CX287339
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287339 vs. ExPASy Swiss-Prot
Match: EI3F2_DROSE (Eukaryotic translation initiation factor 3 subunit F-2 OS=Drosophila sechellia GN=eIF3-S5-2 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.291e-14 Identity = 42/106 (39.62%), Postives = 65/106 (61.32%), Query Frame = 1 Query: 97 NVTAKVH--PLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSD--QVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEF 402 ++ AKV PLV+F I D Y RRP +V+GTLLG D ++I N + VPH E S+ ++ LD+ Y +L+ ++ P E ++GWF TG V+ ++LIH++ Sbjct: 6 SIRAKVFLKPLVLFQIIDAYDRRPKGDNQVMGTLLGRTKEDH-IEITNCFTVPHKEHSENKRIDLDMAYASEVLELNMFAYPNERVLGWFCTGKSVSRSASLIHDY 110
BLAST of CX287339 vs. ExPASy Swiss-Prot
Match: EI3F2_DROME (Eukaryotic translation initiation factor 3 subunit F-2 OS=Drosophila melanogaster GN=eIF3-S5-2 PE=3 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 3.291e-14 Identity = 42/106 (39.62%), Postives = 66/106 (62.26%), Query Frame = 1 Query: 97 NVTAKVH--PLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSD--QVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEF 402 ++ AKV+ PLV F I D Y RRP +V+GTLLG +G ++I N + VPH E S+ ++ LD+ Y +L+ ++ P E ++GWF TG V+ ++LIH++ Sbjct: 6 SMRAKVYLKPLVFFQIIDAYDRRPKGDNQVMGTLLGRN-KEGHIEITNCFTVPHKEHSENKRIDLDMAYASEVLELNMFAYPNERVLGWFCTGKSVSRSASLIHDY 110
BLAST of CX287339 vs. ExPASy Swiss-Prot
Match: EI3F2_DROAN (Eukaryotic translation initiation factor 3 subunit F-2 OS=Drosophila ananassae GN=eIF3-S5-2 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.291e-14 Identity = 44/106 (41.51%), Postives = 63/106 (59.43%), Query Frame = 1 Query: 97 NVTAKV--HPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSD--QVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEF 402 N+ AKV PLV+F I D Y RRP A ++IGTLLG + I N + V H E D ++ LD+ Y + ML+ + PQE ++GWFSTG V+ + L+H++ Sbjct: 6 NLQAKVVLQPLVLFQIIDSYERRPKDATQIIGTLLGRS-NGKEITITNCFTVLHKEHPDSARIDLDLGYANDMLELNQLTYPQEKVLGWFSTGKSVSRSALLLHDY 110
BLAST of CX287339 vs. ExPASy Swiss-Prot
Match: EI3F2_DROER (Eukaryotic translation initiation factor 3 subunit F-2 OS=Drosophila erecta GN=eIF3-S5-2 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.332e-14 Identity = 39/99 (39.39%), Postives = 60/99 (60.61%), Query Frame = 1 Query: 112 VHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSD--QVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEF 402 + PLV+F I D Y RRP +VIGTLLG +G +I N + VPH E + ++ LDI Y +L+ ++ P E ++GWF TG V+ ++L+H++ Sbjct: 13 IKPLVLFQIIDSYERRPKGDNQVIGTLLGRN-KEGHFEITNCFTVPHKEHPEINRIDLDIAYASEILELNMLTYPNERVLGWFCTGKSVSRSASLLHDY 110
BLAST of CX287339 vs. ExPASy Swiss-Prot
Match: EI3F2_DROWI (Eukaryotic translation initiation factor 3 subunit F-2 OS=Drosophila willistoni GN=eIF3-S5-2 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.251e-13 Identity = 37/100 (37.00%), Postives = 63/100 (63.00%), Query Frame = 1 Query: 112 VHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPD-GTVDIRNSYVVPHNEF--SDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEF 402 + PLV+ +I D Y RRP +VIGTLLG P+ G ++I N + + H ++ SD++ +D++Y + M + + PQE I+GW++TG V+ + +HE+ Sbjct: 13 LQPLVLLHIIDAYERRPKDCTQVIGTLLGRNNPESGHLEISNCFTLLHKDYPNSDRIDVDLQYANDMYELNQLTYPQEKIIGWYATGKEVSRSAVNLHEY 112
BLAST of CX287339 vs. ExPASy Swiss-Prot
