CX287339
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287339 vs. ExPASy Swiss-Prot
Match: PSD7_ARATH (Probable 26S proteasome non-ATPase regulatory subunit 7 OS=Arabidopsis thaliana GN=RPN8 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.963e-12 Identity = 39/88 (44.32%), Postives = 52/88 (59.09%), Query Frame = 1 Query: 112 VHPLVIFNICDCYVR-RPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVA---LDIEYHHTMLKSHLKVNPQEVIVGWFSTG 363 VHPLV+ +I D Y R D ++RV+G LLGS G VD+ NSY VP E + LD YH +M ++N +E +VGW+STG Sbjct: 19 VHPLVLLSIVDHYNRVAKDSSKRVVGVLLGSS-SRGVVDVTNSYAVPFEEDDKDPSIWFLDHNYHESMFHMFKRINAKEHVVGWYSTG 105
BLAST of CX287339 vs. ExPASy Swiss-Prot
Match: EI3F2_DROMO (Eukaryotic translation initiation factor 3 subunit F-2 OS=Drosophila mojavensis GN=eIF3-S5-2 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.448e-11 Identity = 37/103 (35.92%), Postives = 56/103 (54.37%), Query Frame = 1 Query: 109 KVHPLVIFNICDCYVRRPDQAERVIGTLLGSV-LPDGTVDIRNSYVVPHNEFS----DQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEF 402 ++ PLV+F I Y RRP A+ +GTLLG + ++I NSY V H E +Q LD +Y M + + PQE I+GW+ TG ++ +A +H + Sbjct: 13 RLQPLVLFQIIAAYERRPKTAKMAVGTLLGRRDRCNDIIEITNSYTVQHKEQQIGDMEQFKLDTQYASEMFELNQVTYPQEKIIGWYCTGKTLSRSAAALHGY 115
BLAST of CX287339 vs. ExPASy Swiss-Prot
Match: EIF3F_CRYNE (Eukaryotic translation initiation factor 3 subunit F OS=Cryptococcus neoformans GN=CNF04540 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.810e-11 Identity = 44/119 (36.97%), Postives = 66/119 (55.46%), Query Frame = 1 Query: 64 LQFGPSSAAT---SNVTAKVHPLVIFNICDCYVRRPDQAE--RVIGTLLGSVLPDGT-VDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEF 402 LQ P+S++ S +T VHP VI I + R +E RVIG L+G+ +G VDIR+ + VPH E Q+++D + M+ K +EVIVGW+++ V SA+I E+ Sbjct: 12 LQLPPTSSSLRPPSQIT--VHPSVIAQILTHHSRHSADSESTRVIGALMGNRSDNGQEVDIRSCFAVPHTEQGQQISVDRPFQQDMVNFLAKNGTKEVIVGWYASQKTVNSNSAIIQEY 128 The following BLAST results are available for this feature:
BLAST of CX287339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287339 ID=CX287339; Name=CX287339; organism=Citrus clementina; type=EST; length=404bpback to top |