CX287340

Overview
NameCX287340
Unique NameCX287340
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length415
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 1.610e-21
Identity = 54/139 (38.85%), Postives = 85/139 (61.15%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTT-RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISG-RNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVAL 413
            H+     ++HRD+K+SNILLD    PK++DFG+A++ G ++S   T R+ GTFGY+ PEY   G  + +SDVYSFG+LI+E+I G +N   Y       NLV ++  + TN +   ++D  + E   +  + R + +AL
Sbjct:  481 HQDSRLTIIHRDLKASNILLDADMIPKIADFGMARISGIDQSVANTKRIAGTFGYMPPEYVIHGQFSMKSDVYSFGVLILEIICGKKNRSFYQADTKAENLVTYVWRLWTNGSPLELVDLTISENCQTEEVIRCIHIAL 619          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: Y5596_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g59680 OS=Arabidopsis thaliana GN=At5g59680 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.103e-21
Identity = 55/139 (39.57%), Postives = 93/139 (66.91%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKL--LGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVAL 413
            H G  P +VHRD+K++NILLD+ +  KL+DFGL++   +G E S+V+T + GT GY+ PEY  T  L+E+SDVYSFGI+++E+I+ +  +D +R   + ++ +W+ + +   +   ++D +L     SR+  RAL +A+
Sbjct:  694 HIGCTPPMVHRDVKTTNILLDEHYKAKLADFGLSRSFPVGGE-SHVSTVIAGTPGYLDPEYYHTSRLSEKSDVYSFGIVLLEMITNQAVIDRNR--RKSHITQWVGSELNGGDIAKIMDLKLNGDYDSRSAWRALELAM 829          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: CRK13_ARATH (Cysteine-rich receptor-like protein kinase 13 OS=Arabidopsis thaliana GN=CRK13 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.103e-21
Identity = 50/138 (36.23%), Postives = 83/138 (60.14%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSY-VTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVAL 413
            H+  +P ++HRD+K+ NILLD   NPK++DFG A++ G ++S  +T    GT GY+APEY   G  + +SDVYS+G+L++E+I G+    +S P    N V ++  +  +     ++D  + E   S  + R + +AL
Sbjct:  472 HQDSQPTIIHRDLKAGNILLDAHMNPKVADFGTARIFGMDQSVAITANAAGTPGYMAPEYMELGEFSMKSDVYSYGVLVLEIICGKRNTSFSSP--VQNFVTYVWRLWKSGTPLNLVDATIAENYKSEEVIRCIHIAL 607          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.103e-21
Identity = 46/121 (38.02%), Postives = 77/121 (63.64%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVM-GTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRL 362
            H    P ++HRD+KSSN+LLD+ +  ++SDFG+A+L+ A  ++++   + GT GYV PEY  +     + DVYS+G++++E++SG+ P+D      + NLV W K +   +    +LDP L
Sbjct:  974 HHSCIPHIIHRDMKSSNVLLDQDFVARVSDFGMARLVSALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKPIDPEEFGEDNNLVGWAKQLYREKRGAEILDPEL 1094          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.747e-21
Identity = 47/120 (39.17%), Postives = 75/120 (62.50%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRL 362
            H G    ++HRD+K++NILLD+    K+SDFGL+K    +  +V+T V G+FGY+ PEY     L ++SDVYSFG+++ EV+  R  ++   P  +VNL E+   +      E ++DP++
Sbjct:  644 HTGAAQGIIHRDVKTTNILLDENLVAKVSDFGLSKDAPMDEGHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPVINPQLPREQVNLAEYAMNLHRKGMLEKIIDPKI 763          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: CRK32_ARATH (Putative cysteine-rich receptor-like protein kinase 32 OS=Arabidopsis thaliana GN=CRK32 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.747e-21
Identity = 53/139 (38.13%), Postives = 85/139 (61.15%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTR-VMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISG-RNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVAL 413
            H+     ++HRDIK+SNILLD   NPK++DFG+A+    +++   TR V+GTFGY+ PEY + G  + +SDVYSFG+LI+E++ G +N   Y       NLV  +  +  N +   ++DP ++E   +  + R + + L
Sbjct:  443 HQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNFRVDQTEDNTRRVVGTFGYMPPEYVTHGQFSTKSDVYSFGVLILEIVCGKKNSSFYKIDDSGGNLVTHVWRLWNNDSPLDLIDPAIEESCDNDKVIRCIHIGL 581          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: CRK2_ARATH (Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=CRK2 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.747e-21