Match: EI3F2_DROSI (Eukaryotic translation initiation factor 3 subunit F-2 OS=Drosophila simulans GN=eIF3-S5-2 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.251e-13 Identity = 39/97 (40.21%), Postives = 60/97 (61.86%), Query Frame = 1 Query: 118 PLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSD--QVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEF 402 PLV+F I D Y RRP +V+GTLLG D ++I N + VPH E S+ ++ LD+ Y +L+ ++ P E ++GWF TG V+ ++LIH++ Sbjct: 15 PLVLFQIIDAYDRRPKGDNQVMGTLLGRNKEDH-IEITNCFTVPHKEHSENKRIDLDMTYASEVLELNMFAYPNERVLGWFCTGKSVSRSASLIHDY 110
BLAST of CX287339 vs. ExPASy Swiss-Prot
Match: EI3F2_DROYA (Eukaryotic translation initiation factor 3 subunit F-2 OS=Drosophila yakuba GN=eIF3-S5-2 PE=3 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 4.753e-13 Identity = 38/99 (38.38%), Postives = 59/99 (59.60%), Query Frame = 1 Query: 112 VHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSD--QVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEF 402 + PLV+F I D Y RRP +V+GTLLG +G +I N + VPH E + ++ LDI Y L+ ++ E ++GWFSTG V+ ++L+H++ Sbjct: 13 IKPLVLFQIIDAYERRPKGDNQVMGTLLGRN-KEGHFEITNCFPVPHKEHPEINRIDLDISYASEFLELNMLTYSNERVLGWFSTGKSVSRSASLLHDY 110
BLAST of CX287339 vs. ExPASy Swiss-Prot
Match: EIF3F_CAEEL (Eukaryotic translation initiation factor 3 subunit F OS=Caenorhabditis elegans GN=eif-3.F PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.359e-12 Identity = 34/109 (31.19%), Postives = 60/109 (55.05%), Query Frame = 1 Query: 94 SNVTAKVHPLVIFNICDCYVRRPDQA------ERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEF 402 SN+T VHP V N+ D ++RR + E+ +GTL+G G++ + N + +P NE +D + +D +++ M+ + K +P E VGWF T +T + H++ Sbjct: 3 SNLTVNVHPGVYMNVVDTHMRRTKSSAKNTGQEKCMGTLMG-YYEKGSIQVTNCFAIPFNESNDDLEIDDQFNQQMISALKKTSPNEQPVGWFLTTSDITSSCLIYHDY 110
BLAST of CX287339 vs. ExPASy Swiss-Prot
Match: EI3F2_DROGR (Eukaryotic translation initiation factor 3 subunit F-2 OS=Drosophila grimshawi GN=eIF3-S5-2 PE=3 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 5.255e-12 Identity = 40/103 (38.83%), Postives = 58/103 (56.31%), Query Frame = 1 Query: 109 KVHPLVIFNICDCYVRRPDQAERVIGTLLG-SVLPDGTVDIRNSYVVPHNEFS----DQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEF 402 ++ PLV+F I Y RP AE +GTLLG + T++I NSY+V H +QV LD +Y M + + NPQE IVGW++T ++ SA +H + Sbjct: 13 RLQPLVLFQIISAYEHRPKLAEVAVGTLLGLRDRSNDTIEITNSYMVIHKTQQIGEMEQVKLDKQYASEMYELNQINNPQEKIVGWYNTAKSLSRSSAALHAY 115
BLAST of CX287339 vs. ExPASy Swiss-Prot
Match: EI3F2_DROVI (Eukaryotic translation initiation factor 3 subunit F-2 OS=Drosophila virilis GN=eIF3-S5-2 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.863e-12 Identity = 38/103 (36.89%), Postives = 57/103 (55.34%), Query Frame = 1 Query: 109 KVHPLVIFNICDCYVRRPDQAERVIGTLLGSV-LPDGTVDIRNSYVVPHNEFS----DQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEF 402 ++ PLV+F I Y RRP A+ +GTLLG + ++I NSY V H E +Q LD +Y M + + PQE I+GW+STG ++ +A +H + Sbjct: 13 RLQPLVLFQIIAAYERRPKTAKMAVGTLLGRRDRCNDIIEITNSYTVQHKEQQIGEMEQFKLDTQYASEMFELNQITYPQEKIIGWYSTGKSLSRSAAALHAY 115 The following BLAST results are available for this feature:
BLAST of CX287339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287339 ID=CX287339; Name=CX287339; organism=Citrus clementina; type=EST; length=404bpback to top |