic translation initiation factor 3 subunit F-2 OS=Drosophila pseudoobscura pseudoobscura GN=eIF3-S5-2 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.477e-14 Identity = 44/113 (38.94%), Postives = 64/113 (56.64%), Query Frame = 1 Query: 82 SAATSNVTAKV--HPLVIFNICDCYVRRPDQAERVIGTLLGSVL-PDGTVDIRNSYVVPHNEFSDQ---VALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEF 402 S + N+ +KV HPLV+F I D Y RR V+GTLLG+V G ++I N + V H D + LD++Y + ML+ PQE ++GWFSTG V+ + +HE+ Sbjct: 2 SLSNFNLQSKVLLHPLVLFQIIDAYERRAKDVPEVLGTLLGTVAGKTGRIEITNCFSVVHRMHGDNNCHIDLDLKYDNDMLELAQIAYPQEKVLGWFSTGKSVSAAAVELHEY 114
BLAST of CX287339 vs. ExPASy Swiss-Prot
Match: EI3F2_DROPE (Eukaryotic translation initiation factor 3 subunit F-2 OS=Drosophila persimilis GN=eIF3-S5-2 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.477e-14 Identity = 45/113 (39.82%), Postives = 63/113 (55.75%), Query Frame = 1 Query: 82 SAATSNVTAKV--HPLVIFNICDCYVRRPDQAERVIGTLLGSVL-PDGTVDIRNSYVVPHNEFSDQ---VALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEF 402 S + N+ +KV HPLV+F I D Y RR V+GTLLG V G ++I N + V H D + LD++Y + ML+ PQE +VGWFSTG V+ + +HE+ Sbjct: 2 SLSNFNLQSKVLLHPLVLFQIIDAYERRAKDVPEVLGTLLGIVAGKTGRIEITNCFSVVHRMHGDNNCHIDLDLKYDNDMLELAQIAYPQEKVVGWFSTGKAVSAAAVELHEY 114 The following BLAST results are available for this feature:
BLAST of CX287339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287339 ID=CX287339; Name=CX287339; organism=Citrus clementina; type=EST; length=404bpback to top |