Identity = 48/123 (39.02%), Postives = 74/123 (60.16%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEK 371
            HE    K++HRDIK+SNILLD +   K++DFGLA+    ++S+++T + GT GY+APEY + G L E  DVYSFG+L++E+++G+            +L+        +   E + DP L  K
Sbjct:  439 HEQSSVKIIHRDIKASNILLDSKLQAKIADFGLARSFQDDKSHISTAIAGTLGYMAPEYLAHGQLTEMVDVYSFGVLVLEIVTGKQNTKSKMSDYSDSLITEAWKHFQSGELEKIYDPNLDWK 561          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.747e-21
Identity = 50/125 (40.00%), Postives = 81/125 (64.80%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYV---TTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGR--NPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRL 362
            HE    +++HRD+K+SNILLD++ NPK++DFGLAKL  + ++     T+R+ GT+GY+APEYA  G  + ++DV+SFG+L++E+I+G+  N    +      +L+ W+           V+DP L
Sbjct:  471 HEDSRFRIIHRDLKASNILLDQEMNPKIADFGLAKLFDSGQTMTHRFTSRIAGTYGYMAPEYAMHGQFSVKTDVFSFGVLVIEIITGKRNNNGGSNGDEDAEDLLSWVWRSWREDTILSVIDPSL 595          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.588e-21
Identity = 54/125 (43.20%), Postives = 77/125 (61.60%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE--RSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEK 371
            H G    V+HRD+KS+NILLD+    K++DFGL+K  G E  +++V+T V G+FGY+ PEY     L E+SDVYSFG+++ EV+  R  +D +     VNL EW          E ++DP L+ K
Sbjct:  595 HTGDAKPVIHRDVKSANILLDENLMAKVADFGLSKT-GPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVMFEVLCARPVIDPTLTREMVNLAEWAMKWQKKGQLEHIIDPSLRGK 718          
BLAST of CX287340 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.588e-21
Identity = 54/139 (38.85%), Postives = 85/139 (61.15%), Query Frame = 3
Query:    3 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTR-VMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISG-RNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVAL 413
            H     K++HRD+K+SNILLD +  PK++DFG+A++   ++S   TR V+GT GY++PEY   G  + +SDVYSFG+L++E+ISG RN   +       NLV +      N +   ++D  L++   S  + R + +AL
Sbjct:  435 HHDSPLKIIHRDLKASNILLDAEMEPKVADFGMARIFRVDQSRADTRRVVGTHGYISPEYLMHGQFSVKSDVYSFGVLVLEIISGKRNSNFHETDESGKNLVTYAWRHWRNGSPLELVDSELEKNYQSNEVFRCIHIAL 573          
The following BLAST results are available for this feature:
BLAST of CX287340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 289
Match NameE-valueIdentityDescription
CRK12_ARATH1.610e-2138.85Putative cysteine-rich receptor-like protein kinas... [more]
Y5596_ARATH2.103e-2139.57Probable LRR receptor-like serine/threonine-protei... [more]
CRK13_ARATH2.103e-2136.23Cysteine-rich receptor-like protein kinase 13 OS=A... [more]
BRL3_ARATH2.103e-2138.02Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
Y5613_ARATH2.747e-2139.17Probable receptor-like protein kinase At5g61350 OS... [more]
CRK32_ARATH2.747e-2138.13Putative cysteine-rich receptor-like protein kinas... [more]
CRK2_ARATH2.747e-2139.02Cysteine-rich receptor-like protein kinase 2 OS=Ar... [more]
CRK29_ARATH2.747e-2140.00Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
Y5597_ARATH3.588e-2143.20Probable receptor-like protein kinase At5g59700 OS... [more]
CRK33_ARATH3.588e-2138.85Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionC01008E02SK Veg1 Citrus clementina cDNA clone C01008E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287340 ID=CX287340; Name=CX287340; organism=Citrus clementina; type=EST; length=415bp
TGCATGAGGGGCTTGAACCAAAGGTTGTTCACCGTGACATCAAGTCAAGC
AACATTTTGCTCGATAAGCAGTGGAATCCGAAATTATCCGATTTTGGCCT
AGCAAAGCTTTTGGGCGCAGAGAGGAGCTACGTGACAACTCGTGTGATGG
GAACATTCGGGTATGTGGCACCAGAATATGCTAGCACTGGGATGTTGAAT
GAAAGAAGCGATGTATACAGTTTTGGTATCCTTATCATGGAAGTAATTTC
TGGTAGAAATCCAGTGGATTACAGCCGCCCTCCAGGGGAGGTGAATTTAG
TTGAGTGGCTCAAAACAATGGTCACAAATCGCAATGCAGAGGGTGTTTTG
GATCCTAGGTTGCAAGAGAAGCCTTGTTCAAGGGCATTGAAGCGTGCTCT
TTTAGTAGCTTTACG
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