CX287340

Overview
NameCX287340
Unique NameCX287340
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length415
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 4.675e-29
Identity = 62/138 (44.93%), Postives = 98/138 (71.01%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKL-LGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTN-RNAEGVLDPRLQEKPCSRALKRALLVA 410
            H+ + P V++RD+K SNILL + + PKLSDFGLAK+    ++++V+TRVMGT+GY AP+YA TG L  +SD+YSFG++++E+I+GR  +D ++   + NLV W + +  + RN   ++DP LQ +   R L +AL ++
Sbjct:  219 HDRMTPPVIYRDLKCSNILLGEDYQPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNTKTRKDQNLVGWARPLFKDRRNFPKMVDPLLQGQYPVRGLYQALAIS 356          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 6.105e-29
Identity = 65/138 (47.10%), Postives = 93/138 (67.39%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK-LLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVAL 413
            H G EP+++HRD+KSSNILLDK  N K+SDFGL+K    A+ S++TT V GT GY+ PEY ST  L E+SDVYSFG++++E+I GR P+ +S  P   NLV W +  +    A  ++D  L+E     ++K+A  +A+
Sbjct:  721 HNGSEPRIIHRDVKSSNILLDKDMNAKVSDFGLSKQFTKADASHITTVVKGTAGYLDPEYYSTLQLTEKSDVYSFGVVLLELICGREPLSHSGSPDSFNLVLWARPNL-QAGAFEIVDDILKETFDPASMKKAASIAI 857          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: RPK1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RPK1 OS=Arabidopsis thaliana GN=RPK1 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.041e-28
Identity = 68/139 (48.92%), Postives = 90/139 (64.75%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVD--YSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVAL 413
            HE   PKV+HRDIK SNILLD  +N  LSDFGL+KLLG  +S+VTT V GTFGYVAPEYA T  ++E++DVYS+GI+++E+IS +  +D  +S      N+V W   M++   A+ V    L E      L   L +AL
Sbjct:  374 HEQCSPKVLHRDIKPSNILLDNNYNAYLSDFGLSKLLGTSQSHVTTGVAGTFGYVAPEYAMTCRVSEKADVYSYGIVLLELISDKRALDPSFSSHENGFNIVSWAHMMLSQGKAKEVFTTGLWETGPPDDLVEVLHLAL 512          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 124.79 bits (312), Expect = 1.360e-28
Identity = 56/136 (41.18%), Postives = 88/136 (64.71%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVA 410
            HEG +P ++HRDIKSSNILLD+ +N  L+DFGLA+L+    ++V+T ++GT GY+ PEY    +   + DVYSFG++++E+++ + PVD  +P G  +L+ W+  M     A  V DP +  K   + + R L +A
Sbjct:  849 HEGCDPHILHRDIKSSNILLDENFNSHLADFGLARLMSPYETHVSTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTDKRPVDMCKPKGCRDLISWVVKMKHESRASEVFDPLIYSKENDKEMFRVLEIA 984          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 3.957e-28
Identity = 59/121 (48.76%), Postives = 88/121 (72.73%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGR-NPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRL 362
            HE    K+VHRDIK++N+LLDKQ NPK+SDFGLAKL   + ++++TR+ GTFGY+APEYA  G L +++DVYSFGI+ +E++ GR N ++ S+      L++W++ +    N   ++DPRL
Sbjct:  739 HEESRLKIVHRDIKATNVLLDKQLNPKISDFGLAKLDEEDSTHISTRIAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVHGRSNKIERSK-NNTFYLIDWVEVLREKNNLLELVDPRL 858          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 3.957e-28
Identity = 57/139 (41.01%), Postives = 98/139 (70.50%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSR--PPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVAL 413
            H+  +PK++HRD+K++NILLD+++   + DFGLAKL+  + ++VTT V GT G++APEY STG  +E++DV+ +GI+++E+I+G+   D +R     +V L++W+K ++  +  E ++DP LQ     R L++ + VAL
Sbjct:  418 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQTNYEERELEQVIQVAL 556          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.375e-27
Identity = 54/139 (38.85%), Postives = 97/139 (69.78%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSR--PPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVAL 413
            H+  +PK++HRD+K++NILLD+++   + DFGLA+L+  + ++VTT V GT G++APEY STG  +E++DV+ +GI+++E+I+G+   D +R     +V L++W+K ++  +  E ++DP LQ       +++ + VAL
Sbjct:  421 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLARLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQSNYTEAEVEQLIQVAL 559          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: PSYR1_ARATH (Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 7.463e-27
Identity = 58/136 (42.65%), Postives = 87/136 (63.97%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVA 410
            H+  EP +VHRDIKSSNILLD  +   ++DFGL++L+   R++VTT ++GT GY+ PEY    +   R DVYSFG++++E+++G+ P++  RP     LV W+ TM  +   E V D  L+E     A+ R L +A
Sbjct:  918 HQICEPHIVHRDIKSSNILLDGNFKAYVADFGLSRLILPYRTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGKRPMEVFRPKMSRELVAWVHTMKRDGKPEEVFDTLLRESGNEEAMLRVLDIA 1053          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: Y2197_ARATH (Probable protein kinase At2g41970 OS=Arabidopsis thaliana GN=At2g41970 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.273e-26
Identity = 55/137 (40.15%), Postives = 90/137 (65.69%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYV-TTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVA 410
            HE ++P +VHRD++SSN+LL   +  K++DF L        + + +TRV+GTFGY APEYA TG + ++SDVYSFG++++E+++GR PVD++ P G+ +LV W    ++    +  +DP+L      +A+ +   VA
Sbjct:  193 HEKVQPPIVHRDVRSSNVLLFDDFVAKMADFNLTNASSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCIDPKLNNDFPPKAVAKLAAVA 329          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: Y1755_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.273e-26
Identity = 57/124 (45.97%), Postives = 88/124 (70.97%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK--LLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQE 368
            H G +PK+VHRD+KS+NILL +++  K++DFGL++  L+G E     T V GTFGY+ PEY  T +L+ +SDVYSFG++++E+ISG++ +D SR     N+VEW   ++ N + E ++DP L +
Sbjct:  673 HTGCKPKIVHRDVKSTNILLSEEFEAKIADFGLSRSFLIGNEAQ--PTVVAGTFGYLDPEYHKTSLLSMKSDVYSFGVVLLEIISGQDVIDLSRE--NCNIVEWTSFILENGDIESIVDPNLHQ 792          
The following BLAST results are available for this feature:
BLAST of CX287340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 289
Match NameE-valueIdentityDescription
RLCK7_ARATH4.675e-2944.93Probable serine/threonine-protein kinase RLCKVII O... [more]
Y5487_ARATH6.105e-2947.10Probable LRR receptor-like serine/threonine-protei... [more]
RPK1_ARATH1.041e-2848.92Probable LRR receptor-like serine/threonine-protei... [more]
PSKR1_ARATH1.360e-2841.18Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
Y1534_ARATH3.957e-2848.76Probable LRR receptor-like serine/threonine-protei... [more]
SERK1_ARATH3.957e-2841.01Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
SERK2_ARATH4.375e-2738.85Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
PSYR1_ARATH7.463e-2742.65Tyrosine-sulfated glycopeptide receptor 1 OS=Arabi... [more]
Y2197_ARATH1.273e-2640.15Probable protein kinase At2g41970 OS=Arabidopsis t... [more]
Y1755_ARATH1.273e-2645.97Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC01008E02SK Veg1 Citrus clementina cDNA clone C01008E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287340 ID=CX287340; Name=CX287340; organism=Citrus clementina; type=EST; length=415bp
TGCATGAGGGGCTTGAACCAAAGGTTGTTCACCGTGACATCAAGTCAAGC
AACATTTTGCTCGATAAGCAGTGGAATCCGAAATTATCCGATTTTGGCCT
AGCAAAGCTTTTGGGCGCAGAGAGGAGCTACGTGACAACTCGTGTGATGG
GAACATTCGGGTATGTGGCACCAGAATATGCTAGCACTGGGATGTTGAAT
GAAAGAAGCGATGTATACAGTTTTGGTATCCTTATCATGGAAGTAATTTC
TGGTAGAAATCCAGTGGATTACAGCCGCCCTCCAGGGGAGGTGAATTTAG
TTGAGTGGCTCAAAACAATGGTCACAAATCGCAATGCAGAGGGTGTTTTG
GATCCTAGGTTGCAAGAGAAGCCTTGTTCAAGGGCATTGAAGCGTGCTCT
TTTAGTAGCTTTACG
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